RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 SLC43A3Q8NBI5 491 aa18.52■□□□□ 0.56
CPSF1-205ENST00000531042 TLR3O15455 904 aaKnown RBP18.51■□□□□ 0.55
CPSF1-205ENST00000531042 ZEB2O60315 1214 aa18.51■□□□□ 0.55
CPSF1-205ENST00000531042 CD4P01730 458 aa18.51■□□□□ 0.55
CPSF1-205ENST00000531042 CALML3P27482 149 aa18.51■□□□□ 0.55
CPSF1-205ENST00000531042 PNMA1Q8ND90 353 aa18.51■□□□□ 0.55
CPSF1-205ENST00000531042 ANKS1AQ92625 1134 aa18.51■□□□□ 0.55
CPSF1-205ENST00000531042 SEMA6BQ9H3T3 888 aa18.51■□□□□ 0.55
CPSF1-205ENST00000531042 B4E1Z4 1266 aa18.5■□□□□ 0.55
CPSF1-205ENST00000531042 RPS6P62753 249 aaKnown RBP18.5■□□□□ 0.55
CPSF1-205ENST00000531042 ITGA7Q13683 1181 aa18.5■□□□□ 0.55
CPSF1-205ENST00000531042 IMMTQ16891 758 aaKnown RBP18.5■□□□□ 0.55
CPSF1-205ENST00000531042 DUSP28Q4G0W2 176 aa18.5■□□□□ 0.55
CPSF1-205ENST00000531042 ZSCAN10Q96SZ4 725 aaPredicted RBP18.5■□□□□ 0.55
CPSF1-205ENST00000531042 UBA5Q9GZZ9 404 aa18.5■□□□□ 0.55
CPSF1-205ENST00000531042 CPVLQ9H3G5 476 aa18.5■□□□□ 0.55
CPSF1-205ENST00000531042 KAT14Q9H8E8 782 aa18.5■□□□□ 0.55
CPSF1-205ENST00000531042 CTNNA3Q9UI47 895 aa18.5■□□□□ 0.55
CPSF1-205ENST00000531042 SUPT16HQ9Y5B9 1047 aaKnown RBP18.5■□□□□ 0.55
CPSF1-205ENST00000531042 GRIN2DO15399 1336 aa18.49■□□□□ 0.55
CPSF1-205ENST00000531042 RBM47A0AV96 593 aaKnown RBP18.49■□□□□ 0.55
CPSF1-205ENST00000531042 PDE4AP27815 886 aa18.49■□□□□ 0.55
CPSF1-205ENST00000531042 PPIGQ13427 754 aaKnown RBP eCLIP18.49■□□□□ 0.552e-9■■■■□ 22.6
CPSF1-205ENST00000531042 ENAHQ8N8S7 591 aaPredicted RBP18.49■□□□□ 0.55
CPSF1-205ENST00000531042 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.49■□□□□ 0.552e-8■■■□□ 15.5
CPSF1-205ENST00000531042 SEZ6LQ9BYH1 1024 aa18.49■□□□□ 0.55
CPSF1-205ENST00000531042 WDR11Q9BZH6 1224 aa18.49■□□□□ 0.55
CPSF1-205ENST00000531042 IL25Q9H293 177 aa18.49■□□□□ 0.55
CPSF1-205ENST00000531042 ZSWIM5Q9P217 1185 aa18.49■□□□□ 0.55
CPSF1-205ENST00000531042 USH1GQ495M9 461 aa18.48■□□□□ 0.55
CPSF1-205ENST00000531042 C16orf59Q7L2K0 433 aa18.48■□□□□ 0.55
CPSF1-205ENST00000531042 TMEM199Q8N511 208 aa18.48■□□□□ 0.55
CPSF1-205ENST00000531042 RGS22Q8NE09 1264 aa18.48■□□□□ 0.55
CPSF1-205ENST00000531042 DNERQ8NFT8 737 aa18.48■□□□□ 0.55
CPSF1-205ENST00000531042 CDX2Q99626 313 aaPredicted RBP18.48■□□□□ 0.55
CPSF1-205ENST00000531042 PPP1R12CQ9BZL4 782 aa18.48■□□□□ 0.55
CPSF1-205ENST00000531042 KRT23Q9C075 422 aa18.48■□□□□ 0.55
CPSF1-205ENST00000531042 TTYH1Q9H313 450 aaPredicted RBP18.48■□□□□ 0.55
CPSF1-205ENST00000531042 TNKSO95271 1327 aa18.48■□□□□ 0.55
CPSF1-205ENST00000531042 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.47■□□□□ 0.55
CPSF1-205ENST00000531042 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.47■□□□□ 0.55
CPSF1-205ENST00000531042 CSF2RAP15509 400 aa18.47■□□□□ 0.55
CPSF1-205ENST00000531042 EDNRBP24530 442 aa18.47■□□□□ 0.55
CPSF1-205ENST00000531042 PDE4DQ08499 809 aa18.47■□□□□ 0.55
CPSF1-205ENST00000531042 TTC22Q5TAA0 569 aa18.47■□□□□ 0.55
CPSF1-205ENST00000531042 ADGRF4Q8IZF3 695 aa18.47■□□□□ 0.55
CPSF1-205ENST00000531042 MPHOSPH6Q99547 160 aaKnown RBP18.47■□□□□ 0.55
CPSF1-205ENST00000531042 CNNM2Q9H8M5 875 aa18.47■□□□□ 0.55
CPSF1-205ENST00000531042 UNC80Q8N2C7 3258 aa18.47■□□□□ 0.55
CPSF1-205ENST00000531042 DLL1O00548 723 aa18.46■□□□□ 0.55
CPSF1-205ENST00000531042 GSPT1P15170 499 aaKnown RBP18.46■□□□□ 0.55
CPSF1-205ENST00000531042 CYP2C18P33260 490 aa18.46■□□□□ 0.55
CPSF1-205ENST00000531042 PSMC6P62333 389 aa18.46■□□□□ 0.55
CPSF1-205ENST00000531042 CDC37Q16543 378 aaPredicted RBP18.46■□□□□ 0.55
CPSF1-205ENST00000531042 ASPRV1Q53RT3 343 aa18.46■□□□□ 0.55
CPSF1-205ENST00000531042 TMEM240Q5SV17 173 aa18.46■□□□□ 0.55
CPSF1-205ENST00000531042 MAF1Q9H063 256 aa18.46■□□□□ 0.55
CPSF1-205ENST00000531042 POLR3EQ9NVU0 708 aa18.46■□□□□ 0.55
CPSF1-205ENST00000531042 EYSQ5T1H1 3165 aa18.46■□□□□ 0.55
CPSF1-205ENST00000531042 TMEM265A0A087WTH1 108 aa18.45■□□□□ 0.54
CPSF1-205ENST00000531042 B4DLN1 442 aa18.45■□□□□ 0.54
CPSF1-205ENST00000531042 CPT1AP50416 773 aa18.45■□□□□ 0.54
CPSF1-205ENST00000531042 MRPL12P52815 198 aaKnown RBP18.45■□□□□ 0.54
CPSF1-205ENST00000531042 RASIP1Q5U651 963 aa18.45■□□□□ 0.54
CPSF1-205ENST00000531042 TBC1D5Q92609 795 aa18.45■□□□□ 0.54
CPSF1-205ENST00000531042 TRPV6Q9H1D0 765 aa18.45■□□□□ 0.54
CPSF1-205ENST00000531042 HIPK3Q9H422 1215 aa18.45■□□□□ 0.54
CPSF1-205ENST00000531042 ABCB11O95342 1321 aa18.45■□□□□ 0.54
CPSF1-205ENST00000531042 MYH6P13533 1939 aa18.45■□□□□ 0.54
CPSF1-205ENST00000531042 NKRFO15226 690 aaKnown RBP eCLIP18.44■□□□□ 0.54
CPSF1-205ENST00000531042 B4GALT4O60513 344 aa18.44■□□□□ 0.54
CPSF1-205ENST00000531042 PARP1P09874 1014 aaKnown RBP18.44■□□□□ 0.54
CPSF1-205ENST00000531042 ACRP10323 421 aa18.44■□□□□ 0.54
CPSF1-205ENST00000531042 PURAQ00577 322 aaKnown RBP18.44■□□□□ 0.54
CPSF1-205ENST00000531042 PPP2R5BQ15173 497 aa18.44■□□□□ 0.54
CPSF1-205ENST00000531042 ZNF365Q70YC5 407 aa18.44■□□□□ 0.54
CPSF1-205ENST00000531042 OR6J1Q8NGC5 347 aa18.44■□□□□ 0.54
CPSF1-205ENST00000531042 SCFD2Q8WU76 684 aa18.44■□□□□ 0.54
CPSF1-205ENST00000531042 UBAC1Q9BSL1 405 aa18.44■□□□□ 0.54
CPSF1-205ENST00000531042 IL23AQ9NPF7 189 aa18.44■□□□□ 0.54
CPSF1-205ENST00000531042 CDH23Q9H251 3354 aa18.44■□□□□ 0.54
CPSF1-205ENST00000531042 UMODL1Q5DID0 1318 aa18.44■□□□□ 0.54
CPSF1-205ENST00000531042 RAD50Q92878 1312 aa18.44■□□□□ 0.54
CPSF1-205ENST00000531042 MYL3P08590 195 aa18.43■□□□□ 0.54
CPSF1-205ENST00000531042 DNAJB2P25686 324 aa18.43■□□□□ 0.54
CPSF1-205ENST00000531042 QRICH1Q2TAL8 776 aa18.43■□□□□ 0.54
CPSF1-205ENST00000531042 IFIT1BQ5T764 474 aaKnown RBP18.43■□□□□ 0.54
CPSF1-205ENST00000531042 PSRC1Q6PGN9 363 aaPredicted RBP18.43■□□□□ 0.54
CPSF1-205ENST00000531042 CYB5R4Q7L1T6 521 aa18.43■□□□□ 0.54
CPSF1-205ENST00000531042 MYLIPQ8WY64 445 aa18.43■□□□□ 0.54
CPSF1-205ENST00000531042 NOC4LQ9BVI4 516 aaKnown RBP18.43■□□□□ 0.54
CPSF1-205ENST00000531042 ALDH8A1Q9H2A2 487 aaPredicted RBP18.43■□□□□ 0.54
CPSF1-205ENST00000531042 JMJD4Q9H9V9 463 aa18.43■□□□□ 0.54
CPSF1-205ENST00000531042 VAT1LQ9HCJ6 419 aa18.43■□□□□ 0.54
CPSF1-205ENST00000531042 DHX16O60231 1041 aaKnown RBP18.42■□□□□ 0.54
CPSF1-205ENST00000531042 TXNP10599 105 aaKnown RBP18.42■□□□□ 0.54
CPSF1-205ENST00000531042 SEC23AQ15436 765 aa18.42■□□□□ 0.54
CPSF1-205ENST00000531042 BRDTQ58F21 947 aaPredicted RBP18.42■□□□□ 0.54
CPSF1-205ENST00000531042 FBXO11Q86XK2 927 aa18.42■□□□□ 0.54
CPSF1-205ENST00000531042 MCF2L2Q86YR7 1114 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms