RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 ITIH2P19823 946 aa4.13□□□□□ -1.75
CD44-234ENST00000531873 FAM50AQ14320 339 aaKnown RBP4.13□□□□□ -1.75
CD44-234ENST00000531873 TESK1Q15569 626 aa4.13□□□□□ -1.75
CD44-234ENST00000531873 ACBD5Q5T8D3 534 aaPredicted RBP4.13□□□□□ -1.75
CD44-234ENST00000531873 ABHD17CQ6PCB6 329 aa4.13□□□□□ -1.75
CD44-234ENST00000531873 PAOXQ6QHF9 649 aa4.13□□□□□ -1.75
CD44-234ENST00000531873 ZAR1Q86SH2 424 aa4.13□□□□□ -1.75
CD44-234ENST00000531873 PPIL6Q8IXY8 311 aa4.13□□□□□ -1.75
CD44-234ENST00000531873 MFSD4AQ8N468 514 aa4.13□□□□□ -1.75
CD44-234ENST00000531873 GPR62Q9BZJ7 368 aa4.13□□□□□ -1.75
CD44-234ENST00000531873 KCNF1Q9H3M0 494 aa4.13□□□□□ -1.75
CD44-234ENST00000531873 CHPF2Q9P2E5 772 aa4.13□□□□□ -1.75
CD44-234ENST00000531873 CCDC39Q9UFE4 941 aa4.13□□□□□ -1.75
CD44-234ENST00000531873 KCNH3Q9ULD8 1083 aa4.13□□□□□ -1.75
CD44-234ENST00000531873 ANGEL1Q9UNK9 670 aaKnown RBP4.13□□□□□ -1.75
CD44-234ENST00000531873 ALG1L2C9J202 215 aa4.12□□□□□ -1.75
CD44-234ENST00000531873 IGF2BP3O00425 579 aaKnown RBP eCLIP4.12□□□□□ -1.75
CD44-234ENST00000531873 NPTXRO95502 500 aa4.12□□□□□ -1.75
CD44-234ENST00000531873 GSNP06396 782 aa4.12□□□□□ -1.75
CD44-234ENST00000531873 CD3EP07766 207 aa4.12□□□□□ -1.75
CD44-234ENST00000531873 POU4F1Q01851 419 aa4.12□□□□□ -1.75
CD44-234ENST00000531873 STRN3Q13033 797 aa4.12□□□□□ -1.75
CD44-234ENST00000531873 DHCR24Q15392 516 aa4.12□□□□□ -1.75
CD44-234ENST00000531873 CPSF6Q16630 551 aaKnown RBP eCLIP4.12□□□□□ -1.75
CD44-234ENST00000531873 SKOR2Q2VWA4 1001 aaPredicted RBP4.12□□□□□ -1.75
CD44-234ENST00000531873 ZCCHC8Q6NZY4 707 aaKnown RBP4.12□□□□□ -1.75
CD44-234ENST00000531873 OGFOD3Q6PK18 319 aa4.12□□□□□ -1.75
CD44-234ENST00000531873 NOL8Q76FK4 1167 aaKnown RBP4.12□□□□□ -1.75
CD44-234ENST00000531873 ZNF765Q7L2R6 523 aa4.12□□□□□ -1.75
CD44-234ENST00000531873 VSIG10LQ86VR7 867 aa4.12□□□□□ -1.75
CD44-234ENST00000531873 DAGLBQ8NCG7 672 aa4.12□□□□□ -1.75
CD44-234ENST00000531873 PIWIL2Q8TC59 973 aaKnown RBP4.12□□□□□ -1.75
CD44-234ENST00000531873 DCAF4Q8WV16 495 aa4.12□□□□□ -1.75
CD44-234ENST00000531873 LEO1Q8WVC0 666 aaPredicted RBP4.12□□□□□ -1.75
CD44-234ENST00000531873 TBC1D32Q96NH3 1257 aa4.12□□□□□ -1.75
CD44-234ENST00000531873 FCRL3Q96P31 734 aaPredicted RBP4.12□□□□□ -1.75
CD44-234ENST00000531873 SLC12A9Q9BXP2 914 aa4.12□□□□□ -1.75
CD44-234ENST00000531873 ASPSCR1Q9BZE9 553 aa4.12□□□□□ -1.75
CD44-234ENST00000531873 DUSP15Q9H1R2 295 aaPredicted RBP4.12□□□□□ -1.75
CD44-234ENST00000531873 GPRC5CQ9NQ84 441 aa4.12□□□□□ -1.75
CD44-234ENST00000531873 PCDHA9Q9Y5H5 950 aa4.12□□□□□ -1.75
CD44-234ENST00000531873 BACE2Q9Y5Z0 518 aa4.12□□□□□ -1.75
CD44-234ENST00000531873 WASHC2CQ9Y4E1 1318 aa4.12□□□□□ -1.75
CD44-234ENST00000531873 C2orf71A6NGG8 1288 aa4.11□□□□□ -1.75
CD44-234ENST00000531873 FAM170BA6NMN3 283 aa4.11□□□□□ -1.75
CD44-234ENST00000531873 WDR64B1ANS9 1081 aa4.11□□□□□ -1.75
CD44-234ENST00000531873 ARVCFO00192 962 aa4.11□□□□□ -1.75
CD44-234ENST00000531873 AQP7O14520 342 aa4.11□□□□□ -1.75
CD44-234ENST00000531873 GPR39O43194 453 aa4.11□□□□□ -1.75
CD44-234ENST00000531873 MSCO60682 206 aa4.11□□□□□ -1.75
CD44-234ENST00000531873 KATNA1O75449 491 aa4.11□□□□□ -1.75
CD44-234ENST00000531873 ZNF205O95201 554 aa4.11□□□□□ -1.75
CD44-234ENST00000531873 FOSL1P15407 271 aa4.11□□□□□ -1.75
CD44-234ENST00000531873 BPIP17213 487 aa4.11□□□□□ -1.75
CD44-234ENST00000531873 BMP8BP34820 402 aa4.11□□□□□ -1.75
CD44-234ENST00000531873 NEK4P51957 841 aa4.11□□□□□ -1.75
CD44-234ENST00000531873 MTMR1Q13613 665 aa4.11□□□□□ -1.75
CD44-234ENST00000531873 STAT4Q14765 748 aa4.11□□□□□ -1.75
CD44-234ENST00000531873 RTP2Q5QGT7 225 aa4.11□□□□□ -1.75
CD44-234ENST00000531873 PIK3R6Q5UE93 754 aa4.11□□□□□ -1.75
CD44-234ENST00000531873 CDCA2Q69YH5 1023 aaPredicted RBP4.11□□□□□ -1.75
CD44-234ENST00000531873 RSPO2Q6UXX9 243 aaPredicted RBP4.11□□□□□ -1.75
CD44-234ENST00000531873 DDX46Q7L014 1031 aaKnown RBP4.11□□□□□ -1.75
CD44-234ENST00000531873 AHI1Q8N157 1196 aa4.11□□□□□ -1.75
CD44-234ENST00000531873 ZNF655Q8N720 491 aaPredicted RBP4.11□□□□□ -1.75
CD44-234ENST00000531873 ATL2Q8NHH9 583 aa4.11□□□□□ -1.75
CD44-234ENST00000531873 ENOX1Q8TC92 643 aaKnown RBP4.11□□□□□ -1.75
CD44-234ENST00000531873 TCTN2Q96GX1 697 aa4.11□□□□□ -1.75
CD44-234ENST00000531873 MAGEB10Q96LZ2 347 aaPredicted RBP4.11□□□□□ -1.75
CD44-234ENST00000531873 ORAI3Q9BRQ5 295 aa4.11□□□□□ -1.75
CD44-234ENST00000531873 PHF20Q9BVI0 1012 aa4.11□□□□□ -1.75
CD44-234ENST00000531873 CRTAC1Q9NQ79 661 aa4.11□□□□□ -1.75
CD44-234ENST00000531873 GTF2IRD1Q9UHL9 959 aa4.11□□□□□ -1.75
CD44-234ENST00000531873 PHLDB1Q86UU1 1377 aa4.11□□□□□ -1.75
CD44-234ENST00000531873 ZNF891A8MT65 544 aaPredicted RBP4.1□□□□□ -1.75
CD44-234ENST00000531873 WASH4PA8MWX3 477 aa4.1□□□□□ -1.75
CD44-234ENST00000531873 MEFVO15553 781 aaPredicted RBP4.1□□□□□ -1.75
CD44-234ENST00000531873 ALDH1L1O75891 902 aa4.1□□□□□ -1.75
CD44-234ENST00000531873 GLRX3O76003 335 aaKnown RBP4.1□□□□□ -1.75
CD44-234ENST00000531873 LCP1P13796 627 aa4.1□□□□□ -1.75
CD44-234ENST00000531873 PLS3P13797 630 aa4.1□□□□□ -1.75
CD44-234ENST00000531873 VAV1P15498 845 aa4.1□□□□□ -1.75
CD44-234ENST00000531873 ID4P47928 161 aa4.1□□□□□ -1.75
CD44-234ENST00000531873 GUCY2FP51841 1108 aa4.1□□□□□ -1.75
CD44-234ENST00000531873 OXCT1P55809 520 aa4.1□□□□□ -1.75
CD44-234ENST00000531873 GPR85P60893 370 aa4.1□□□□□ -1.75
CD44-234ENST00000531873 NKPD1Q17RQ9 610 aa4.1□□□□□ -1.75
CD44-234ENST00000531873 KRTAP19-4Q3LI73 84 aa4.1□□□□□ -1.75
CD44-234ENST00000531873 MBLAC2Q68D91 279 aa4.1□□□□□ -1.75
CD44-234ENST00000531873 CWF19L1Q69YN2 538 aaKnown RBP4.1□□□□□ -1.75
CD44-234ENST00000531873 WWC2Q6AWC2 1192 aa4.1□□□□□ -1.75
CD44-234ENST00000531873 RCSD1Q6JBY9 416 aa4.1□□□□□ -1.75
CD44-234ENST00000531873 NECAB2Q7Z6G3 386 aa4.1□□□□□ -1.75
CD44-234ENST00000531873 MTDHQ86UE4 582 aaKnown RBP4.1□□□□□ -1.75
CD44-234ENST00000531873 FMNL3Q8IVF7 1028 aa4.1□□□□□ -1.75
CD44-234ENST00000531873 SPACA3Q8IXA5 215 aa4.1□□□□□ -1.75
CD44-234ENST00000531873 GIMAP7Q8NHV1 300 aa4.1□□□□□ -1.75
CD44-234ENST00000531873 CEP89Q96ST8 783 aa4.1□□□□□ -1.75
CD44-234ENST00000531873 ZFYVE21Q9BQ24 234 aa4.1□□□□□ -1.75
CD44-234ENST00000531873 TRIM8Q9BZR9 551 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms