RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 KCNT2Q6UVM3 1135 aa7.05□□□□□ -1.28
CTR9-204ENST00000529355 ATG4DQ86TL0 474 aaPredicted RBP7.05□□□□□ -1.28
CTR9-204ENST00000529355 KSR1Q8IVT5 923 aa7.05□□□□□ -1.28
CTR9-204ENST00000529355 ANKS4BQ8N8V4 417 aa7.05□□□□□ -1.28
CTR9-204ENST00000529355 DPF3Q92784 378 aa7.05□□□□□ -1.28
CTR9-204ENST00000529355 ZNF669Q96BR6 464 aaPredicted RBP7.05□□□□□ -1.28
CTR9-204ENST00000529355 KIRREL1Q96J84 757 aa7.05□□□□□ -1.28
CTR9-204ENST00000529355 RNPC3Q96LT9 517 aaKnown RBP7.05□□□□□ -1.28
CTR9-204ENST00000529355 GULP1Q9UBP9 304 aa7.05□□□□□ -1.28
CTR9-204ENST00000529355 PTCH2Q9Y6C5 1203 aa7.05□□□□□ -1.28
CTR9-204ENST00000529355 ASXL2Q76L83 1435 aa7.04□□□□□ -1.28
CTR9-204ENST00000529355 NPHP3-ACAD11A0A0J9YXS1 232 aa7.04□□□□□ -1.28
CTR9-204ENST00000529355 C7orf72A4D263 438 aa7.04□□□□□ -1.28
CTR9-204ENST00000529355 FITM1A5D6W6 292 aa7.04□□□□□ -1.28
CTR9-204ENST00000529355 ZNF503-AS2A6NEH8 195 aa7.04□□□□□ -1.28
CTR9-204ENST00000529355 FGFR1P11362 822 aa7.04□□□□□ -1.28
CTR9-204ENST00000529355 PRKCAP17252 672 aa7.04□□□□□ -1.28
CTR9-204ENST00000529355 PAMP19021 973 aa7.04□□□□□ -1.28
CTR9-204ENST00000529355 TACR1P25103 407 aa7.04□□□□□ -1.28
CTR9-204ENST00000529355 NLRX1Q86UT6 975 aa7.04□□□□□ -1.28
CTR9-204ENST00000529355 PPIL6Q8IXY8 311 aa7.04□□□□□ -1.28
CTR9-204ENST00000529355 OXR1Q8N573 874 aa7.04□□□□□ -1.28
CTR9-204ENST00000529355 JMYQ8N9B5 988 aa7.04□□□□□ -1.28
CTR9-204ENST00000529355 SH3TC2Q8TF17 1288 aa7.04□□□□□ -1.28
CTR9-204ENST00000529355 LIN37Q96GY3 246 aaPredicted RBP7.04□□□□□ -1.28
CTR9-204ENST00000529355 CWC22Q9HCG8 908 aaKnown RBP7.04□□□□□ -1.28
CTR9-204ENST00000529355 MRPL42Q9Y6G3 142 aaKnown RBP7.04□□□□□ -1.28
CTR9-204ENST00000529355 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.04□□□□□ -1.28
CTR9-204ENST00000529355 AFMP43652 599 aa7.03□□□□□ -1.28
CTR9-204ENST00000529355 NR0B2Q15466 257 aa7.03□□□□□ -1.28
CTR9-204ENST00000529355 C2orf27AQ580R0 203 aa7.03□□□□□ -1.28
CTR9-204ENST00000529355 LCE4AQ5TA78 99 aa7.03□□□□□ -1.28
CTR9-204ENST00000529355 HLA-DQA1Q5Y7H0 255 aa7.03□□□□□ -1.28
CTR9-204ENST00000529355 USP53Q70EK8 1073 aa7.03□□□□□ -1.28
CTR9-204ENST00000529355 SPPL2CQ8IUH8 684 aa7.03□□□□□ -1.28
CTR9-204ENST00000529355 RCBTB1Q8NDN9 531 aa7.03□□□□□ -1.28
CTR9-204ENST00000529355 NUP43Q8NFH3 380 aa7.03□□□□□ -1.28
CTR9-204ENST00000529355 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.03□□□□□ -1.28
CTR9-204ENST00000529355 RWDD3Q9Y3V2 267 aa7.03□□□□□ -1.28
CTR9-204ENST00000529355 TRAF6Q9Y4K3 522 aa7.03□□□□□ -1.28
CTR9-204ENST00000529355 TRBV23-1A0A0A0MS06 115 aa7.02□□□□□ -1.29
CTR9-204ENST00000529355 A0A1W2PQ45 241 aaPredicted RBP7.02□□□□□ -1.29
CTR9-204ENST00000529355 A0A1W2PQY0 241 aa7.02□□□□□ -1.29
CTR9-204ENST00000529355 ESYT3A0FGR9 886 aa7.02□□□□□ -1.29
CTR9-204ENST00000529355 TBC1D8O95759 1140 aa7.02□□□□□ -1.29
CTR9-204ENST00000529355 C6orf222P0C671 652 aaPredicted RBP7.02□□□□□ -1.29
CTR9-204ENST00000529355 CHRNEQ04844 493 aa7.02□□□□□ -1.29
CTR9-204ENST00000529355 CBX2Q14781 532 aaPredicted RBP7.02□□□□□ -1.29
CTR9-204ENST00000529355 CYP2R1Q6VVX0 501 aa7.02□□□□□ -1.29
CTR9-204ENST00000529355 JAMLQ86YT9 394 aa7.02□□□□□ -1.29
CTR9-204ENST00000529355 THAP3Q8WTV1 239 aaPredicted RBP7.02□□□□□ -1.29
CTR9-204ENST00000529355 KCTD13Q8WZ19 329 aa7.02□□□□□ -1.29
CTR9-204ENST00000529355 FAM168AQ92567 244 aa7.02□□□□□ -1.29
CTR9-204ENST00000529355 KISS1RQ969F8 398 aaPredicted RBP7.02□□□□□ -1.29
CTR9-204ENST00000529355 ASIC4Q96FT7 647 aa7.02□□□□□ -1.29
CTR9-204ENST00000529355 CDC6Q99741 560 aa7.02□□□□□ -1.29
CTR9-204ENST00000529355 RXFP1Q9HBX9 757 aa7.02□□□□□ -1.29
CTR9-204ENST00000529355 BTG4Q9NY30 223 aa7.02□□□□□ -1.29
CTR9-204ENST00000529355 CPP00450 1065 aa7.01□□□□□ -1.29
CTR9-204ENST00000529355 RAC2P15153 192 aa7.01□□□□□ -1.29
CTR9-204ENST00000529355 MAP4K2Q12851 820 aa7.01□□□□□ -1.29
CTR9-204ENST00000529355 ZSWIM9Q86XI8 627 aa7.01□□□□□ -1.29
CTR9-204ENST00000529355 CCDC120Q96HB5 630 aa7.01□□□□□ -1.29
CTR9-204ENST00000529355 MMP19Q99542 508 aa7.01□□□□□ -1.29
CTR9-204ENST00000529355 DHRS4Q9BTZ2 278 aa7.01□□□□□ -1.29
CTR9-204ENST00000529355 PPARGC1AQ9UBK2 798 aaKnown RBP7.01□□□□□ -1.29
CTR9-204ENST00000529355 ACSL6Q9UKU0 697 aa7.01□□□□□ -1.29
CTR9-204ENST00000529355 MRPS23Q9Y3D9 190 aaKnown RBP7.01□□□□□ -1.29
CTR9-204ENST00000529355 WTIPA6NIX2 430 aaPredicted RBP7□□□□□ -1.29
CTR9-204ENST00000529355 PPP1R12AO14974 1030 aaPredicted RBP7□□□□□ -1.29
CTR9-204ENST00000529355 MEFVO15553 781 aaPredicted RBP7□□□□□ -1.29
CTR9-204ENST00000529355 ENDOUP21128 410 aaKnown RBP7□□□□□ -1.29
CTR9-204ENST00000529355 BCL6P41182 706 aa7□□□□□ -1.29
CTR9-204ENST00000529355 KCNMB1Q16558 191 aa7□□□□□ -1.29
CTR9-204ENST00000529355 C21orf62-AS1Q17RA5 79 aa7□□□□□ -1.29
CTR9-204ENST00000529355 TMEM67Q5HYA8 995 aa7□□□□□ -1.29
CTR9-204ENST00000529355 GALNT18Q6P9A2 607 aa7□□□□□ -1.29
CTR9-204ENST00000529355 TEX2Q8IWB9 1127 aa7□□□□□ -1.29
CTR9-204ENST00000529355 SCUBE1Q8IWY4 988 aa7□□□□□ -1.29
CTR9-204ENST00000529355 NLGN1Q8N2Q7 840 aa7□□□□□ -1.29
CTR9-204ENST00000529355 DIO2Q92813 273 aa7□□□□□ -1.29
CTR9-204ENST00000529355 CCDC140Q96MF4 163 aa7□□□□□ -1.29
CTR9-204ENST00000529355 MTA3Q9BTC8 594 aa7□□□□□ -1.29
CTR9-204ENST00000529355 YBX2Q9Y2T7 364 aaKnown RBP7□□□□□ -1.29
CTR9-204ENST00000529355 PCDHA2Q9Y5H9 948 aa7□□□□□ -1.29
CTR9-204ENST00000529355 NPFFR2Q9Y5X5 522 aa7□□□□□ -1.29
CTR9-204ENST00000529355 HCFC2Q9Y5Z7 792 aa7□□□□□ -1.29
CTR9-204ENST00000529355 TAF6LQ9Y6J9 622 aa7□□□□□ -1.29
CTR9-204ENST00000529355 GLI1P08151 1106 aa6.99□□□□□ -1.29
CTR9-204ENST00000529355 FPR2P25090 351 aa6.99□□□□□ -1.29
CTR9-204ENST00000529355 ACBD5Q5T8D3 534 aaPredicted RBP6.99□□□□□ -1.29
CTR9-204ENST00000529355 NLRP10Q86W26 655 aa6.99□□□□□ -1.29
CTR9-204ENST00000529355 LILRA2Q8N149 483 aa6.99□□□□□ -1.29
CTR9-204ENST00000529355 PHF20Q9BVI0 1012 aa6.99□□□□□ -1.29
CTR9-204ENST00000529355 TBX22Q9Y458 520 aa6.99□□□□□ -1.29
CTR9-204ENST00000529355 FUCA1P04066 466 aa6.98□□□□□ -1.29
CTR9-204ENST00000529355 CYP4F8P98187 520 aa6.98□□□□□ -1.29
CTR9-204ENST00000529355 PRR23BQ6ZRT6 265 aa6.98□□□□□ -1.29
CTR9-204ENST00000529355 PLEKHO2Q8TD55 490 aa6.98□□□□□ -1.29
CTR9-204ENST00000529355 CLUHP3Q96NS8 147 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms