RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 FBXL16Q8N461 479 aa18.8■□□□□ 0.6
SSSCA1-202ENST00000526433 CCDC82Q8N4S0 544 aa18.8■□□□□ 0.6
SSSCA1-202ENST00000526433 BRF1Q92994 677 aa18.8■□□□□ 0.6
SSSCA1-202ENST00000526433 RRP36Q96EU6 259 aaKnown RBP18.8■□□□□ 0.6
SSSCA1-202ENST00000526433 ABHD16BQ9H3Z7 469 aa18.8■□□□□ 0.6
SSSCA1-202ENST00000526433 NAP1L2Q9ULW6 460 aaPredicted RBP18.8■□□□□ 0.6
SSSCA1-202ENST00000526433 CYP46A1Q9Y6A2 500 aa18.8■□□□□ 0.6
SSSCA1-202ENST00000526433 TNRC18O15417 2968 aaPredicted RBP18.8■□□□□ 0.6
SSSCA1-202ENST00000526433 LCTP09848 1927 aa18.8■□□□□ 0.6
SSSCA1-202ENST00000526433 MNX1P50219 401 aaPredicted RBP18.79■□□□□ 0.6
SSSCA1-202ENST00000526433 RTN1Q16799 776 aa18.79■□□□□ 0.6
SSSCA1-202ENST00000526433 TMTC3Q6ZXV5 915 aa18.79■□□□□ 0.6
SSSCA1-202ENST00000526433 PAWRQ96IZ0 340 aaKnown RBP18.79■□□□□ 0.6
SSSCA1-202ENST00000526433 AGXT2Q9BYV1 514 aa18.79■□□□□ 0.6
SSSCA1-202ENST00000526433 RBM28Q9NW13 759 aaKnown RBP18.79■□□□□ 0.6
SSSCA1-202ENST00000526433 ZHX1Q9UKY1 873 aaPredicted RBP18.79■□□□□ 0.6
SSSCA1-202ENST00000526433 FAM184BQ9ULE4 1060 aa18.79■□□□□ 0.6
SSSCA1-202ENST00000526433 DDX49Q9Y6V7 483 aaKnown RBP18.79■□□□□ 0.6
SSSCA1-202ENST00000526433 GOLGA8AA7E2F4 631 aa18.78■□□□□ 0.6
SSSCA1-202ENST00000526433 GOLGA8BA8MQT2 603 aa18.78■□□□□ 0.6
SSSCA1-202ENST00000526433 CFBP00751 764 aa18.78■□□□□ 0.6
SSSCA1-202ENST00000526433 ALDH5A1P51649 535 aaPredicted RBP18.78■□□□□ 0.6
SSSCA1-202ENST00000526433 SYTL5Q8TDW5 730 aaPredicted RBP18.78■□□□□ 0.6
SSSCA1-202ENST00000526433 MORC4Q8TE76 937 aa18.78■□□□□ 0.6
SSSCA1-202ENST00000526433 DIS3LQ8TF46 1054 aaKnown RBP18.78■□□□□ 0.6
SSSCA1-202ENST00000526433 KATNBL1Q9H079 304 aa18.78■□□□□ 0.6
SSSCA1-202ENST00000526433 LOC102724159A0A0B4J2E5 919 aa18.77■□□□□ 0.6
SSSCA1-202ENST00000526433 OPLAHO14841 1288 aa18.77■□□□□ 0.6
SSSCA1-202ENST00000526433 AKR1A1P14550 325 aa18.77■□□□□ 0.6
SSSCA1-202ENST00000526433 RCAN1P53805 252 aa18.77■□□□□ 0.6
SSSCA1-202ENST00000526433 PWP2Q15269 919 aaKnown RBP18.77■□□□□ 0.6
SSSCA1-202ENST00000526433 CCDC144BQ3MJ40 725 aa18.77■□□□□ 0.6
SSSCA1-202ENST00000526433 NECAB2Q7Z6G3 386 aa18.77■□□□□ 0.6
SSSCA1-202ENST00000526433 ARRDC4Q8NCT1 418 aa18.77■□□□□ 0.6
SSSCA1-202ENST00000526433 DNERQ8NFT8 737 aa18.77■□□□□ 0.6
SSSCA1-202ENST00000526433 TAAR1Q96RJ0 339 aa18.77■□□□□ 0.6
SSSCA1-202ENST00000526433 UPF3BQ9BZI7 483 aaKnown RBP18.77■□□□□ 0.6
SSSCA1-202ENST00000526433 FAM217BQ9NTX9 383 aaPredicted RBP18.77■□□□□ 0.6
SSSCA1-202ENST00000526433 SEC63Q9UGP8 760 aaKnown RBP18.77■□□□□ 0.6
SSSCA1-202ENST00000526433 MKI67P46013 3256 aaKnown RBP18.76■□□□□ 0.59
SSSCA1-202ENST00000526433 hCG_1642624A0A1W2PR95 340 aa18.76■□□□□ 0.59
SSSCA1-202ENST00000526433 RARBP10826 455 aa18.76■□□□□ 0.59
SSSCA1-202ENST00000526433 CDC27P30260 824 aa18.76■□□□□ 0.59
SSSCA1-202ENST00000526433 ANAPC15P60006 121 aa18.76■□□□□ 0.59
SSSCA1-202ENST00000526433 PPP2R5BQ15173 497 aa18.76■□□□□ 0.59
SSSCA1-202ENST00000526433 EEPD1Q7L9B9 569 aa18.76■□□□□ 0.59
SSSCA1-202ENST00000526433 SAMD3Q8N6K7 520 aa18.76■□□□□ 0.59
SSSCA1-202ENST00000526433 MAP3K20Q9NYL2 800 aaKnown RBP18.76■□□□□ 0.59
SSSCA1-202ENST00000526433 COL20A1Q9P218 1284 aa18.76■□□□□ 0.59
SSSCA1-202ENST00000526433 FRMPD3Q5JV73 1810 aa18.76■□□□□ 0.59
SSSCA1-202ENST00000526433 B4DLN1 442 aa18.75■□□□□ 0.59
SSSCA1-202ENST00000526433 ADD1P35611 737 aaKnown RBP18.75■□□□□ 0.59
SSSCA1-202ENST00000526433 METAP2P50579 478 aaKnown RBP eCLIP18.75■□□□□ 0.59
SSSCA1-202ENST00000526433 HSD17B4P51659 736 aa18.75■□□□□ 0.59
SSSCA1-202ENST00000526433 MRPL12P52815 198 aaKnown RBP18.75■□□□□ 0.59
SSSCA1-202ENST00000526433 EVCP57679 992 aa18.75■□□□□ 0.59
SSSCA1-202ENST00000526433 GHRHRQ02643 423 aa18.75■□□□□ 0.59
SSSCA1-202ENST00000526433 TOB2Q14106 344 aaPredicted RBP18.75■□□□□ 0.59
SSSCA1-202ENST00000526433 C8orf34Q49A92 452 aa18.75■□□□□ 0.59
SSSCA1-202ENST00000526433 GJC2Q5T442 439 aaPredicted RBP18.75■□□□□ 0.59
SSSCA1-202ENST00000526433 MPHOSPH6Q99547 160 aaKnown RBP18.75■□□□□ 0.59
SSSCA1-202ENST00000526433 PDRG1Q9NUG6 133 aa18.75■□□□□ 0.59
SSSCA1-202ENST00000526433 CCDC196A0A1B0GTZ2 297 aa18.74■□□□□ 0.59
SSSCA1-202ENST00000526433 GCOM1H8Y6P7 765 aaPredicted RBP18.74■□□□□ 0.59
SSSCA1-202ENST00000526433 MYCNP04198 464 aaPredicted RBP18.74■□□□□ 0.59
SSSCA1-202ENST00000526433 POLR2MP0CAP2 368 aa18.74■□□□□ 0.59
SSSCA1-202ENST00000526433 PDE4DQ08499 809 aa18.74■□□□□ 0.59
SSSCA1-202ENST00000526433 FUT2Q10981 343 aa18.74■□□□□ 0.59
SSSCA1-202ENST00000526433 TAPT1Q6NXT6 567 aa18.74■□□□□ 0.59
SSSCA1-202ENST00000526433 NSUN6Q8TEA1 469 aaKnown RBP18.74■□□□□ 0.59
SSSCA1-202ENST00000526433 LENG1Q96BZ8 264 aaPredicted RBP18.74■□□□□ 0.59
SSSCA1-202ENST00000526433 RMDN3Q96TC7 470 aa18.74■□□□□ 0.59
SSSCA1-202ENST00000526433 C11orf49Q9H6J7 331 aa18.74■□□□□ 0.59
SSSCA1-202ENST00000526433 VTA1Q9NP79 307 aa18.74■□□□□ 0.59
SSSCA1-202ENST00000526433 XPNPEP3Q9NQH7 507 aa18.74■□□□□ 0.59
SSSCA1-202ENST00000526433 PDGFCQ9NRA1 345 aa18.74■□□□□ 0.59
SSSCA1-202ENST00000526433 V9GY48 417 aaPredicted RBP18.74■□□□□ 0.59
SSSCA1-202ENST00000526433 DUSP11O75319 330 aaKnown RBP18.73■□□□□ 0.59
SSSCA1-202ENST00000526433 PGK1P00558 417 aa18.73■□□□□ 0.59
SSSCA1-202ENST00000526433 EDNRBP24530 442 aa18.73■□□□□ 0.59
SSSCA1-202ENST00000526433 PDIA3P30101 505 aaKnown RBP18.73■□□□□ 0.59
SSSCA1-202ENST00000526433 HOXA13P31271 388 aaPredicted RBP18.73■□□□□ 0.59
SSSCA1-202ENST00000526433 ADCYAP1R1P41586 468 aa18.73■□□□□ 0.59
SSSCA1-202ENST00000526433 TNFAIP2Q03169 654 aa18.73■□□□□ 0.59
SSSCA1-202ENST00000526433 LRRC41Q15345 812 aa18.73■□□□□ 0.59
SSSCA1-202ENST00000526433 IQSEC1Q6DN90 963 aa18.73■□□□□ 0.59
SSSCA1-202ENST00000526433 FBXO16Q8IX29 292 aaPredicted RBP18.73■□□□□ 0.59
SSSCA1-202ENST00000526433 LARP6Q9BRS8 491 aaKnown RBP18.73■□□□□ 0.59
SSSCA1-202ENST00000526433 HTATIP2Q9BUP3 242 aa18.73■□□□□ 0.59
SSSCA1-202ENST00000526433 CNTNAP5Q8WYK1 1306 aa18.73■□□□□ 0.59
SSSCA1-202ENST00000526433 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.72■□□□□ 0.59
SSSCA1-202ENST00000526433 DNM1LO00429 736 aa18.72■□□□□ 0.59
SSSCA1-202ENST00000526433 ADCY6O43306 1168 aa18.72■□□□□ 0.59
SSSCA1-202ENST00000526433 COL6A1P12109 1028 aa18.72■□□□□ 0.59
SSSCA1-202ENST00000526433 ARHGEF16Q5VV41 709 aa18.72■□□□□ 0.59
SSSCA1-202ENST00000526433 NOL8Q76FK4 1167 aaKnown RBP18.72■□□□□ 0.59
SSSCA1-202ENST00000526433 DPF3Q92784 378 aa18.72■□□□□ 0.59
SSSCA1-202ENST00000526433 IL17RAQ96F46 866 aa18.72■□□□□ 0.59
SSSCA1-202ENST00000526433 IWS1Q96ST2 819 aa18.72■□□□□ 0.59
SSSCA1-202ENST00000526433 EIF2AK2P19525 551 aaKnown RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms