RNA–Protein interactions for RNA: ENST00000529689.5

CCDC90B-214, Transcript of coiled-coil domain containing 90B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC90B, Length 4,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-214ENST00000529689 TECPR2O15040 1411 aa10.95□□□□□ -0.66
CCDC90B-214ENST00000529689 SFI1A8K8P3 1242 aa10.95□□□□□ -0.66
CCDC90B-214ENST00000529689 ERVV-1B6SEH8 477 aa10.95□□□□□ -0.66
CCDC90B-214ENST00000529689 KRT71Q3SY84 523 aa10.95□□□□□ -0.66
CCDC90B-214ENST00000529689 WDR78Q5VTH9 848 aa10.95□□□□□ -0.66
CCDC90B-214ENST00000529689 MYO1AQ9UBC5 1043 aa10.95□□□□□ -0.66
CCDC90B-214ENST00000529689 PACSIN2Q9UNF0 486 aaPredicted RBP10.95□□□□□ -0.66
CCDC90B-214ENST00000529689 HYOU1Q9Y4L1 999 aa10.95□□□□□ -0.66
CCDC90B-214ENST00000529689 CCNE1P24864 410 aa10.95□□□□□ -0.66
CCDC90B-214ENST00000529689 EEF1GP26641 437 aaKnown RBP10.95□□□□□ -0.66
CCDC90B-214ENST00000529689 KLK7P49862 253 aa10.95□□□□□ -0.66
CCDC90B-214ENST00000529689 CCDC121Q6ZUS5 278 aa10.95□□□□□ -0.66
CCDC90B-214ENST00000529689 TMC4Q7Z404 712 aa10.95□□□□□ -0.66
CCDC90B-214ENST00000529689 FAM133AQ8N9E0 248 aa10.95□□□□□ -0.66
CCDC90B-214ENST00000529689 PROCA1Q8NCQ7 364 aaPredicted RBP10.95□□□□□ -0.66
CCDC90B-214ENST00000529689 KCNK9Q9NPC2 374 aa10.95□□□□□ -0.66
CCDC90B-214ENST00000529689 HOMER2Q9NSB8 354 aa10.95□□□□□ -0.66
CCDC90B-214ENST00000529689 ADD3Q9UEY8 706 aaKnown RBP10.95□□□□□ -0.66
CCDC90B-214ENST00000529689 DDX25Q9UHL0 483 aaKnown RBP10.95□□□□□ -0.66
CCDC90B-214ENST00000529689 TRIM66O15016 1216 aa10.94□□□□□ -0.66
CCDC90B-214ENST00000529689 VIMP08670 466 aaKnown RBP10.94□□□□□ -0.66
CCDC90B-214ENST00000529689 VPS41P49754 854 aa10.94□□□□□ -0.66
CCDC90B-214ENST00000529689 MAP3K9P80192 1104 aa10.94□□□□□ -0.66
CCDC90B-214ENST00000529689 NR1I3Q14994 352 aa10.94□□□□□ -0.66
CCDC90B-214ENST00000529689 GOLGA5Q8TBA6 731 aa10.94□□□□□ -0.66
CCDC90B-214ENST00000529689 TMEM47Q9BQJ4 181 aa10.94□□□□□ -0.66
CCDC90B-214ENST00000529689 PCDHA1Q9Y5I3 950 aa10.94□□□□□ -0.66
CCDC90B-214ENST00000529689 DIP2AQ14689 1571 aa10.94□□□□□ -0.66
CCDC90B-214ENST00000529689 RFX7Q2KHR2 1363 aa10.94□□□□□ -0.66
CCDC90B-214ENST00000529689 MYO5BQ9ULV0 1848 aa10.94□□□□□ -0.66
CCDC90B-214ENST00000529689 ACTN4O43707 911 aaKnown RBP10.94□□□□□ -0.66
CCDC90B-214ENST00000529689 BUB1BO60566 1050 aaPredicted RBP10.94□□□□□ -0.66
CCDC90B-214ENST00000529689 GYPCP04921 128 aa10.94□□□□□ -0.66
CCDC90B-214ENST00000529689 EPB41P11171 864 aaKnown RBP10.94□□□□□ -0.66
CCDC90B-214ENST00000529689 EEF2P13639 858 aaKnown RBP10.94□□□□□ -0.66
CCDC90B-214ENST00000529689 TNFAIP3P21580 790 aa10.94□□□□□ -0.66
CCDC90B-214ENST00000529689 PLA2G4AP47712 749 aa10.94□□□□□ -0.66
CCDC90B-214ENST00000529689 TRAPPC10P48553 1259 aa10.94□□□□□ -0.66
CCDC90B-214ENST00000529689 GRIPAP1Q4V328 841 aa10.94□□□□□ -0.66
CCDC90B-214ENST00000529689 CCDC174Q6PII3 467 aa10.94□□□□□ -0.66
CCDC90B-214ENST00000529689 ZNF579Q8NAF0 562 aaKnown RBP10.94□□□□□ -0.66
CCDC90B-214ENST00000529689 FAM71BQ8TC56 605 aa10.94□□□□□ -0.66
CCDC90B-214ENST00000529689 CAPS2Q9BXY5 557 aa10.94□□□□□ -0.66
CCDC90B-214ENST00000529689 NDST4Q9H3R1 872 aa10.94□□□□□ -0.66
CCDC90B-214ENST00000529689 ARMCX3Q9UH62 379 aaPredicted RBP10.94□□□□□ -0.66
CCDC90B-214ENST00000529689 HARSP12081 509 aaKnown RBP10.94□□□□□ -0.66
CCDC90B-214ENST00000529689 KLRK1P26718 216 aa10.94□□□□□ -0.66
CCDC90B-214ENST00000529689 KIF11P52732 1056 aa10.94□□□□□ -0.66
CCDC90B-214ENST00000529689 ZBED6P86452 979 aa10.94□□□□□ -0.66
CCDC90B-214ENST00000529689 ALX1Q15699 326 aa10.94□□□□□ -0.66
CCDC90B-214ENST00000529689 NFRKBQ6P4R8 1299 aa10.94□□□□□ -0.66
CCDC90B-214ENST00000529689 KIF20BQ96Q89 1820 aa10.94□□□□□ -0.66
CCDC90B-214ENST00000529689 USP32Q8NFA0 1604 aa10.94□□□□□ -0.66
CCDC90B-214ENST00000529689 HEXIM1O94992 359 aaKnown RBP10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 RPL13P26373 211 aaKnown RBP10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 PLCB3Q01970 1234 aa10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 PPFIA1Q13136 1202 aa10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 PAK2Q13177 524 aa10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 NTRK3Q16288 839 aa10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 PFKFB3Q16875 520 aaPredicted RBP10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 TMEM60Q9H2L4 133 aa10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 CTTNBP2NLQ9P2B4 639 aa10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 RIMS1Q86UR5 1692 aaKnown RBP10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 A0A1B0GTH6 734 aa10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 SPOPO43791 374 aa10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 EXOC3O60645 756 aa10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 CTNNA2P26232 953 aa10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 E2F4Q16254 413 aa10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 CCDC50Q8IVM0 306 aa10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 MGARPQ8TDB4 240 aa10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 LMBR1Q8WVP7 490 aa10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 FAM212AQ96EL1 285 aa10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 MMS19Q96T76 1030 aa10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 MAP3K14Q99558 947 aa10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 TAOK3Q9H2K8 898 aa10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 DUSP10Q9Y6W6 482 aa10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 STK36Q9NRP7 1315 aa10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 USP17L5A8MUK1 530 aa10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 SORBS3O60504 671 aa10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 XRCC5P13010 732 aaKnown RBP10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 TCP1P17987 556 aaKnown RBP10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 NR2F2P24468 414 aa10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 STK4Q13043 487 aa10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 FAM196AQ6ZSG2 479 aa10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 STXBP4Q6ZWJ1 553 aa10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 DHTKD1Q96HY7 919 aaPredicted RBP10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 AP1M1Q9BXS5 423 aa10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 AGXT2Q9BYV1 514 aa10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 NFU1Q9UMS0 254 aa10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 THRAP3Q9Y2W1 955 aaKnown RBP10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 LGALS16A8MUM7 142 aa10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 MYO1CO00159 1063 aa10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 KRIT1O00522 736 aa10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 ECM2O94769 699 aaPredicted RBP10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 CTNNA1P35221 906 aaKnown RBP10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 CDK8P49336 464 aa10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 GFPT1Q06210 699 aaPredicted RBP10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 TBC1D9BQ66K14 1250 aa10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 MSL1Q68DK7 614 aa10.93□□□□□ -0.66
CCDC90B-214ENST00000529689 CCDC155Q8N6L0 562 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms