RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 Q6ZUG5 572 aa21.73■■□□□ 1.07
GMDS-208ENST00000530927 MAP3K14Q99558 947 aa21.73■■□□□ 1.07
GMDS-208ENST00000530927 ABHD16BQ9H3Z7 469 aa21.73■■□□□ 1.07
GMDS-208ENST00000530927 XPNPEP3Q9NQH7 507 aa21.73■■□□□ 1.07
GMDS-208ENST00000530927 PCDHA1Q9Y5I3 950 aa21.73■■□□□ 1.07
GMDS-208ENST00000530927 MYADML2A6NDP7 307 aa21.72■■□□□ 1.07
GMDS-208ENST00000530927 RARBP10826 455 aa21.72■■□□□ 1.07
GMDS-208ENST00000530927 CASTP20810 708 aaKnown RBP21.72■■□□□ 1.07
GMDS-208ENST00000530927 APOBRQ0VD83 1088 aa21.72■■□□□ 1.07
GMDS-208ENST00000530927 LRRC41Q15345 812 aa21.72■■□□□ 1.07
GMDS-208ENST00000530927 BLOC1S2Q6QNY1 142 aa21.72■■□□□ 1.07
GMDS-208ENST00000530927 FANCBQ8NB91 859 aa21.72■■□□□ 1.07
GMDS-208ENST00000530927 SYTL5Q8TDW5 730 aaPredicted RBP21.72■■□□□ 1.07
GMDS-208ENST00000530927 TAAR1Q96RJ0 339 aa21.72■■□□□ 1.07
GMDS-208ENST00000530927 PNMA2Q9UL42 364 aa21.72■■□□□ 1.07
GMDS-208ENST00000530927 MRPL11Q9Y3B7 192 aaKnown RBP21.72■■□□□ 1.07
GMDS-208ENST00000530927 KLF18A0A0U1RQI7 1052 aa21.72■■□□□ 1.07
GMDS-208ENST00000530927 ASB14A6NK59 587 aa21.72■■□□□ 1.07
GMDS-208ENST00000530927 CFBP00751 764 aa21.72■■□□□ 1.07
GMDS-208ENST00000530927 RPS6KB1P23443 525 aa21.72■■□□□ 1.07
GMDS-208ENST00000530927 KIF5BP33176 963 aa21.72■■□□□ 1.07
GMDS-208ENST00000530927 ADCYAP1R1P41586 468 aa21.72■■□□□ 1.07
GMDS-208ENST00000530927 SPZ1Q9BXG8 430 aa21.72■■□□□ 1.07
GMDS-208ENST00000530927 FAM184BQ9ULE4 1060 aa21.72■■□□□ 1.07
GMDS-208ENST00000530927 NAP1L2Q9ULW6 460 aaPredicted RBP21.72■■□□□ 1.07
GMDS-208ENST00000530927 PNMA6FA0A0J9YX94 578 aa21.71■■□□□ 1.07
GMDS-208ENST00000530927 SEC24BO95487 1268 aa21.71■■□□□ 1.07
GMDS-208ENST00000530927 HOXA13P31271 388 aaPredicted RBP21.71■■□□□ 1.07
GMDS-208ENST00000530927 TAPT1Q6NXT6 567 aa21.71■■□□□ 1.07
GMDS-208ENST00000530927 TMTC3Q6ZXV5 915 aa21.71■■□□□ 1.07
GMDS-208ENST00000530927 MORC4Q8TE76 937 aa21.71■■□□□ 1.07
GMDS-208ENST00000530927 SENP6Q9GZR1 1112 aaPredicted RBP21.71■■□□□ 1.07
GMDS-208ENST00000530927 SYNRGQ9UMZ2 1314 aa21.71■■□□□ 1.07
GMDS-208ENST00000530927 DNM1LO00429 736 aa21.7■■□□□ 1.06
GMDS-208ENST00000530927 ADAMTS4O75173 837 aa21.7■■□□□ 1.06
GMDS-208ENST00000530927 HMGB1P09429 215 aaKnown RBP21.7■■□□□ 1.06
GMDS-208ENST00000530927 LRRC26Q2I0M4 334 aa21.7■■□□□ 1.06
GMDS-208ENST00000530927 RGS22Q8NE09 1264 aa21.7■■□□□ 1.06
GMDS-208ENST00000530927 BRF1Q92994 677 aa21.7■■□□□ 1.06
GMDS-208ENST00000530927 FERMT2Q96AC1 680 aa21.7■■□□□ 1.06
GMDS-208ENST00000530927 HTATIP2Q9BUP3 242 aa21.7■■□□□ 1.06
GMDS-208ENST00000530927 ADD3Q9UEY8 706 aaKnown RBP21.7■■□□□ 1.06
GMDS-208ENST00000530927 ZBTB43O43298 467 aa21.69■■□□□ 1.06
GMDS-208ENST00000530927 CALM1P0DP23 149 aa21.69■■□□□ 1.06
GMDS-208ENST00000530927 CALM2P0DP24 149 aa21.69■■□□□ 1.06
GMDS-208ENST00000530927 CALM3P0DP25 149 aa21.69■■□□□ 1.06
GMDS-208ENST00000530927 CAPN2P17655 700 aa21.69■■□□□ 1.06
GMDS-208ENST00000530927 CDC27P30260 824 aa21.69■■□□□ 1.06
GMDS-208ENST00000530927 ATN1P54259 1190 aaPredicted RBP21.69■■□□□ 1.06
GMDS-208ENST00000530927 FGD1P98174 961 aa21.69■■□□□ 1.06
GMDS-208ENST00000530927 LARP6Q9BRS8 491 aaKnown RBP21.69■■□□□ 1.06
GMDS-208ENST00000530927 UPF3BQ9BZI7 483 aaKnown RBP21.69■■□□□ 1.06
GMDS-208ENST00000530927 FAM217BQ9NTX9 383 aaPredicted RBP21.69■■□□□ 1.06
GMDS-208ENST00000530927 GOLGA8AA7E2F4 631 aa21.68■■□□□ 1.06
GMDS-208ENST00000530927 GOLGA8BA8MQT2 603 aa21.68■■□□□ 1.06
GMDS-208ENST00000530927 H0YGN5 161 aa21.68■■□□□ 1.06
GMDS-208ENST00000530927 SMPD1P17405 629 aa21.68■■□□□ 1.06
GMDS-208ENST00000530927 HSD17B4P51659 736 aa21.68■■□□□ 1.06
GMDS-208ENST00000530927 RTN1Q16799 776 aa21.68■■□□□ 1.06
GMDS-208ENST00000530927 SYNE3Q6ZMZ3 975 aa21.68■■□□□ 1.06
GMDS-208ENST00000530927 MCF2L2Q86YR7 1114 aa21.68■■□□□ 1.06
GMDS-208ENST00000530927 ARRDC4Q8NCT1 418 aa21.68■■□□□ 1.06
GMDS-208ENST00000530927 RRP36Q96EU6 259 aaKnown RBP21.68■■□□□ 1.06
GMDS-208ENST00000530927 CNTNAP5Q8WYK1 1306 aa21.67■■□□□ 1.06
GMDS-208ENST00000530927 EIF2AK2P19525 551 aaKnown RBP21.67■■□□□ 1.06
GMDS-208ENST00000530927 EDNRBP24530 442 aa21.67■■□□□ 1.06
GMDS-208ENST00000530927 GNAQP50148 359 aa21.67■■□□□ 1.06
GMDS-208ENST00000530927 TNFAIP2Q03169 654 aa21.67■■□□□ 1.06
GMDS-208ENST00000530927 PRPF38BQ5VTL8 546 aaKnown RBP21.67■■□□□ 1.06
GMDS-208ENST00000530927 C7orf61Q8IZ16 206 aa21.67■■□□□ 1.06
GMDS-208ENST00000530927 KBTBD13C9JR72 458 aa21.66■■□□□ 1.06
GMDS-208ENST00000530927 CTAGE5O15320 804 aa21.66■■□□□ 1.06
GMDS-208ENST00000530927 EPB41L2O43491 1005 aaKnown RBP21.66■■□□□ 1.06
GMDS-208ENST00000530927 DUSP11O75319 330 aaKnown RBP21.66■■□□□ 1.06
GMDS-208ENST00000530927 BEX3Q00994 111 aa21.66■■□□□ 1.06
GMDS-208ENST00000530927 PDE4DQ08499 809 aa21.66■■□□□ 1.06
GMDS-208ENST00000530927 FUT2Q10981 343 aa21.66■■□□□ 1.06
GMDS-208ENST00000530927 NOL8Q76FK4 1167 aaKnown RBP21.66■■□□□ 1.06
GMDS-208ENST00000530927 RUFY3Q7L099 469 aa21.66■■□□□ 1.06
GMDS-208ENST00000530927 DNERQ8NFT8 737 aa21.66■■□□□ 1.06
GMDS-208ENST00000530927 ZFP91Q96JP5 570 aaPredicted RBP21.66■■□□□ 1.06
GMDS-208ENST00000530927 RMDN3Q96TC7 470 aa21.66■■□□□ 1.06
GMDS-208ENST00000530927 LZTS2Q9BRK4 669 aa21.66■■□□□ 1.06
GMDS-208ENST00000530927 ZSWIM6Q9HCJ5 1215 aa21.66■■□□□ 1.06
GMDS-208ENST00000530927 EVI5O60447 810 aa21.65■■□□□ 1.06
GMDS-208ENST00000530927 PPFIA3O75145 1194 aa21.65■■□□□ 1.06
GMDS-208ENST00000530927 PSMA5P28066 241 aa21.65■■□□□ 1.06
GMDS-208ENST00000530927 ADD1P35611 737 aaKnown RBP21.65■■□□□ 1.06
GMDS-208ENST00000530927 TOB2Q14106 344 aaPredicted RBP21.65■■□□□ 1.06
GMDS-208ENST00000530927 KLHDC9Q8NEP7 349 aa21.65■■□□□ 1.06
GMDS-208ENST00000530927 GPKOWQ92917 476 aaPredicted RBP eCLIP21.65■■□□□ 1.06
GMDS-208ENST00000530927 VTA1Q9NP79 307 aa21.65■■□□□ 1.06
GMDS-208ENST00000530927 SEC63Q9UGP8 760 aaKnown RBP21.65■■□□□ 1.06
GMDS-208ENST00000530927 GNEQ9Y223 722 aaKnown RBP21.65■■□□□ 1.06
GMDS-208ENST00000530927 C6orf222P0C671 652 aaPredicted RBP21.64■■□□□ 1.06
GMDS-208ENST00000530927 SMARCA1P28370 1054 aa21.64■■□□□ 1.06
GMDS-208ENST00000530927 GHRHRQ02643 423 aa21.64■■□□□ 1.06
GMDS-208ENST00000530927 RNF180Q86T96 592 aa21.64■■□□□ 1.06
GMDS-208ENST00000530927 FCHSD1Q86WN1 690 aa21.64■■□□□ 1.06
GMDS-208ENST00000530927 IL31RAQ8NI17 732 aa21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms