RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 IQCA1Q86XH1 822 aa26.26■■□□□ 1.79
TRAPPC4-208ENST00000527680 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.26■■□□□ 1.79
TRAPPC4-208ENST00000527680 MORC4Q8TE76 937 aa26.26■■□□□ 1.79
TRAPPC4-208ENST00000527680 A0A0C4DFX4 3053 aa26.25■■□□□ 1.79
TRAPPC4-208ENST00000527680 HIP1O00291 1037 aa26.25■■□□□ 1.79
TRAPPC4-208ENST00000527680 CD4P01730 458 aa26.25■■□□□ 1.79
TRAPPC4-208ENST00000527680 CCDC178Q5BJE1 867 aa26.25■■□□□ 1.79
TRAPPC4-208ENST00000527680 TMEM240Q5SV17 173 aa26.25■■□□□ 1.79
TRAPPC4-208ENST00000527680 GPATCH4Q5T3I0 446 aaKnown RBP26.25■■□□□ 1.79
TRAPPC4-208ENST00000527680 DGKHQ86XP1 1220 aa26.25■■□□□ 1.79
TRAPPC4-208ENST00000527680 UBA5Q9GZZ9 404 aa26.25■■□□□ 1.79
TRAPPC4-208ENST00000527680 NEDD4P46934 1319 aa26.24■■□□□ 1.79
TRAPPC4-208ENST00000527680 KDM4AO75164 1064 aa26.24■■□□□ 1.79
TRAPPC4-208ENST00000527680 PSMC6P62333 389 aa26.24■■□□□ 1.79
TRAPPC4-208ENST00000527680 PDE4DQ08499 809 aa26.24■■□□□ 1.79
TRAPPC4-208ENST00000527680 DUSP28Q4G0W2 176 aa26.24■■□□□ 1.79
TRAPPC4-208ENST00000527680 SLC30A10Q6XR72 485 aa26.24■■□□□ 1.79
TRAPPC4-208ENST00000527680 ZNF365Q70YC5 407 aa26.24■■□□□ 1.79
TRAPPC4-208ENST00000527680 C16orf59Q7L2K0 433 aa26.24■■□□□ 1.79
TRAPPC4-208ENST00000527680 SLC43A3Q8NBI5 491 aa26.24■■□□□ 1.79
TRAPPC4-208ENST00000527680 MAFAQ8NHW3 353 aaPredicted RBP26.24■■□□□ 1.79
TRAPPC4-208ENST00000527680 CLEC4DQ8WXI8 215 aa26.24■■□□□ 1.79
TRAPPC4-208ENST00000527680 SEZ6LQ9BYH1 1024 aa26.24■■□□□ 1.79
TRAPPC4-208ENST00000527680 HIPK3Q9H422 1215 aa26.24■■□□□ 1.79
TRAPPC4-208ENST00000527680 KAT14Q9H8E8 782 aa26.24■■□□□ 1.79
TRAPPC4-208ENST00000527680 LOC102724159A0A0B4J2E5 919 aa26.23■■□□□ 1.79
TRAPPC4-208ENST00000527680 SNHG28P0DPA3 235 aa26.23■■□□□ 1.79
TRAPPC4-208ENST00000527680 RPS6P62753 249 aaKnown RBP26.23■■□□□ 1.79
TRAPPC4-208ENST00000527680 PWP2Q15269 919 aaKnown RBP26.23■■□□□ 1.79
TRAPPC4-208ENST00000527680 USH1GQ495M9 461 aa26.23■■□□□ 1.79
TRAPPC4-208ENST00000527680 TRPV6Q9H1D0 765 aa26.23■■□□□ 1.79
TRAPPC4-208ENST00000527680 GPHNQ9NQX3 736 aaPredicted RBP26.23■■□□□ 1.79
TRAPPC4-208ENST00000527680 TMEM265A0A087WTH1 108 aa26.22■■□□□ 1.79
TRAPPC4-208ENST00000527680 B4DLN1 442 aa26.22■■□□□ 1.79
TRAPPC4-208ENST00000527680 FOSL2P15408 326 aa26.22■■□□□ 1.79
TRAPPC4-208ENST00000527680 DNAJB2P25686 324 aa26.22■■□□□ 1.79
TRAPPC4-208ENST00000527680 MRPL12P52815 198 aaKnown RBP26.22■■□□□ 1.79
TRAPPC4-208ENST00000527680 PNMA1Q8ND90 353 aa26.22■■□□□ 1.79
TRAPPC4-208ENST00000527680 CPVLQ9H3G5 476 aa26.22■■□□□ 1.79
TRAPPC4-208ENST00000527680 GRIN2DO15399 1336 aa26.21■■□□□ 1.79
TRAPPC4-208ENST00000527680 B4E1Z4 1266 aa26.21■■□□□ 1.79
TRAPPC4-208ENST00000527680 MYL3P08590 195 aa26.21■■□□□ 1.79
TRAPPC4-208ENST00000527680 IMMTQ16891 758 aaKnown RBP26.21■■□□□ 1.79
TRAPPC4-208ENST00000527680 BRDTQ58F21 947 aaPredicted RBP26.21■■□□□ 1.79
TRAPPC4-208ENST00000527680 PSRC1Q6PGN9 363 aaPredicted RBP26.21■■□□□ 1.79
TRAPPC4-208ENST00000527680 OR6J1Q8NGC5 347 aa26.21■■□□□ 1.79
TRAPPC4-208ENST00000527680 IL23AQ9NPF7 189 aa26.21■■□□□ 1.79
TRAPPC4-208ENST00000527680 POLR3EQ9NVU0 708 aa26.21■■□□□ 1.79
TRAPPC4-208ENST00000527680 CTNNA3Q9UI47 895 aa26.21■■□□□ 1.79
TRAPPC4-208ENST00000527680 WDR19Q8NEZ3 1342 aa26.2■■□□□ 1.79
TRAPPC4-208ENST00000527680 LCTP09848 1927 aa26.2■■□□□ 1.79
TRAPPC4-208ENST00000527680 DHX16O60231 1041 aaKnown RBP26.2■■□□□ 1.78
TRAPPC4-208ENST00000527680 FGBP02675 491 aa26.2■■□□□ 1.78
TRAPPC4-208ENST00000527680 NT5C2P49902 561 aa26.2■■□□□ 1.78
TRAPPC4-208ENST00000527680 CPT1AP50416 773 aa26.2■■□□□ 1.78
TRAPPC4-208ENST00000527680 CCL23P55773 120 aa26.2■■□□□ 1.78
TRAPPC4-208ENST00000527680 DNERQ8NFT8 737 aa26.2■■□□□ 1.78
TRAPPC4-208ENST00000527680 TIFAQ96CG3 184 aa26.2■■□□□ 1.78
TRAPPC4-208ENST00000527680 ZSCAN10Q96SZ4 725 aaPredicted RBP26.2■■□□□ 1.78
TRAPPC4-208ENST00000527680 GRXCR1A8MXD5 290 aa26.19■■□□□ 1.78
TRAPPC4-208ENST00000527680 B4GALT4O60513 344 aa26.19■■□□□ 1.78
TRAPPC4-208ENST00000527680 DSCC1Q9BVC3 393 aa26.19■■□□□ 1.78
TRAPPC4-208ENST00000527680 MTIF3Q9H2K0 278 aaKnown RBP26.19■■□□□ 1.78
TRAPPC4-208ENST00000527680 ZNF576Q9H609 170 aa26.19■■□□□ 1.78
TRAPPC4-208ENST00000527680 ZSWIM5Q9P217 1185 aa26.19■■□□□ 1.78
TRAPPC4-208ENST00000527680 RBM47A0AV96 593 aaKnown RBP26.18■■□□□ 1.78
TRAPPC4-208ENST00000527680 LRRC37A2A6NM11 1700 aa26.18■■□□□ 1.78
TRAPPC4-208ENST00000527680 GRIN2CQ14957 1233 aa26.18■■□□□ 1.78
TRAPPC4-208ENST00000527680 PPP2R5BQ15173 497 aa26.18■■□□□ 1.78
TRAPPC4-208ENST00000527680 KRT23Q9C075 422 aa26.18■■□□□ 1.78
TRAPPC4-208ENST00000527680 VAT1LQ9HCJ6 419 aa26.18■■□□□ 1.78
TRAPPC4-208ENST00000527680 UMODL1Q5DID0 1318 aa26.17■■□□□ 1.78
TRAPPC4-208ENST00000527680 RAD50Q92878 1312 aa26.17■■□□□ 1.78
TRAPPC4-208ENST00000527680 NKRFO15226 690 aaKnown RBP eCLIP26.17■■□□□ 1.78
TRAPPC4-208ENST00000527680 CDC37Q16543 378 aaPredicted RBP26.17■■□□□ 1.78
TRAPPC4-208ENST00000527680 ADGRF4Q8IZF3 695 aa26.17■■□□□ 1.78
TRAPPC4-208ENST00000527680 SCFD2Q8WU76 684 aa26.17■■□□□ 1.78
TRAPPC4-208ENST00000527680 MTG1Q9BT17 334 aaPredicted RBP26.17■■□□□ 1.78
TRAPPC4-208ENST00000527680 ALDH8A1Q9H2A2 487 aaPredicted RBP26.17■■□□□ 1.78
TRAPPC4-208ENST00000527680 SUPT20HL2P0C7V6 817 aa26.16■■□□□ 1.78
TRAPPC4-208ENST00000527680 TXNP10599 105 aaKnown RBP26.16■■□□□ 1.78
TRAPPC4-208ENST00000527680 FAM47CQ5HY64 1035 aa26.16■■□□□ 1.78
TRAPPC4-208ENST00000527680 RPUSD2Q8IZ73 545 aaKnown RBP26.16■■□□□ 1.78
TRAPPC4-208ENST00000527680 RGS22Q8NE09 1264 aa26.16■■□□□ 1.78
TRAPPC4-208ENST00000527680 ANKS1AQ92625 1134 aa26.16■■□□□ 1.78
TRAPPC4-208ENST00000527680 UBAC1Q9BSL1 405 aa26.16■■□□□ 1.78
TRAPPC4-208ENST00000527680 NOC4LQ9BVI4 516 aaKnown RBP26.16■■□□□ 1.78
TRAPPC4-208ENST00000527680 PARP1P09874 1014 aaKnown RBP26.15■■□□□ 1.78
TRAPPC4-208ENST00000527680 PBX2P40425 430 aa26.15■■□□□ 1.78
TRAPPC4-208ENST00000527680 PURAQ00577 322 aaKnown RBP26.15■■□□□ 1.78
TRAPPC4-208ENST00000527680 ASPRV1Q53RT3 343 aa26.15■■□□□ 1.78
TRAPPC4-208ENST00000527680 RASIP1Q5U651 963 aa26.15■■□□□ 1.78
TRAPPC4-208ENST00000527680 OTOP2Q7RTS6 562 aa26.15■■□□□ 1.78
TRAPPC4-208ENST00000527680 ENAHQ8N8S7 591 aaPredicted RBP26.15■■□□□ 1.78
TRAPPC4-208ENST00000527680 HERVK_113Q902F9 699 aa26.15■■□□□ 1.78
TRAPPC4-208ENST00000527680 TBC1D5Q92609 795 aa26.15■■□□□ 1.78
TRAPPC4-208ENST00000527680 COL25A1Q9BXS0 654 aaPredicted RBP26.15■■□□□ 1.78
TRAPPC4-208ENST00000527680 PBX4Q9BYU1 374 aa26.15■■□□□ 1.78
TRAPPC4-208ENST00000527680 CNNM2Q9H8M5 875 aa26.15■■□□□ 1.78
TRAPPC4-208ENST00000527680 TRMT13Q9NUP7 481 aaKnown RBP26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms