RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 PNLIPP16233 465 aa10.73□□□□□ -0.69
CSDE1-213ENST00000530784 PRKCAP17252 672 aa10.73□□□□□ -0.69
CSDE1-213ENST00000530784 ZNF124Q15973 351 aa10.73□□□□□ -0.69
CSDE1-213ENST00000530784 MRM1Q6IN84 353 aaKnown RBP10.73□□□□□ -0.69
CSDE1-213ENST00000530784 RCSD1Q6JBY9 416 aa10.73□□□□□ -0.69
CSDE1-213ENST00000530784 CYP2R1Q6VVX0 501 aa10.73□□□□□ -0.69
CSDE1-213ENST00000530784 FBXO15Q8NCQ5 510 aaPredicted RBP10.73□□□□□ -0.69
CSDE1-213ENST00000530784 BVESQ8NE79 360 aa10.73□□□□□ -0.69
CSDE1-213ENST00000530784 IMPACTQ9P2X3 320 aa10.73□□□□□ -0.69
CSDE1-213ENST00000530784 MAGI3Q5TCQ9 1506 aa10.73□□□□□ -0.69
CSDE1-213ENST00000530784 KCNH1O95259 989 aa10.72□□□□□ -0.69
CSDE1-213ENST00000530784 SDHBP21912 280 aa10.72□□□□□ -0.69
CSDE1-213ENST00000530784 ADGRF1Q5T601 910 aa10.72□□□□□ -0.69
CSDE1-213ENST00000530784 SYDE1Q6ZW31 735 aaPredicted RBP10.72□□□□□ -0.69
CSDE1-213ENST00000530784 JAMLQ86YT9 394 aa10.72□□□□□ -0.69
CSDE1-213ENST00000530784 CELF2-AS1Q8N7Q2 184 aa10.72□□□□□ -0.69
CSDE1-213ENST00000530784 NUP43Q8NFH3 380 aa10.72□□□□□ -0.69
CSDE1-213ENST00000530784 SLC38A3Q99624 504 aa10.72□□□□□ -0.69
CSDE1-213ENST00000530784 ACSL6Q9UKU0 697 aa10.72□□□□□ -0.69
CSDE1-213ENST00000530784 R3HCC1Q9Y3T6 440 aaKnown RBP10.72□□□□□ -0.69
CSDE1-213ENST00000530784 CD109Q6YHK3 1445 aa10.72□□□□□ -0.69
CSDE1-213ENST00000530784 CFAP43Q8NDM7 1665 aa10.72□□□□□ -0.69
CSDE1-213ENST00000530784 C2orf71A6NGG8 1288 aa10.71□□□□□ -0.69
CSDE1-213ENST00000530784 GJB6O95452 261 aa10.71□□□□□ -0.69
CSDE1-213ENST00000530784 EEF1DP3Q658K8 133 aa10.71□□□□□ -0.69
CSDE1-213ENST00000530784 ZNF605Q86T29 641 aa10.71□□□□□ -0.69
CSDE1-213ENST00000530784 FAM9AQ8IZU1 332 aaPredicted RBP10.71□□□□□ -0.69
CSDE1-213ENST00000530784 ST7Q9NRC1 585 aa10.71□□□□□ -0.69
CSDE1-213ENST00000530784 BACE2Q9Y5Z0 518 aa10.71□□□□□ -0.69
CSDE1-213ENST00000530784 NOP56O00567 594 aaKnown RBP10.7□□□□□ -0.7
CSDE1-213ENST00000530784 KLF4O43474 513 aa10.7□□□□□ -0.7
CSDE1-213ENST00000530784 SUSD5O60279 629 aa10.7□□□□□ -0.7
CSDE1-213ENST00000530784 TBC1D8O95759 1140 aa10.7□□□□□ -0.7
CSDE1-213ENST00000530784 SV2CQ496J9 727 aa10.7□□□□□ -0.7
CSDE1-213ENST00000530784 ZNF552Q9H707 407 aaPredicted RBP10.7□□□□□ -0.7
CSDE1-213ENST00000530784 OR14I1A6ND48 311 aa10.69□□□□□ -0.7
CSDE1-213ENST00000530784 SEPHS1P49903 392 aa10.69□□□□□ -0.7
CSDE1-213ENST00000530784 CYP4F8P98187 520 aa10.69□□□□□ -0.7
CSDE1-213ENST00000530784 MVKQ03426 396 aa10.69□□□□□ -0.7
CSDE1-213ENST00000530784 POMZP3Q6PJE2 187 aa10.69□□□□□ -0.7
CSDE1-213ENST00000530784 MRGPRX3Q96LB0 322 aa10.69□□□□□ -0.7
CSDE1-213ENST00000530784 MSL3P1P0C860 447 aa10.68□□□□□ -0.7
CSDE1-213ENST00000530784 LAPTM5Q13571 262 aa10.68□□□□□ -0.7
CSDE1-213ENST00000530784 PKN1Q16512 942 aa10.68□□□□□ -0.7
CSDE1-213ENST00000530784 GTF2IRD2BQ6EKJ0 949 aa10.68□□□□□ -0.7
CSDE1-213ENST00000530784 GTF2IRD2Q86UP8 949 aa10.68□□□□□ -0.7
CSDE1-213ENST00000530784 TRIM59Q8IWR1 403 aa10.68□□□□□ -0.7
CSDE1-213ENST00000530784 CRACR2BQ8N4Y2 399 aaPredicted RBP10.68□□□□□ -0.7
CSDE1-213ENST00000530784 MYOCOSA0A1B0GUC4 107 aa10.67□□□□□ -0.7
CSDE1-213ENST00000530784 A0A1W2PQ27 194 aa10.67□□□□□ -0.7
CSDE1-213ENST00000530784 A0A1W2PQ64 194 aa10.67□□□□□ -0.7
CSDE1-213ENST00000530784 A0A1W2PQC6 194 aa10.67□□□□□ -0.7
CSDE1-213ENST00000530784 A0A1W2PQD8 194 aa10.67□□□□□ -0.7
CSDE1-213ENST00000530784 ITGAVP06756 1048 aa10.67□□□□□ -0.7
CSDE1-213ENST00000530784 ERVFRD-1P60508 538 aa10.67□□□□□ -0.7
CSDE1-213ENST00000530784 C8orf37Q96NL8 207 aa10.67□□□□□ -0.7
CSDE1-213ENST00000530784 SLC26A8Q96RN1 970 aa10.67□□□□□ -0.7
CSDE1-213ENST00000530784 MCOLN1Q9GZU1 580 aa10.67□□□□□ -0.7
CSDE1-213ENST00000530784 SAMD9Q5K651 1589 aa10.67□□□□□ -0.7
CSDE1-213ENST00000530784 TBX1O43435 398 aa10.66□□□□□ -0.7
CSDE1-213ENST00000530784 KRT1P04264 644 aa10.66□□□□□ -0.7
CSDE1-213ENST00000530784 YBX3P16989 372 aaKnown RBP eCLIP10.66□□□□□ -0.72e-12■■■□□ 16.7
CSDE1-213ENST00000530784 L1CAMP32004 1257 aa10.66□□□□□ -0.7
CSDE1-213ENST00000530784 ARL4AP40617 200 aa10.66□□□□□ -0.7
CSDE1-213ENST00000530784 DDR2Q16832 855 aa10.66□□□□□ -0.7
CSDE1-213ENST00000530784 BHLHE22Q8NFJ8 381 aaPredicted RBP10.66□□□□□ -0.7
CSDE1-213ENST00000530784 TANGO6Q9C0B7 1094 aa10.66□□□□□ -0.7
CSDE1-213ENST00000530784 GPRC5CQ9NQ84 441 aa10.66□□□□□ -0.7
CSDE1-213ENST00000530784 LRP2BPQ9P2M1 347 aa10.66□□□□□ -0.7
CSDE1-213ENST00000530784 ATP10BO94823 1461 aa10.66□□□□□ -0.7
CSDE1-213ENST00000530784 STK10O94804 968 aaKnown RBP10.65□□□□□ -0.7
CSDE1-213ENST00000530784 SCRN1Q12765 414 aa10.65□□□□□ -0.7
CSDE1-213ENST00000530784 EEPD1Q7L9B9 569 aa10.65□□□□□ -0.7
CSDE1-213ENST00000530784 CPNE8Q86YQ8 564 aa10.65□□□□□ -0.7
CSDE1-213ENST00000530784 COPS5Q92905 334 aa10.65□□□□□ -0.7
CSDE1-213ENST00000530784 KCNN1Q92952 543 aa10.65□□□□□ -0.7
CSDE1-213ENST00000530784 PPP1R16BQ96T49 567 aa10.65□□□□□ -0.7
CSDE1-213ENST00000530784 EEA1Q15075 1411 aa10.65□□□□□ -0.7
CSDE1-213ENST00000530784 PEX10O60683 326 aa10.64□□□□□ -0.71
CSDE1-213ENST00000530784 C1QTNF9P0C862 333 aa10.64□□□□□ -0.71
CSDE1-213ENST00000530784 ZNF227Q86WZ6 799 aa10.64□□□□□ -0.71
CSDE1-213ENST00000530784 BTN2A2Q8WVV5 523 aa10.64□□□□□ -0.71
CSDE1-213ENST00000530784 NKX2-4Q9H2Z4 354 aa10.64□□□□□ -0.71
CSDE1-213ENST00000530784 TNFRSF12AQ9NP84 129 aa10.64□□□□□ -0.71
CSDE1-213ENST00000530784 CYP26B1Q9NR63 512 aa10.64□□□□□ -0.71
CSDE1-213ENST00000530784 RAPGEF6Q8TEU7 1601 aa10.64□□□□□ -0.71
CSDE1-213ENST00000530784 ARAP3Q8WWN8 1544 aa10.63□□□□□ -0.71
CSDE1-213ENST00000530784 ABCA9Q8IUA7 1624 aa10.63□□□□□ -0.71
CSDE1-213ENST00000530784 ETV2O00321 342 aaPredicted RBP10.63□□□□□ -0.71
CSDE1-213ENST00000530784 TSPAN15O95858 294 aa10.63□□□□□ -0.71
CSDE1-213ENST00000530784 MPOP05164 745 aa10.63□□□□□ -0.71
CSDE1-213ENST00000530784 TMEM253P0C7T8 217 aa10.63□□□□□ -0.71
CSDE1-213ENST00000530784 PAMP19021 973 aa10.63□□□□□ -0.71
CSDE1-213ENST00000530784 ATP2B1P20020 1258 aa10.63□□□□□ -0.71
CSDE1-213ENST00000530784 CYP4F3Q08477 520 aa10.63□□□□□ -0.71
CSDE1-213ENST00000530784 RAB33AQ14088 237 aa10.63□□□□□ -0.71
CSDE1-213ENST00000530784 PDLIM7Q9NR12 457 aa10.63□□□□□ -0.71
CSDE1-213ENST00000530784 CLEC1BQ9P126 229 aa10.63□□□□□ -0.71
CSDE1-213ENST00000530784 HECW2Q9P2P5 1572 aa10.63□□□□□ -0.71
CSDE1-213ENST00000530784 NPHP3-ACAD11A0A0J9YXS1 232 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms