RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 RPUSD2Q8IZ73 545 aaKnown RBP24.96■■□□□ 1.59
CHKA-206ENST00000531341 PI4K2BQ8TCG2 481 aa24.96■■□□□ 1.59
CHKA-206ENST00000531341 VTA1Q9NP79 307 aa24.96■■□□□ 1.59
CHKA-206ENST00000531341 CCPG1Q9ULG6 757 aa24.96■■□□□ 1.59
CHKA-206ENST00000531341 PCDHA11Q9Y5I1 949 aa24.96■■□□□ 1.59
CHKA-206ENST00000531341 LCTP09848 1927 aa24.96■■□□□ 1.59
CHKA-206ENST00000531341 BMP1P13497 986 aa24.95■■□□□ 1.58
CHKA-206ENST00000531341 SLC16A2P36021 539 aa24.95■■□□□ 1.58
CHKA-206ENST00000531341 BAATQ14032 418 aaPredicted RBP24.95■■□□□ 1.58
CHKA-206ENST00000531341 ZMYM1Q5SVZ6 1142 aa24.95■■□□□ 1.58
CHKA-206ENST00000531341 DEFB128Q7Z7B8 93 aa24.95■■□□□ 1.58
CHKA-206ENST00000531341 SEZ6LQ9BYH1 1024 aa24.95■■□□□ 1.58
CHKA-206ENST00000531341 TSPY2A6NKD2 308 aa24.94■■□□□ 1.58
CHKA-206ENST00000531341 SLC3A2P08195 630 aaKnown RBP24.94■■□□□ 1.58
CHKA-206ENST00000531341 ATP2A2P16615 1042 aaKnown RBP24.94■■□□□ 1.58
CHKA-206ENST00000531341 DUSP28Q4G0W2 176 aa24.94■■□□□ 1.58
CHKA-206ENST00000531341 CERS4Q9HA82 394 aa24.94■■□□□ 1.58
CHKA-206ENST00000531341 NFIBO00712 420 aa24.93■■□□□ 1.58
CHKA-206ENST00000531341 ICAM1P05362 532 aa24.93■■□□□ 1.58
CHKA-206ENST00000531341 NOVP48745 357 aa24.93■■□□□ 1.58
CHKA-206ENST00000531341 ALDH5A1P51649 535 aaPredicted RBP24.93■■□□□ 1.58
CHKA-206ENST00000531341 PURAQ00577 322 aaKnown RBP24.93■■□□□ 1.58
CHKA-206ENST00000531341 WDR11Q9BZH6 1224 aa24.93■■□□□ 1.58
CHKA-206ENST00000531341 RANBP17Q9H2T7 1088 aaKnown RBP24.93■■□□□ 1.58
CHKA-206ENST00000531341 TNKSO95271 1327 aa24.92■■□□□ 1.58
CHKA-206ENST00000531341 EPOPA6NHQ4 379 aa24.92■■□□□ 1.58
CHKA-206ENST00000531341 ARHGEF15O94989 841 aa24.92■■□□□ 1.58
CHKA-206ENST00000531341 CA3P07451 260 aa24.92■■□□□ 1.58
CHKA-206ENST00000531341 MYL3P08590 195 aa24.92■■□□□ 1.58
CHKA-206ENST00000531341 KCNQ1P51787 676 aa24.92■■□□□ 1.58
CHKA-206ENST00000531341 FSD1Q9BTV5 496 aa24.92■■□□□ 1.58
CHKA-206ENST00000531341 VPS53Q5VIR6 699 aa24.91■■□□□ 1.58
CHKA-206ENST00000531341 KRT40Q6A162 431 aa24.91■■□□□ 1.58
CHKA-206ENST00000531341 MTCH2Q9Y6C9 303 aa24.91■■□□□ 1.58
CHKA-206ENST00000531341 RBM47A0AV96 593 aaKnown RBP24.9■■□□□ 1.58
CHKA-206ENST00000531341 RBAK-RBAKDNI3L0D1 243 aa24.9■■□□□ 1.58
CHKA-206ENST00000531341 RANBP6O60518 1105 aaKnown RBP24.9■■□□□ 1.58
CHKA-206ENST00000531341 CCDC96Q2M329 555 aa24.9■■□□□ 1.58
CHKA-206ENST00000531341 LRRFIP1Q32MZ4 808 aaKnown RBP24.9■■□□□ 1.58
CHKA-206ENST00000531341 SLC30A10Q6XR72 485 aa24.9■■□□□ 1.58
CHKA-206ENST00000531341 IL27Q8NEV9 243 aa24.9■■□□□ 1.58
CHKA-206ENST00000531341 POLR3EQ9NVU0 708 aa24.9■■□□□ 1.58
CHKA-206ENST00000531341 FRMPD2Q68DX3 1309 aaPredicted RBP24.89■■□□□ 1.58
CHKA-206ENST00000531341 TTC41PQ6P2S7 1318 aa24.89■■□□□ 1.58
CHKA-206ENST00000531341 TCF20Q9UGU0 1960 aaKnown RBP24.89■■□□□ 1.58
CHKA-206ENST00000531341 NBPF20Q3BBV1 942 aa24.89■■□□□ 1.58
CHKA-206ENST00000531341 TMEM67Q5HYA8 995 aa24.89■■□□□ 1.58
CHKA-206ENST00000531341 OR6J1Q8NGC5 347 aa24.89■■□□□ 1.58
CHKA-206ENST00000531341 CLEC4DQ8WXI8 215 aa24.89■■□□□ 1.58
CHKA-206ENST00000531341 COPS5Q92905 334 aa24.89■■□□□ 1.58
CHKA-206ENST00000531341 TSPYL2Q9H2G4 693 aaPredicted RBP24.89■■□□□ 1.58
CHKA-206ENST00000531341 SCN5AQ14524 2016 aa24.88■■□□□ 1.57
CHKA-206ENST00000531341 SUPT20HL2P0C7V6 817 aa24.88■■□□□ 1.57
CHKA-206ENST00000531341 BTNL9Q6UXG8 535 aa24.88■■□□□ 1.57
CHKA-206ENST00000531341 DCAF4Q8WV16 495 aa24.88■■□□□ 1.57
CHKA-206ENST00000531341 MTG1Q9BT17 334 aaPredicted RBP24.88■■□□□ 1.57
CHKA-206ENST00000531341 ADD3Q9UEY8 706 aaKnown RBP24.88■■□□□ 1.57
CHKA-206ENST00000531341 PTPDC1A2A3K4 754 aa24.87■■□□□ 1.57
CHKA-206ENST00000531341 PFKMP08237 780 aa24.87■■□□□ 1.57
CHKA-206ENST00000531341 POU3F3P20264 500 aaPredicted RBP24.87■■□□□ 1.57
CHKA-206ENST00000531341 CALML3P27482 149 aa24.87■■□□□ 1.57
CHKA-206ENST00000531341 CPT1AP50416 773 aa24.87■■□□□ 1.57
CHKA-206ENST00000531341 SKIV2LQ15477 1246 aaKnown RBP24.87■■□□□ 1.57
CHKA-206ENST00000531341 FAM47CQ5HY64 1035 aa24.87■■□□□ 1.57
CHKA-206ENST00000531341 PPP4R3BQ5MIZ7 849 aa24.87■■□□□ 1.57
CHKA-206ENST00000531341 SYDE2Q5VT97 1194 aa24.87■■□□□ 1.57
CHKA-206ENST00000531341 SPRED2Q7Z698 418 aa24.87■■□□□ 1.57
CHKA-206ENST00000531341 GPCPD1Q9NPB8 672 aa24.87■■□□□ 1.57
CHKA-206ENST00000531341 ANAPC4Q9UJX5 808 aa24.87■■□□□ 1.57
CHKA-206ENST00000531341 ERC2O15083 957 aa24.86■■□□□ 1.57
CHKA-206ENST00000531341 IQCF3P0C7M6 154 aa24.86■■□□□ 1.57
CHKA-206ENST00000531341 DIEXFQ68CQ4 756 aaKnown RBP24.86■■□□□ 1.57
CHKA-206ENST00000531341 TMEM47Q9BQJ4 181 aa24.86■■□□□ 1.57
CHKA-206ENST00000531341 TAP1Q03518 808 aa24.85■■□□□ 1.57
CHKA-206ENST00000531341 GPHNQ9NQX3 736 aaPredicted RBP24.85■■□□□ 1.57
CHKA-206ENST00000531341 PCDHB15Q9Y5E8 787 aa24.85■■□□□ 1.57
CHKA-206ENST00000531341 ORC4O43929 436 aa24.84■■□□□ 1.57
CHKA-206ENST00000531341 FGRP09769 529 aa24.84■■□□□ 1.57
CHKA-206ENST00000531341 ARNTL2Q8WYA1 636 aa24.84■■□□□ 1.57
CHKA-206ENST00000531341 NCOR1O75376 2440 aa24.84■■□□□ 1.57
CHKA-206ENST00000531341 A6NJR5 290 aa24.83■■□□□ 1.57
CHKA-206ENST00000531341 ARIH2O95376 493 aa24.83■■□□□ 1.57
CHKA-206ENST00000531341 EDNRBP24530 442 aa24.83■■□□□ 1.57
CHKA-206ENST00000531341 RNF207Q6ZRF8 634 aa24.83■■□□□ 1.57
CHKA-206ENST00000531341 FTOQ9C0B1 505 aaKnown RBP eCLIP24.83■■□□□ 1.57
CHKA-206ENST00000531341 PRRC2BQ5JSZ5 2229 aaKnown RBP24.83■■□□□ 1.57
CHKA-206ENST00000531341 LOC102724159A0A0B4J2E5 919 aa24.82■■□□□ 1.56
CHKA-206ENST00000531341 ACTN1P12814 892 aa24.82■■□□□ 1.56
CHKA-206ENST00000531341 PLA2G5P39877 138 aa24.82■■□□□ 1.56
CHKA-206ENST00000531341 RPS6P62753 249 aaKnown RBP24.82■■□□□ 1.56
CHKA-206ENST00000531341 GPNMBQ14956 572 aa24.82■■□□□ 1.56
CHKA-206ENST00000531341 PPP2R5BQ15173 497 aa24.82■■□□□ 1.56
CHKA-206ENST00000531341 PWP2Q15269 919 aaKnown RBP24.82■■□□□ 1.56
CHKA-206ENST00000531341 RRP12Q5JTH9 1297 aaKnown RBP24.82■■□□□ 1.56
CHKA-206ENST00000531341 NFRKBQ6P4R8 1299 aa24.82■■□□□ 1.56
CHKA-206ENST00000531341 HERC6Q8IVU3 1022 aa24.82■■□□□ 1.56
CHKA-206ENST00000531341 PHOSPHO2Q8TCD6 241 aa24.82■■□□□ 1.56
CHKA-206ENST00000531341 SLC9A7Q96T83 725 aa24.82■■□□□ 1.56
CHKA-206ENST00000531341 EPHX3Q9H6B9 360 aa24.82■■□□□ 1.56
CHKA-206ENST00000531341 SALL3Q9BXA9 1300 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms