RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 KIAA1524Q8TCG1 905 aa17.23■□□□□ 0.35
BEST1-204ENST00000524926 PRR12Q9ULL5 1215 aa17.23■□□□□ 0.35
BEST1-204ENST00000524926 PLCG1P19174 1290 aa17.22■□□□□ 0.35
BEST1-204ENST00000524926 RPS12P25398 132 aaKnown RBP17.22■□□□□ 0.35
BEST1-204ENST00000524926 STX17P56962 302 aa17.22■□□□□ 0.35
BEST1-204ENST00000524926 ARID5BQ14865 1188 aa17.22■□□□□ 0.35
BEST1-204ENST00000524926 CT47A1Q5JQC4 288 aaPredicted RBP17.22■□□□□ 0.35
BEST1-204ENST00000524926 FAM83BQ5T0W9 1011 aa17.22■□□□□ 0.35
BEST1-204ENST00000524926 TMC6Q7Z403 805 aa17.22■□□□□ 0.35
BEST1-204ENST00000524926 IGSF22Q8N9C0 903 aa17.22■□□□□ 0.35
BEST1-204ENST00000524926 MED15Q96RN5 788 aa17.22■□□□□ 0.35
BEST1-204ENST00000524926 RMND1Q9NWS8 449 aa17.22■□□□□ 0.35
BEST1-204ENST00000524926 LRWD1Q9UFC0 647 aa17.22■□□□□ 0.35
BEST1-204ENST00000524926 PGAP2Q9UHJ9 254 aa17.22■□□□□ 0.35
BEST1-204ENST00000524926 CBFA2T2O43439 604 aa17.22■□□□□ 0.35
BEST1-204ENST00000524926 OFD1O75665 1012 aa17.22■□□□□ 0.35
BEST1-204ENST00000524926 GMPSP49915 693 aaPredicted RBP17.22■□□□□ 0.35
BEST1-204ENST00000524926 ZNF280AP59817 542 aaPredicted RBP17.22■□□□□ 0.35
BEST1-204ENST00000524926 SAMD7Q7Z3H4 446 aa17.22■□□□□ 0.35
BEST1-204ENST00000524926 LRRC8AQ8IWT6 810 aa17.22■□□□□ 0.35
BEST1-204ENST00000524926 MICALL2Q8IY33 904 aa17.22■□□□□ 0.35
BEST1-204ENST00000524926 DPF2Q92785 391 aa17.22■□□□□ 0.35
BEST1-204ENST00000524926 CALML4Q96GE6 196 aa17.22■□□□□ 0.35
BEST1-204ENST00000524926 RAB34Q9BZG1 259 aa17.22■□□□□ 0.35
BEST1-204ENST00000524926 MEIS2O14770 477 aa17.21■□□□□ 0.35
BEST1-204ENST00000524926 ANO3Q9BYT9 981 aa17.21■□□□□ 0.35
BEST1-204ENST00000524926 SAMSN1Q9NSI8 373 aaKnown RBP17.21■□□□□ 0.35
BEST1-204ENST00000524926 PPP1R3GB7ZBB8 358 aa17.21■□□□□ 0.35
BEST1-204ENST00000524926 MMP14P50281 582 aa17.21■□□□□ 0.35
BEST1-204ENST00000524926 FXR2P51116 673 aaKnown RBP eCLIP17.21■□□□□ 0.35
BEST1-204ENST00000524926 TNFAIP1Q13829 316 aa17.21■□□□□ 0.35
BEST1-204ENST00000524926 SAMD1Q6SPF0 538 aaPredicted RBP17.21■□□□□ 0.35
BEST1-204ENST00000524926 CUEDC2Q9H467 287 aa17.21■□□□□ 0.35
BEST1-204ENST00000524926 KBTBD4Q9NVX7 518 aa17.21■□□□□ 0.35
BEST1-204ENST00000524926 IMPACTQ9P2X3 320 aa17.21■□□□□ 0.35
BEST1-204ENST00000524926 CNOT7Q9UIV1 285 aaKnown RBP17.21■□□□□ 0.35
BEST1-204ENST00000524926 ASNSP08243 561 aa17.2■□□□□ 0.34
BEST1-204ENST00000524926 GCFC2P16383 781 aaKnown RBP17.2■□□□□ 0.34
BEST1-204ENST00000524926 TAL1P17542 331 aaPredicted RBP17.2■□□□□ 0.34
BEST1-204ENST00000524926 TBC1D10BQ4KMP7 808 aaPredicted RBP17.2■□□□□ 0.34
BEST1-204ENST00000524926 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.2■□□□□ 0.34
BEST1-204ENST00000524926 CCDC84Q86UT8 332 aaPredicted RBP17.2■□□□□ 0.34
BEST1-204ENST00000524926 LRRC15Q8TF66 581 aa17.2■□□□□ 0.34
BEST1-204ENST00000524926 NAP1L5Q96NT1 182 aaPredicted RBP17.2■□□□□ 0.34
BEST1-204ENST00000524926 MMTAG2Q9BU76 263 aaKnown RBP17.2■□□□□ 0.34
BEST1-204ENST00000524926 SH2D4AQ9H788 454 aa17.2■□□□□ 0.34
BEST1-204ENST00000524926 VCPKMTQ9H867 229 aa17.2■□□□□ 0.34
BEST1-204ENST00000524926 MYH7BA7E2Y1 1941 aa17.2■□□□□ 0.34
BEST1-204ENST00000524926 SYNRGQ9UMZ2 1314 aa17.2■□□□□ 0.34
BEST1-204ENST00000524926 POTEMA6NI47 508 aa17.2■□□□□ 0.34
BEST1-204ENST00000524926 PTGER2P43116 358 aa17.2■□□□□ 0.34
BEST1-204ENST00000524926 GSDMDP57764 484 aa17.2■□□□□ 0.34
BEST1-204ENST00000524926 DNTTIP2Q5QJE6 756 aaKnown RBP17.2■□□□□ 0.34
BEST1-204ENST00000524926 ZNF658Q5TYW1 1059 aaPredicted RBP17.2■□□□□ 0.34
BEST1-204ENST00000524926 SPATA1Q5VX52 437 aa17.2■□□□□ 0.34
BEST1-204ENST00000524926 NLGN2Q8NFZ4 835 aa17.2■□□□□ 0.34
BEST1-204ENST00000524926 KIFC2Q96AC6 838 aa17.2■□□□□ 0.34
BEST1-204ENST00000524926 NAP1L4Q99733 375 aaKnown RBP17.2■□□□□ 0.34
BEST1-204ENST00000524926 GLIS2Q9BZE0 524 aaPredicted RBP17.2■□□□□ 0.34
BEST1-204ENST00000524926 MYL1P05976 194 aa17.19■□□□□ 0.34
BEST1-204ENST00000524926 ZNF18P17022 549 aa17.19■□□□□ 0.34
BEST1-204ENST00000524926 PRELPP51888 382 aa17.19■□□□□ 0.34
BEST1-204ENST00000524926 MAP3K10Q02779 954 aa17.19■□□□□ 0.34
BEST1-204ENST00000524926 AP3B2Q13367 1082 aa17.19■□□□□ 0.34
BEST1-204ENST00000524926 PDIA5Q14554 519 aa17.19■□□□□ 0.34
BEST1-204ENST00000524926 DHX8Q14562 1220 aaKnown RBP17.19■□□□□ 0.34
BEST1-204ENST00000524926 GJA10Q969M2 543 aa17.19■□□□□ 0.34
BEST1-204ENST00000524926 CDK5RAP3Q96JB5 506 aa17.19■□□□□ 0.34
BEST1-204ENST00000524926 MAGEF1Q9HAY2 307 aa17.19■□□□□ 0.34
BEST1-204ENST00000524926 CTNND2Q9UQB3 1225 aa17.19■□□□□ 0.34
BEST1-204ENST00000524926 LTBP3Q9NS15 1303 aa17.19■□□□□ 0.34
BEST1-204ENST00000524926 SPDYE3A6NKU9 549 aa17.19■□□□□ 0.34
BEST1-204ENST00000524926 FZD9O00144 591 aa17.19■□□□□ 0.34
BEST1-204ENST00000524926 USP11P51784 963 aa17.19■□□□□ 0.34
BEST1-204ENST00000524926 CHURC1Q8WUH1 139 aa17.19■□□□□ 0.34
BEST1-204ENST00000524926 HAS1Q92839 578 aa17.19■□□□□ 0.34
BEST1-204ENST00000524926 UIMC1Q96RL1 719 aa17.19■□□□□ 0.34
BEST1-204ENST00000524926 MAPK8IP1Q9UQF2 711 aa17.19■□□□□ 0.34
BEST1-204ENST00000524926 GDAQ9Y2T3 454 aa17.19■□□□□ 0.34
BEST1-204ENST00000524926 TPD52L1Q16890 204 aaPredicted RBP17.18■□□□□ 0.34
BEST1-204ENST00000524926 KRT79Q5XKE5 535 aa17.18■□□□□ 0.34
BEST1-204ENST00000524926 CCDC174Q6PII3 467 aa17.18■□□□□ 0.34
BEST1-204ENST00000524926 FEZ1Q99689 392 aa17.18■□□□□ 0.34
BEST1-204ENST00000524926 PCDHA12Q9UN75 941 aa17.18■□□□□ 0.34
BEST1-204ENST00000524926 ASTN2O75129 1339 aaPredicted RBP17.18■□□□□ 0.34
BEST1-204ENST00000524926 COBLO75128 1261 aa17.18■□□□□ 0.34
BEST1-204ENST00000524926 KMT5BQ4FZB7 885 aa17.18■□□□□ 0.34
BEST1-204ENST00000524926 SNX29Q8TEQ0 813 aa17.18■□□□□ 0.34
BEST1-204ENST00000524926 TEPSINQ96N21 525 aa17.18■□□□□ 0.34
BEST1-204ENST00000524926 HACL1Q9UJ83 578 aa17.18■□□□□ 0.34
BEST1-204ENST00000524926 PHF20L1A8MW92 1017 aa17.17■□□□□ 0.34
BEST1-204ENST00000524926 HOXA13P31271 388 aaPredicted RBP17.17■□□□□ 0.34
BEST1-204ENST00000524926 AMPD3Q01432 767 aa17.17■□□□□ 0.34
BEST1-204ENST00000524926 PTPN21Q16825 1174 aa17.17■□□□□ 0.34
BEST1-204ENST00000524926 MCTP2Q6DN12 878 aa17.17■□□□□ 0.34
BEST1-204ENST00000524926 P2RX7Q99572 595 aaKnown RBP17.17■□□□□ 0.34
BEST1-204ENST00000524926 ZNF341Q9BYN7 854 aa17.17■□□□□ 0.34
BEST1-204ENST00000524926 SPTLC3Q9NUV7 552 aa17.17■□□□□ 0.34
BEST1-204ENST00000524926 FOSP01100 380 aaPredicted RBP17.17■□□□□ 0.34
BEST1-204ENST00000524926 SKILP12757 684 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms