RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 FRMPD2Q68DX3 1309 aaPredicted RBP15.64■□□□□ 0.09
AMBRA1-210ENST00000531542 CUL9Q8IWT3 2517 aa15.63■□□□□ 0.09
AMBRA1-210ENST00000531542 ITGA7Q13683 1181 aa15.63■□□□□ 0.09
AMBRA1-210ENST00000531542 CXCL17Q6UXB2 119 aa15.63■□□□□ 0.09
AMBRA1-210ENST00000531542 RNF207Q6ZRF8 634 aa15.63■□□□□ 0.09
AMBRA1-210ENST00000531542 KIAA1211Q6ZU35 1233 aa15.63■□□□□ 0.09
AMBRA1-210ENST00000531542 FBXO16Q8IX29 292 aaPredicted RBP15.63■□□□□ 0.09
AMBRA1-210ENST00000531542 CDX2Q99626 313 aaPredicted RBP15.63■□□□□ 0.09
AMBRA1-210ENST00000531542 GRIN2DO15399 1336 aa15.63■□□□□ 0.09
AMBRA1-210ENST00000531542 MCM3APO60318 1980 aa15.62■□□□□ 0.09
AMBRA1-210ENST00000531542 B4DLN1 442 aa15.62■□□□□ 0.09
AMBRA1-210ENST00000531542 DLL1O00548 723 aa15.62■□□□□ 0.09
AMBRA1-210ENST00000531542 NKRFO15226 690 aaKnown RBP eCLIP15.62■□□□□ 0.09
AMBRA1-210ENST00000531542 MRPL12P52815 198 aaKnown RBP15.62■□□□□ 0.09
AMBRA1-210ENST00000531542 RPS6P62753 249 aaKnown RBP15.62■□□□□ 0.09
AMBRA1-210ENST00000531542 IMMTQ16891 758 aaKnown RBP15.62■□□□□ 0.09
AMBRA1-210ENST00000531542 C16orf59Q7L2K0 433 aa15.62■□□□□ 0.09
AMBRA1-210ENST00000531542 EEPD1Q7L9B9 569 aa15.62■□□□□ 0.09
AMBRA1-210ENST00000531542 PNMA1Q8ND90 353 aa15.62■□□□□ 0.09
AMBRA1-210ENST00000531542 PURBQ96QR8 312 aaKnown RBP15.62■□□□□ 0.09
AMBRA1-210ENST00000531542 ZSCAN10Q96SZ4 725 aaPredicted RBP15.62■□□□□ 0.09
AMBRA1-210ENST00000531542 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.62■□□□□ 0.091e-6■■□□□ 14.5
AMBRA1-210ENST00000531542 TTYH1Q9H313 450 aaPredicted RBP15.62■□□□□ 0.09
AMBRA1-210ENST00000531542 CNNM2Q9H8M5 875 aa15.62■□□□□ 0.09
AMBRA1-210ENST00000531542 PTPDC1A2A3K4 754 aa15.61■□□□□ 0.09
AMBRA1-210ENST00000531542 KDM4AO75164 1064 aa15.61■□□□□ 0.09
AMBRA1-210ENST00000531542 CPT1AP50416 773 aa15.61■□□□□ 0.09
AMBRA1-210ENST00000531542 ASPRV1Q53RT3 343 aa15.61■□□□□ 0.09
AMBRA1-210ENST00000531542 TMEM240Q5SV17 173 aa15.61■□□□□ 0.09
AMBRA1-210ENST00000531542 PSRC1Q6PGN9 363 aaPredicted RBP15.61■□□□□ 0.09
AMBRA1-210ENST00000531542 SLC30A10Q6XR72 485 aa15.61■□□□□ 0.09
AMBRA1-210ENST00000531542 WDR11Q9BZH6 1224 aa15.61■□□□□ 0.09
AMBRA1-210ENST00000531542 KRT23Q9C075 422 aa15.61■□□□□ 0.09
AMBRA1-210ENST00000531542 POLR3EQ9NVU0 708 aa15.61■□□□□ 0.09
AMBRA1-210ENST00000531542 ZSWIM5Q9P217 1185 aa15.61■□□□□ 0.09
AMBRA1-210ENST00000531542 DDX49Q9Y6V7 483 aaKnown RBP15.61■□□□□ 0.09
AMBRA1-210ENST00000531542 KPNA6O60684 536 aa15.6■□□□□ 0.09
AMBRA1-210ENST00000531542 CSF2RAP15509 400 aa15.6■□□□□ 0.09
AMBRA1-210ENST00000531542 TMEM63BQ5T3F8 832 aa15.6■□□□□ 0.09
AMBRA1-210ENST00000531542 ENAHQ8N8S7 591 aaPredicted RBP15.6■□□□□ 0.09
AMBRA1-210ENST00000531542 SCFD2Q8WU76 684 aa15.6■□□□□ 0.09
AMBRA1-210ENST00000531542 YTHDC1Q96MU7 727 aaKnown RBP15.6■□□□□ 0.09
AMBRA1-210ENST00000531542 FAM161BQ96MY7 647 aa15.6■□□□□ 0.09
AMBRA1-210ENST00000531542 KAT14Q9H8E8 782 aa15.6■□□□□ 0.09
AMBRA1-210ENST00000531542 LRRC37A2A6NM11 1700 aa15.6■□□□□ 0.09
AMBRA1-210ENST00000531542 A6NJR5 290 aa15.59■□□□□ 0.09
AMBRA1-210ENST00000531542 SUPT20HL2P0C7V6 817 aa15.59■□□□□ 0.09
AMBRA1-210ENST00000531542 CALML3P27482 149 aa15.59■□□□□ 0.09
AMBRA1-210ENST00000531542 PURAQ00577 322 aaKnown RBP15.59■□□□□ 0.09
AMBRA1-210ENST00000531542 PDE4DQ08499 809 aa15.59■□□□□ 0.09
AMBRA1-210ENST00000531542 BRDTQ58F21 947 aaPredicted RBP15.59■□□□□ 0.09
AMBRA1-210ENST00000531542 HERVK_113Q902F9 699 aa15.59■□□□□ 0.09
AMBRA1-210ENST00000531542 ZKSCAN3Q9BRR0 538 aa15.59■□□□□ 0.09
AMBRA1-210ENST00000531542 NOC4LQ9BVI4 516 aaKnown RBP15.59■□□□□ 0.09
AMBRA1-210ENST00000531542 HIPK3Q9H422 1215 aa15.59■□□□□ 0.09
AMBRA1-210ENST00000531542 IL23AQ9NPF7 189 aa15.59■□□□□ 0.09
AMBRA1-210ENST00000531542 ABCB11O95342 1321 aa15.59■□□□□ 0.09
AMBRA1-210ENST00000531542 B4E1Z4 1266 aa15.58■□□□□ 0.08
AMBRA1-210ENST00000531542 B4GALT4O60513 344 aa15.58■□□□□ 0.08
AMBRA1-210ENST00000531542 GOLGA8HP0CJ92 632 aa15.58■□□□□ 0.08
AMBRA1-210ENST00000531542 DNAJB2P25686 324 aa15.58■□□□□ 0.08
AMBRA1-210ENST00000531542 GHRHRQ02643 423 aa15.58■□□□□ 0.08
AMBRA1-210ENST00000531542 CDC37Q16543 378 aaPredicted RBP15.58■□□□□ 0.08
AMBRA1-210ENST00000531542 ZNF365Q70YC5 407 aa15.58■□□□□ 0.08
AMBRA1-210ENST00000531542 MCF2L2Q86YR7 1114 aa15.58■□□□□ 0.08
AMBRA1-210ENST00000531542 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.58■□□□□ 0.08
AMBRA1-210ENST00000531542 ADGRF4Q8IZF3 695 aa15.58■□□□□ 0.08
AMBRA1-210ENST00000531542 IWS1Q96ST2 819 aa15.58■□□□□ 0.08
AMBRA1-210ENST00000531542 UBA5Q9GZZ9 404 aa15.58■□□□□ 0.08
AMBRA1-210ENST00000531542 ALDH8A1Q9H2A2 487 aaPredicted RBP15.58■□□□□ 0.08
AMBRA1-210ENST00000531542 TNKSO95271 1327 aa15.58■□□□□ 0.08
AMBRA1-210ENST00000531542 RAD50Q92878 1312 aa15.58■□□□□ 0.08
AMBRA1-210ENST00000531542 LCTP09848 1927 aa15.57■□□□□ 0.08
AMBRA1-210ENST00000531542 PARP1P09874 1014 aaKnown RBP15.57■□□□□ 0.08
AMBRA1-210ENST00000531542 PTGS1P23219 599 aa15.57■□□□□ 0.08
AMBRA1-210ENST00000531542 CYP2C18P33260 490 aa15.57■□□□□ 0.08
AMBRA1-210ENST00000531542 PTPN11Q06124 597 aaPredicted RBP15.57■□□□□ 0.08
AMBRA1-210ENST00000531542 PPP2R5BQ15173 497 aa15.57■□□□□ 0.08
AMBRA1-210ENST00000531542 NFRKBQ6P4R8 1299 aa15.57■□□□□ 0.08
AMBRA1-210ENST00000531542 SAMD3Q8N6K7 520 aa15.57■□□□□ 0.08
AMBRA1-210ENST00000531542 NSUN6Q8TEA1 469 aaKnown RBP15.57■□□□□ 0.08
AMBRA1-210ENST00000531542 UBAC1Q9BSL1 405 aa15.57■□□□□ 0.08
AMBRA1-210ENST00000531542 MTG1Q9BT17 334 aaPredicted RBP15.57■□□□□ 0.08
AMBRA1-210ENST00000531542 PPP1R12CQ9BZL4 782 aa15.57■□□□□ 0.08
AMBRA1-210ENST00000531542 TRPV6Q9H1D0 765 aa15.57■□□□□ 0.08
AMBRA1-210ENST00000531542 MTIF3Q9H2K0 278 aaKnown RBP15.57■□□□□ 0.08
AMBRA1-210ENST00000531542 MAP3K20Q9NYL2 800 aaKnown RBP15.57■□□□□ 0.08
AMBRA1-210ENST00000531542 FGBP02675 491 aa15.56■□□□□ 0.08
AMBRA1-210ENST00000531542 PFKMP08237 780 aa15.56■□□□□ 0.08
AMBRA1-210ENST00000531542 PSMC6P62333 389 aa15.56■□□□□ 0.08
AMBRA1-210ENST00000531542 TTLL4Q14679 1199 aa15.56■□□□□ 0.08
AMBRA1-210ENST00000531542 SEC23AQ15436 765 aa15.56■□□□□ 0.08
AMBRA1-210ENST00000531542 TTC22Q5TAA0 569 aa15.56■□□□□ 0.08
AMBRA1-210ENST00000531542 CCDC62Q6P9F0 684 aa15.56■□□□□ 0.08
AMBRA1-210ENST00000531542 RPUSD2Q8IZ73 545 aaKnown RBP15.56■□□□□ 0.08
AMBRA1-210ENST00000531542 OR6J1Q8NGC5 347 aa15.56■□□□□ 0.08
AMBRA1-210ENST00000531542 MAFAQ8NHW3 353 aaPredicted RBP15.56■□□□□ 0.08
AMBRA1-210ENST00000531542 SYTL5Q8TDW5 730 aaPredicted RBP15.56■□□□□ 0.08
AMBRA1-210ENST00000531542 TIFAQ96CG3 184 aa15.56■□□□□ 0.08
AMBRA1-210ENST00000531542 MTMR8Q96EF0 704 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 149.5 ms