RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 PRR12Q9ULL5 1215 aa10.94□□□□□ -0.66
CHMP4A-205ENST00000531158 ATG2AQ2TAZ0 1938 aa10.94□□□□□ -0.66
CHMP4A-205ENST00000531158 PATL2C9JE40 543 aaKnown RBP10.93□□□□□ -0.66
CHMP4A-205ENST00000531158 TLR3O15455 904 aaKnown RBP10.93□□□□□ -0.66
CHMP4A-205ENST00000531158 ARHGEF15O94989 841 aa10.93□□□□□ -0.66
CHMP4A-205ENST00000531158 FGBP02675 491 aa10.93□□□□□ -0.66
CHMP4A-205ENST00000531158 TSPY3P0CV98 308 aa10.93□□□□□ -0.66
CHMP4A-205ENST00000531158 TSPY8P0CW00 308 aa10.93□□□□□ -0.66
CHMP4A-205ENST00000531158 ALAS1P13196 640 aa10.93□□□□□ -0.66
CHMP4A-205ENST00000531158 NOVP48745 357 aa10.93□□□□□ -0.66
CHMP4A-205ENST00000531158 PPARAQ07869 468 aa10.93□□□□□ -0.66
CHMP4A-205ENST00000531158 RAB30Q15771 203 aa10.93□□□□□ -0.66
CHMP4A-205ENST00000531158 CCDC174Q6PII3 467 aa10.93□□□□□ -0.66
CHMP4A-205ENST00000531158 MORC4Q8TE76 937 aa10.93□□□□□ -0.66
CHMP4A-205ENST00000531158 PPP1R13LQ8WUF5 828 aa10.93□□□□□ -0.66
CHMP4A-205ENST00000531158 STAG1Q8WVM7 1258 aa10.93□□□□□ -0.66
CHMP4A-205ENST00000531158 TRMT13Q9NUP7 481 aaKnown RBP10.93□□□□□ -0.66
CHMP4A-205ENST00000531158 RBM19Q9Y4C8 960 aaKnown RBP10.93□□□□□ -0.66
CHMP4A-205ENST00000531158 EPOPA6NHQ4 379 aa10.92□□□□□ -0.66
CHMP4A-205ENST00000531158 PRR33A8MZF0 331 aa10.92□□□□□ -0.66
CHMP4A-205ENST00000531158 PI4K2BG5E9Z4 385 aa10.92□□□□□ -0.66
CHMP4A-205ENST00000531158 DYNC1LI2O43237 492 aaPredicted RBP10.92□□□□□ -0.66
CHMP4A-205ENST00000531158 PLA2G6O60733 806 aa10.92□□□□□ -0.66
CHMP4A-205ENST00000531158 CABYRO75952 493 aa10.92□□□□□ -0.66
CHMP4A-205ENST00000531158 APPP05067 770 aa10.92□□□□□ -0.66
CHMP4A-205ENST00000531158 GNAT2P19087 354 aa10.92□□□□□ -0.66
CHMP4A-205ENST00000531158 SLC1A4P43007 532 aa10.92□□□□□ -0.66
CHMP4A-205ENST00000531158 CTDSPL2Q05D32 466 aa10.92□□□□□ -0.66
CHMP4A-205ENST00000531158 TTLL4Q14679 1199 aa10.92□□□□□ -0.66
CHMP4A-205ENST00000531158 NOL8Q76FK4 1167 aaKnown RBP10.92□□□□□ -0.66
CHMP4A-205ENST00000531158 SPRED2Q7Z698 418 aa10.92□□□□□ -0.66
CHMP4A-205ENST00000531158 ALDH8A1Q9H2A2 487 aaPredicted RBP10.92□□□□□ -0.66
CHMP4A-205ENST00000531158 SLC28A3Q9HAS3 691 aa10.92□□□□□ -0.66
CHMP4A-205ENST00000531158 CTDP1Q9Y5B0 961 aaPredicted RBP10.92□□□□□ -0.66
CHMP4A-205ENST00000531158 ASB14A6NK59 587 aa10.91□□□□□ -0.66
CHMP4A-205ENST00000531158 RFXAPO00287 272 aa10.91□□□□□ -0.66
CHMP4A-205ENST00000531158 NFIBO00712 420 aa10.91□□□□□ -0.66
CHMP4A-205ENST00000531158 ERC2O15083 957 aa10.91□□□□□ -0.66
CHMP4A-205ENST00000531158 ZFYP08048 801 aaPredicted RBP10.91□□□□□ -0.66
CHMP4A-205ENST00000531158 FDX1P10109 184 aa10.91□□□□□ -0.66
CHMP4A-205ENST00000531158 CYP2C9P11712 490 aa10.91□□□□□ -0.66
CHMP4A-205ENST00000531158 PURAQ00577 322 aaKnown RBP10.91□□□□□ -0.66
CHMP4A-205ENST00000531158 TKFCQ3LXA3 575 aa10.91□□□□□ -0.66
CHMP4A-205ENST00000531158 ZMYM1Q5SVZ6 1142 aa10.91□□□□□ -0.66
CHMP4A-205ENST00000531158 VPS53Q5VIR6 699 aa10.91□□□□□ -0.66
CHMP4A-205ENST00000531158 KRT40Q6A162 431 aa10.91□□□□□ -0.66
CHMP4A-205ENST00000531158 TTBK2Q6IQ55 1244 aa10.91□□□□□ -0.66
CHMP4A-205ENST00000531158 RCSD1Q6JBY9 416 aa10.91□□□□□ -0.66
CHMP4A-205ENST00000531158 FAM160B2Q86V87 743 aa10.91□□□□□ -0.66
CHMP4A-205ENST00000531158 MSRAQ9UJ68 235 aa10.91□□□□□ -0.66
CHMP4A-205ENST00000531158 RCAN3Q9UKA8 241 aa10.91□□□□□ -0.66
CHMP4A-205ENST00000531158 STX8Q9UNK0 236 aa10.91□□□□□ -0.66
CHMP4A-205ENST00000531158 Q9Y3F1 56 aa10.91□□□□□ -0.66
CHMP4A-205ENST00000531158 MICAL3Q7RTP6 2002 aa10.91□□□□□ -0.66
CHMP4A-205ENST00000531158 SALL3Q9BXA9 1300 aa10.9□□□□□ -0.66
CHMP4A-205ENST00000531158 NLRC5Q86WI3 1866 aa10.9□□□□□ -0.66
CHMP4A-205ENST00000531158 DOCK5Q9H7D0 1870 aa10.9□□□□□ -0.66
CHMP4A-205ENST00000531158 TLL1O43897 1013 aa10.9□□□□□ -0.66
CHMP4A-205ENST00000531158 CA3P07451 260 aa10.9□□□□□ -0.66
CHMP4A-205ENST00000531158 SLC16A2P36021 539 aa10.9□□□□□ -0.66
CHMP4A-205ENST00000531158 ALDH5A1P51649 535 aaPredicted RBP10.9□□□□□ -0.66
CHMP4A-205ENST00000531158 RRP1P56182 461 aaKnown RBP10.9□□□□□ -0.66
CHMP4A-205ENST00000531158 FOXK2Q01167 660 aa10.9□□□□□ -0.66
CHMP4A-205ENST00000531158 PDE4BQ07343 736 aa10.9□□□□□ -0.66
CHMP4A-205ENST00000531158 DUSP28Q4G0W2 176 aa10.9□□□□□ -0.66
CHMP4A-205ENST00000531158 PPP2R2DQ66LE6 453 aa10.9□□□□□ -0.66
CHMP4A-205ENST00000531158 IQSEC1Q6DN90 963 aa10.9□□□□□ -0.66
CHMP4A-205ENST00000531158 NSMFQ6X4W1 530 aa10.9□□□□□ -0.66
CHMP4A-205ENST00000531158 SLC30A10Q6XR72 485 aa10.9□□□□□ -0.66
CHMP4A-205ENST00000531158 CHURC1Q8WUH1 139 aa10.9□□□□□ -0.66
CHMP4A-205ENST00000531158 FBXL18Q96ME1 805 aa10.9□□□□□ -0.66
CHMP4A-205ENST00000531158 AP5M1Q9H0R1 490 aa10.9□□□□□ -0.66
CHMP4A-205ENST00000531158 NAPBQ9H115 298 aa10.9□□□□□ -0.66
CHMP4A-205ENST00000531158 RANBP17Q9H2T7 1088 aaKnown RBP10.9□□□□□ -0.66
CHMP4A-205ENST00000531158 ZNF287Q9HBT7 754 aa10.9□□□□□ -0.66
CHMP4A-205ENST00000531158 VTA1Q9NP79 307 aa10.9□□□□□ -0.66
CHMP4A-205ENST00000531158 CCPG1Q9ULG6 757 aa10.9□□□□□ -0.66
CHMP4A-205ENST00000531158 ISY1Q9ULR0 285 aaKnown RBP10.9□□□□□ -0.66
CHMP4A-205ENST00000531158 PCDHA11Q9Y5I1 949 aa10.9□□□□□ -0.66
CHMP4A-205ENST00000531158 TNKSO95271 1327 aa10.89□□□□□ -0.67
CHMP4A-205ENST00000531158 RBM47A0AV96 593 aaKnown RBP10.89□□□□□ -0.67
CHMP4A-205ENST00000531158 ICAM1P05362 532 aa10.89□□□□□ -0.67
CHMP4A-205ENST00000531158 ATP2A2P16615 1042 aaKnown RBP10.89□□□□□ -0.67
CHMP4A-205ENST00000531158 IKQ13123 557 aaPredicted RBP10.89□□□□□ -0.67
CHMP4A-205ENST00000531158 BAATQ14032 418 aaPredicted RBP10.89□□□□□ -0.67
CHMP4A-205ENST00000531158 KIAA1211Q6ZU35 1233 aa10.89□□□□□ -0.67
CHMP4A-205ENST00000531158 CLEC4DQ8WXI8 215 aa10.89□□□□□ -0.67
CHMP4A-205ENST00000531158 CTAGE1Q96RT6 745 aa10.89□□□□□ -0.67
CHMP4A-205ENST00000531158 CERS4Q9HA82 394 aa10.89□□□□□ -0.67
CHMP4A-205ENST00000531158 MTMR7Q9Y216 660 aa10.89□□□□□ -0.67
CHMP4A-205ENST00000531158 SLC4A7Q9Y6M7 1214 aa10.89□□□□□ -0.67
CHMP4A-205ENST00000531158 TTC41PQ6P2S7 1318 aa10.88□□□□□ -0.67
CHMP4A-205ENST00000531158 ZBBXA8MT70 800 aa10.88□□□□□ -0.67
CHMP4A-205ENST00000531158 FGRP09769 529 aa10.88□□□□□ -0.67
CHMP4A-205ENST00000531158 POU3F3P20264 500 aaPredicted RBP10.88□□□□□ -0.67
CHMP4A-205ENST00000531158 GPNMBQ14956 572 aa10.88□□□□□ -0.67
CHMP4A-205ENST00000531158 CSPP1Q1MSJ5 1256 aa10.88□□□□□ -0.67
CHMP4A-205ENST00000531158 BTNL9Q6UXG8 535 aa10.88□□□□□ -0.67
CHMP4A-205ENST00000531158 DEFB128Q7Z7B8 93 aa10.88□□□□□ -0.67
CHMP4A-205ENST00000531158 COPS5Q92905 334 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms