RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 AATKQ6ZMQ8 1374 aa6.99□□□□□ -1.29
SVIP-202ENST00000525670 RBAK-RBAKDNI3L0D1 243 aa6.99□□□□□ -1.29
SVIP-202ENST00000525670 SORBS3O60504 671 aa6.99□□□□□ -1.29
SVIP-202ENST00000525670 BPNT1O95861 308 aa6.99□□□□□ -1.29
SVIP-202ENST00000525670 ESR1P03372 595 aa6.99□□□□□ -1.29
SVIP-202ENST00000525670 PLCG1P19174 1290 aa6.99□□□□□ -1.29
SVIP-202ENST00000525670 YARSP54577 528 aaKnown RBP6.99□□□□□ -1.29
SVIP-202ENST00000525670 TMEM201Q5SNT2 666 aa6.99□□□□□ -1.29
SVIP-202ENST00000525670 PPP1R13LQ8WUF5 828 aa6.99□□□□□ -1.29
SVIP-202ENST00000525670 GATAD2BQ8WXI9 593 aa6.99□□□□□ -1.29
SVIP-202ENST00000525670 Q96M66 194 aa6.99□□□□□ -1.29
SVIP-202ENST00000525670 PUS7Q96PZ0 661 aaKnown RBP6.99□□□□□ -1.29
SVIP-202ENST00000525670 DUSP15Q9H1R2 295 aaPredicted RBP6.99□□□□□ -1.29
SVIP-202ENST00000525670 CRB1P82279 1406 aa6.99□□□□□ -1.29
SVIP-202ENST00000525670 SPATA31A1Q5TZJ5 1347 aa6.99□□□□□ -1.29
SVIP-202ENST00000525670 FAM208AQ9UK61 1670 aaKnown RBP6.98□□□□□ -1.29
SVIP-202ENST00000525670 UPK3BL1B0FP48 263 aa6.98□□□□□ -1.29
SVIP-202ENST00000525670 UPK3BL2E5RIL1 263 aa6.98□□□□□ -1.29
SVIP-202ENST00000525670 PF4P02776 101 aa6.98□□□□□ -1.29
SVIP-202ENST00000525670 HOXC9P31274 260 aa6.98□□□□□ -1.29
SVIP-202ENST00000525670 MPZL3Q6UWV2 235 aa6.98□□□□□ -1.29
SVIP-202ENST00000525670 TTC6Q86TZ1 520 aa6.98□□□□□ -1.29
SVIP-202ENST00000525670 RELL1Q8IUW5 271 aa6.98□□□□□ -1.29
SVIP-202ENST00000525670 FAM13CQ8NE31 585 aa6.98□□□□□ -1.29
SVIP-202ENST00000525670 CYB5D2Q8WUJ1 264 aa6.98□□□□□ -1.29
SVIP-202ENST00000525670 RSRP1Q9BUV0 290 aa6.98□□□□□ -1.29
SVIP-202ENST00000525670 TRIT1Q9H3H1 467 aaKnown RBP6.98□□□□□ -1.29
SVIP-202ENST00000525670 SLAMF8Q9P0V8 285 aa6.98□□□□□ -1.29
SVIP-202ENST00000525670 KNSTRNQ9Y448 316 aa6.98□□□□□ -1.29
SVIP-202ENST00000525670 PARP4Q9UKK3 1724 aaKnown RBP6.98□□□□□ -1.29
SVIP-202ENST00000525670 WDR17Q8IZU2 1322 aa6.98□□□□□ -1.29
SVIP-202ENST00000525670 CDK12Q9NYV4 1490 aaPredicted RBP6.98□□□□□ -1.29
SVIP-202ENST00000525670 F13A1P00488 732 aa6.97□□□□□ -1.29
SVIP-202ENST00000525670 ERCC3P19447 782 aa6.97□□□□□ -1.29
SVIP-202ENST00000525670 PWP1Q13610 501 aa6.97□□□□□ -1.29
SVIP-202ENST00000525670 HSP90AB2PQ58FF8 381 aa6.97□□□□□ -1.29
SVIP-202ENST00000525670 SMG6Q86US8 1419 aaKnown RBP6.97□□□□□ -1.29
SVIP-202ENST00000525670 MORC1Q86VD1 984 aa6.97□□□□□ -1.29
SVIP-202ENST00000525670 TMEM74Q96NL1 305 aa6.97□□□□□ -1.29
SVIP-202ENST00000525670 GPR62Q9BZJ7 368 aa6.97□□□□□ -1.29
SVIP-202ENST00000525670 MRS2Q9HD23 443 aa6.97□□□□□ -1.29
SVIP-202ENST00000525670 KCNH3Q9ULD8 1083 aa6.97□□□□□ -1.29
SVIP-202ENST00000525670 MEGF6O75095 1541 aa6.96□□□□□ -1.29
SVIP-202ENST00000525670 ABCC6O95255 1503 aa6.96□□□□□ -1.29
SVIP-202ENST00000525670 DNAJC25-GNG10A0A024R161 153 aa6.96□□□□□ -1.3
SVIP-202ENST00000525670 WASH4PA8MWX3 477 aa6.96□□□□□ -1.3
SVIP-202ENST00000525670 F6X3S4 739 aa6.96□□□□□ -1.3
SVIP-202ENST00000525670 SRFP11831 508 aa6.96□□□□□ -1.3
SVIP-202ENST00000525670 RAC2P15153 192 aa6.96□□□□□ -1.3
SVIP-202ENST00000525670 TPP2P29144 1249 aaPredicted RBP6.96□□□□□ -1.3
SVIP-202ENST00000525670 GBP2P32456 591 aaPredicted RBP6.96□□□□□ -1.3
SVIP-202ENST00000525670 GAB4Q2WGN9 574 aa6.96□□□□□ -1.3
SVIP-202ENST00000525670 RALGPS1Q5JS13 557 aa6.96□□□□□ -1.3
SVIP-202ENST00000525670 PRR23BQ6ZRT6 265 aa6.96□□□□□ -1.3
SVIP-202ENST00000525670 KRT27Q7Z3Y8 459 aa6.96□□□□□ -1.3
SVIP-202ENST00000525670 CREG2Q8IUH2 290 aa6.96□□□□□ -1.3
SVIP-202ENST00000525670 SLFN12Q8IYM2 578 aa6.96□□□□□ -1.3
SVIP-202ENST00000525670 TCP11L2Q8N4U5 519 aa6.96□□□□□ -1.3
SVIP-202ENST00000525670 RHOVQ96L33 236 aa6.96□□□□□ -1.3
SVIP-202ENST00000525670 GPATCH2Q9NW75 528 aa6.96□□□□□ -1.3
SVIP-202ENST00000525670 TMEM59LQ9UK28 342 aa6.96□□□□□ -1.3
SVIP-202ENST00000525670 KAT6BQ8WYB5 2073 aa6.96□□□□□ -1.3
SVIP-202ENST00000525670 SHANK3Q9BYB0 1731 aa6.96□□□□□ -1.3
SVIP-202ENST00000525670 TNS1Q9HBL0 1735 aaKnown RBP6.96□□□□□ -1.3
SVIP-202ENST00000525670 RTL1A6NKG5 1358 aa6.95□□□□□ -1.3
SVIP-202ENST00000525670 FLT4P35916 1363 aa6.95□□□□□ -1.3
SVIP-202ENST00000525670 BLMP54132 1417 aaPredicted RBP6.95□□□□□ -1.3
SVIP-202ENST00000525670 TAGLNQ01995 201 aaKnown RBP6.95□□□□□ -1.3
SVIP-202ENST00000525670 DDX10Q13206 875 aaKnown RBP6.95□□□□□ -1.3
SVIP-202ENST00000525670 DTWD2Q8NBA8 298 aa6.95□□□□□ -1.3
SVIP-202ENST00000525670 ABHD4Q8TB40 342 aa6.95□□□□□ -1.3
SVIP-202ENST00000525670 IP6K1Q92551 441 aa6.95□□□□□ -1.3
SVIP-202ENST00000525670 PPP1R16BQ96T49 567 aa6.95□□□□□ -1.3
SVIP-202ENST00000525670 ADAMTS10Q9H324 1103 aa6.95□□□□□ -1.3
SVIP-202ENST00000525670 VTI1BQ9UEU0 232 aa6.95□□□□□ -1.3
SVIP-202ENST00000525670 DOT1LQ8TEK3 1739 aa6.95□□□□□ -1.3
SVIP-202ENST00000525670 TNS2Q63HR2 1409 aa6.94□□□□□ -1.3
SVIP-202ENST00000525670 ZEB1P37275 1124 aaPredicted RBP6.94□□□□□ -1.3
SVIP-202ENST00000525670 RAP1GAPP47736 663 aa6.94□□□□□ -1.3
SVIP-202ENST00000525670 TSPYL5Q86VY4 417 aaPredicted RBP6.94□□□□□ -1.3
SVIP-202ENST00000525670 RNF141Q8WVD5 230 aa6.94□□□□□ -1.3
SVIP-202ENST00000525670 REV1Q9UBZ9 1251 aa6.94□□□□□ -1.3
SVIP-202ENST00000525670 NSD2O96028 1365 aa6.94□□□□□ -1.3
SVIP-202ENST00000525670 DISP2A7MBM2 1401 aa6.93□□□□□ -1.3
SVIP-202ENST00000525670 RGPD1P0DJD0 1748 aa6.93□□□□□ -1.3
SVIP-202ENST00000525670 CHURC1-FNTBB4DL54 471 aa6.93□□□□□ -1.3
SVIP-202ENST00000525670 HTR3BO95264 441 aa6.93□□□□□ -1.3
SVIP-202ENST00000525670 TSPAN15O95858 294 aa6.93□□□□□ -1.3
SVIP-202ENST00000525670 HPXP02790 462 aa6.93□□□□□ -1.3
SVIP-202ENST00000525670 HK2P52789 917 aa6.93□□□□□ -1.3
SVIP-202ENST00000525670 DDB1Q16531 1140 aa6.93□□□□□ -1.3
SVIP-202ENST00000525670 NBPF6Q5VWK0 638 aa6.93□□□□□ -1.3
SVIP-202ENST00000525670 SYDE1Q6ZW31 735 aaPredicted RBP6.93□□□□□ -1.3
SVIP-202ENST00000525670 DEFB132Q7Z7B7 95 aa6.93□□□□□ -1.3
SVIP-202ENST00000525670 MYLIPQ8WY64 445 aa6.93□□□□□ -1.3
SVIP-202ENST00000525670 CCDC74BQ96LY2 380 aa6.93□□□□□ -1.3
SVIP-202ENST00000525670 NBPF4Q96M43 638 aa6.93□□□□□ -1.3
SVIP-202ENST00000525670 POLKQ9UBT6 870 aa6.93□□□□□ -1.3
SVIP-202ENST00000525670 DUSP13Q9UII6 198 aa6.93□□□□□ -1.3
SVIP-202ENST00000525670 POLR3KQ9Y2Y1 108 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms