RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 UNC5AQ6ZN44 842 aa8.16□□□□□ -1.1
PTPRK-220ENST00000531466 NLGN2Q8NFZ4 835 aa8.16□□□□□ -1.1
PTPRK-220ENST00000531466 GIPC2Q8TF65 315 aa8.16□□□□□ -1.1
PTPRK-220ENST00000531466 NOX5Q96PH1 765 aa8.16□□□□□ -1.1
PTPRK-220ENST00000531466 TM9SF2Q99805 663 aa8.16□□□□□ -1.1
PTPRK-220ENST00000531466 FBLN5Q9UBX5 448 aa8.16□□□□□ -1.1
PTPRK-220ENST00000531466 RWDD3Q9Y3V2 267 aa8.16□□□□□ -1.1
PTPRK-220ENST00000531466 MAGEA10P43363 369 aaPredicted RBP8.15□□□□□ -1.1
PTPRK-220ENST00000531466 CABP7Q86V35 215 aa8.15□□□□□ -1.1
PTPRK-220ENST00000531466 SMARCC2Q8TAQ2 1214 aa8.15□□□□□ -1.1
PTPRK-220ENST00000531466 LNPKQ9C0E8 428 aa8.15□□□□□ -1.1
PTPRK-220ENST00000531466 PDIA4P13667 645 aaKnown RBP8.14□□□□□ -1.11
PTPRK-220ENST00000531466 ADCY4Q8NFM4 1077 aa8.14□□□□□ -1.11
PTPRK-220ENST00000531466 TSPAN17Q96FV3 270 aa8.14□□□□□ -1.11
PTPRK-220ENST00000531466 PPT2Q9UMR5 302 aa8.14□□□□□ -1.11
PTPRK-220ENST00000531466 GUCY2CP25092 1073 aa8.13□□□□□ -1.11
PTPRK-220ENST00000531466 ZNF326Q5BKZ1 582 aaKnown RBP8.13□□□□□ -1.11
PTPRK-220ENST00000531466 LZTR1Q8N653 840 aa8.13□□□□□ -1.11
PTPRK-220ENST00000531466 MCMBPQ9BTE3 642 aa8.13□□□□□ -1.11
PTPRK-220ENST00000531466 ZNF214Q9UL59 606 aaPredicted RBP8.13□□□□□ -1.11
PTPRK-220ENST00000531466 STXBP3O00186 592 aa8.12□□□□□ -1.11
PTPRK-220ENST00000531466 CBFA2T2O43439 604 aa8.12□□□□□ -1.11
PTPRK-220ENST00000531466 ITGB3P05106 788 aa8.12□□□□□ -1.11
PTPRK-220ENST00000531466 SARSP49591 514 aaKnown RBP8.12□□□□□ -1.11
PTPRK-220ENST00000531466 ADAM17P78536 824 aa8.12□□□□□ -1.11
PTPRK-220ENST00000531466 TCEAL1Q15170 157 aa8.12□□□□□ -1.11
PTPRK-220ENST00000531466 RCSD1Q6JBY9 416 aa8.12□□□□□ -1.11
PTPRK-220ENST00000531466 SPATA6Q9NWH7 488 aaPredicted RBP8.12□□□□□ -1.11
PTPRK-220ENST00000531466 SMPD4Q9NXE4 827 aa8.12□□□□□ -1.11
PTPRK-220ENST00000531466 NTMQ9P121 344 aa8.12□□□□□ -1.11
PTPRK-220ENST00000531466 EEF1DP3Q658K8 133 aa8.11□□□□□ -1.11
PTPRK-220ENST00000531466 ZNF761Q86XN6 746 aaPredicted RBP8.11□□□□□ -1.11
PTPRK-220ENST00000531466 TMEM87AQ8NBN3 555 aa8.11□□□□□ -1.11
PTPRK-220ENST00000531466 ZBTB8AQ96BR9 441 aa8.11□□□□□ -1.11
PTPRK-220ENST00000531466 DIS3Q9Y2L1 958 aaKnown RBP8.11□□□□□ -1.11
PTPRK-220ENST00000531466 A0A087WZG4 1122 aa8.1□□□□□ -1.11
PTPRK-220ENST00000531466 AURKAO14965 403 aa8.1□□□□□ -1.11
PTPRK-220ENST00000531466 PPP1R11O60927 126 aaPredicted RBP8.1□□□□□ -1.11
PTPRK-220ENST00000531466 CACNB2Q08289 660 aaPredicted RBP8.1□□□□□ -1.11
PTPRK-220ENST00000531466 SMAD4Q13485 552 aaKnown RBP8.1□□□□□ -1.11
PTPRK-220ENST00000531466 DPY19L1Q2PZI1 675 aa8.1□□□□□ -1.11
PTPRK-220ENST00000531466 KRTAP5-3Q6L8H2 238 aa8.1□□□□□ -1.11
PTPRK-220ENST00000531466 CPA5Q8WXQ8 436 aa8.1□□□□□ -1.11
PTPRK-220ENST00000531466 RNF34Q969K3 372 aa8.1□□□□□ -1.11
PTPRK-220ENST00000531466 PEX11GQ96HA9 241 aa8.1□□□□□ -1.11
PTPRK-220ENST00000531466 GULP1Q9UBP9 304 aa8.1□□□□□ -1.11
PTPRK-220ENST00000531466 NUDT5Q9UKK9 219 aa8.1□□□□□ -1.11
PTPRK-220ENST00000531466 LTBP3Q9NS15 1303 aa8.09□□□□□ -1.11
PTPRK-220ENST00000531466 VAMP4O75379 141 aa8.09□□□□□ -1.11
PTPRK-220ENST00000531466 TNFRSF1AP19438 455 aa8.09□□□□□ -1.11
PTPRK-220ENST00000531466 TRIM26Q12899 539 aaPredicted RBP8.09□□□□□ -1.11
PTPRK-220ENST00000531466 CPNE8Q86YQ8 564 aa8.09□□□□□ -1.11
PTPRK-220ENST00000531466 NETO2Q8NC67 525 aa8.09□□□□□ -1.11
PTPRK-220ENST00000531466 DDX11Q96FC9 970 aa8.09□□□□□ -1.11
PTPRK-220ENST00000531466 RBM15Q96T37 977 aaKnown RBP eCLIP8.09□□□□□ -1.11
PTPRK-220ENST00000531466 HAUS7Q99871 368 aa8.09□□□□□ -1.11
PTPRK-220ENST00000531466 MTA3Q9BTC8 594 aa8.09□□□□□ -1.11
PTPRK-220ENST00000531466 GZF1Q9H116 711 aaPredicted RBP8.09□□□□□ -1.11
PTPRK-220ENST00000531466 WHRNQ9P202 907 aa8.09□□□□□ -1.11
PTPRK-220ENST00000531466 SLC9A5Q14940 896 aa8.08□□□□□ -1.12
PTPRK-220ENST00000531466 ZNF394Q53GI3 561 aa8.08□□□□□ -1.12
PTPRK-220ENST00000531466 LDLRAD1Q5T700 205 aa8.08□□□□□ -1.12
PTPRK-220ENST00000531466 TTLL7Q6ZT98 887 aa8.08□□□□□ -1.12
PTPRK-220ENST00000531466 RBBP8NLQ8NC74 664 aaPredicted RBP8.08□□□□□ -1.12
PTPRK-220ENST00000531466 USP33Q8TEY7 942 aa8.08□□□□□ -1.12
PTPRK-220ENST00000531466 BCL11AQ9H165 835 aa8.08□□□□□ -1.12
PTPRK-220ENST00000531466 SIT1Q9Y3P8 196 aa8.08□□□□□ -1.12
PTPRK-220ENST00000531466 PCDHGB7Q9Y5F8 929 aa8.08□□□□□ -1.12
PTPRK-220ENST00000531466 AKAP8O43823 692 aaKnown RBP8.07□□□□□ -1.12
PTPRK-220ENST00000531466 ZNF76P36508 570 aa8.07□□□□□ -1.12
PTPRK-220ENST00000531466 SEPHS1P49903 392 aa8.07□□□□□ -1.12
PTPRK-220ENST00000531466 ZXDAP98168 799 aa8.07□□□□□ -1.12
PTPRK-220ENST00000531466 CCDC81Q6ZN84 652 aa8.07□□□□□ -1.12
PTPRK-220ENST00000531466 ADAMTS17Q8TE56 1095 aa8.07□□□□□ -1.12
PTPRK-220ENST00000531466 LOXL4Q96JB6 756 aa8.07□□□□□ -1.12
PTPRK-220ENST00000531466 MATN3O15232 486 aa8.06□□□□□ -1.12
PTPRK-220ENST00000531466 C8BP07358 591 aa8.06□□□□□ -1.12
PTPRK-220ENST00000531466 GNPTABQ3T906 1256 aa8.06□□□□□ -1.12
PTPRK-220ENST00000531466 WWC2Q6AWC2 1192 aa8.06□□□□□ -1.12
PTPRK-220ENST00000531466 ADAT2Q7Z6V5 191 aaKnown RBP8.06□□□□□ -1.12
PTPRK-220ENST00000531466 FGD4Q96M96 766 aa8.06□□□□□ -1.12
PTPRK-220ENST00000531466 SYT3Q9BQG1 590 aa8.06□□□□□ -1.12
PTPRK-220ENST00000531466 KLHL25Q9H0H3 589 aa8.06□□□□□ -1.12
PTPRK-220ENST00000531466 GBP3Q9H0R5 595 aa8.06□□□□□ -1.12
PTPRK-220ENST00000531466 PCDHB10Q9UN67 800 aa8.06□□□□□ -1.12
PTPRK-220ENST00000531466 BACE2Q9Y5Z0 518 aa8.06□□□□□ -1.12
PTPRK-220ENST00000531466 C2orf71A6NGG8 1288 aa8.05□□□□□ -1.12
PTPRK-220ENST00000531466 SMARCA5O60264 1052 aaPredicted RBP8.05□□□□□ -1.12
PTPRK-220ENST00000531466 ZBTB7AO95365 584 aa8.05□□□□□ -1.12
PTPRK-220ENST00000531466 CYP2C8P10632 490 aa8.05□□□□□ -1.12
PTPRK-220ENST00000531466 HEATR6Q6AI08 1181 aaKnown RBP8.05□□□□□ -1.12
PTPRK-220ENST00000531466 C8orf49Q96NF6 230 aa8.05□□□□□ -1.12
PTPRK-220ENST00000531466 GORASP1Q9BQQ3 440 aa8.05□□□□□ -1.12
PTPRK-220ENST00000531466 KRTAP3-1Q9BYR8 98 aa8.05□□□□□ -1.12
PTPRK-220ENST00000531466 NTRK1P04629 796 aa8.04□□□□□ -1.12
PTPRK-220ENST00000531466 LINC00482Q8N8I6 264 aa8.04□□□□□ -1.12
PTPRK-220ENST00000531466 CGGBP1Q9UFW8 167 aaPredicted RBP8.04□□□□□ -1.12
PTPRK-220ENST00000531466 NPHP3-ACAD11A0A0J9YXS1 232 aa8.03□□□□□ -1.12
PTPRK-220ENST00000531466 PLATP00750 562 aa8.03□□□□□ -1.12
PTPRK-220ENST00000531466 FUCA1P04066 466 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms