RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 MKNK2Q9HBH9 465 aa8.14□□□□□ -1.11
VPS11-201ENST00000524454 FAM217BQ9NTX9 383 aaPredicted RBP8.14□□□□□ -1.11
VPS11-201ENST00000524454 SRRDQ9UH36 339 aa8.14□□□□□ -1.11
VPS11-201ENST00000524454 CNPY2Q9Y2B0 182 aa8.14□□□□□ -1.11
VPS11-201ENST00000524454 HTTP42858 3142 aa8.14□□□□□ -1.11
VPS11-201ENST00000524454 GOLGA6L4A6NEF3 574 aa8.13□□□□□ -1.11
VPS11-201ENST00000524454 USP17L15C9J2P7 530 aa8.13□□□□□ -1.11
VPS11-201ENST00000524454 USP17L13C9JLJ4 530 aa8.13□□□□□ -1.11
VPS11-201ENST00000524454 USP17L11C9JVI0 530 aa8.13□□□□□ -1.11
VPS11-201ENST00000524454 USP17L18D6R9N7 530 aa8.13□□□□□ -1.11
VPS11-201ENST00000524454 USP17L22D6RA61 530 aa8.13□□□□□ -1.11
VPS11-201ENST00000524454 USP17L17D6RBQ6 530 aa8.13□□□□□ -1.11
VPS11-201ENST00000524454 USP17L19D6RCP7 530 aa8.13□□□□□ -1.11
VPS11-201ENST00000524454 USP17L20D6RJB6 530 aa8.13□□□□□ -1.11
VPS11-201ENST00000524454 CTAGE5O15320 804 aa8.13□□□□□ -1.11
VPS11-201ENST00000524454 FIBPO43427 364 aa8.13□□□□□ -1.11
VPS11-201ENST00000524454 CNMDO75829 334 aa8.13□□□□□ -1.11
VPS11-201ENST00000524454 ELNP15502 786 aa8.13□□□□□ -1.11
VPS11-201ENST00000524454 ADD1P35611 737 aaKnown RBP8.13□□□□□ -1.11
VPS11-201ENST00000524454 FLT3LGP49771 235 aa8.13□□□□□ -1.11
VPS11-201ENST00000524454 USP14P54578 494 aa8.13□□□□□ -1.11
VPS11-201ENST00000524454 USP17L24Q0WX57 530 aa8.13□□□□□ -1.11
VPS11-201ENST00000524454 SAFBQ15424 915 aaKnown RBP eCLIP8.13□□□□□ -1.11
VPS11-201ENST00000524454 FAM110CQ1W6H9 321 aa8.13□□□□□ -1.11
VPS11-201ENST00000524454 PROX2Q3B8N5 592 aa8.13□□□□□ -1.11
VPS11-201ENST00000524454 CATSPERGQ6ZRH7 1159 aa8.13□□□□□ -1.11
VPS11-201ENST00000524454 RBM43Q6ZSC3 357 aaKnown RBP8.13□□□□□ -1.11
VPS11-201ENST00000524454 NBPF11Q86T75 865 aa8.13□□□□□ -1.11
VPS11-201ENST00000524454 NKX2-3Q8TAU0 364 aa8.13□□□□□ -1.11
VPS11-201ENST00000524454 RAET1EQ8TD07 263 aa8.13□□□□□ -1.11
VPS11-201ENST00000524454 DDX11Q96FC9 970 aa8.13□□□□□ -1.11
VPS11-201ENST00000524454 CCDC17Q96LX7 622 aa8.13□□□□□ -1.11
VPS11-201ENST00000524454 ALG1Q9BT22 464 aa8.13□□□□□ -1.11
VPS11-201ENST00000524454 PORCNQ9H237 461 aa8.13□□□□□ -1.11
VPS11-201ENST00000524454 FOXP1Q9H334 677 aaPredicted RBP8.13□□□□□ -1.11
VPS11-201ENST00000524454 ARHGEF10LQ9HCE6 1279 aa8.13□□□□□ -1.11
VPS11-201ENST00000524454 TOMM22Q9NS69 142 aa8.13□□□□□ -1.11
VPS11-201ENST00000524454 TMEM63CQ9P1W3 806 aa8.13□□□□□ -1.11
VPS11-201ENST00000524454 BTBD7Q9P203 1132 aa8.13□□□□□ -1.11
VPS11-201ENST00000524454 RBPJLQ9UBG7 517 aa8.13□□□□□ -1.11
VPS11-201ENST00000524454 NAP1L2Q9ULW6 460 aaPredicted RBP8.13□□□□□ -1.11
VPS11-201ENST00000524454 SYNPO2Q9UMS6 1093 aa8.13□□□□□ -1.11
VPS11-201ENST00000524454 TSPY2A6NKD2 308 aa8.12□□□□□ -1.11
VPS11-201ENST00000524454 hCG_1984214I3L0E3 225 aa8.12□□□□□ -1.11
VPS11-201ENST00000524454 PRPF3O43395 683 aaKnown RBP8.12□□□□□ -1.11
VPS11-201ENST00000524454 RANBP6O60518 1105 aaKnown RBP8.12□□□□□ -1.11
VPS11-201ENST00000524454 NMT2O60551 498 aa8.12□□□□□ -1.11
VPS11-201ENST00000524454 BMP15O95972 392 aa8.12□□□□□ -1.11
VPS11-201ENST00000524454 CDC27P30260 824 aa8.12□□□□□ -1.11
VPS11-201ENST00000524454 GCLCP48506 637 aaPredicted RBP8.12□□□□□ -1.11
VPS11-201ENST00000524454 ERVK-9P63128 1117 aa8.12□□□□□ -1.11
VPS11-201ENST00000524454 ERVK-24P63145 666 aa8.12□□□□□ -1.11
VPS11-201ENST00000524454 FUT2Q10981 343 aa8.12□□□□□ -1.11
VPS11-201ENST00000524454 TRIM32Q13049 653 aa8.12□□□□□ -1.11
VPS11-201ENST00000524454 ARHGEF6Q15052 776 aa8.12□□□□□ -1.11
VPS11-201ENST00000524454 MTFR1Q15390 333 aa8.12□□□□□ -1.11
VPS11-201ENST00000524454 RILPL1Q5EBL4 403 aa8.12□□□□□ -1.11
VPS11-201ENST00000524454 RRP12Q5JTH9 1297 aaKnown RBP8.12□□□□□ -1.11
VPS11-201ENST00000524454 FAM83BQ5T0W9 1011 aa8.12□□□□□ -1.11
VPS11-201ENST00000524454 WDR78Q5VTH9 848 aa8.12□□□□□ -1.11
VPS11-201ENST00000524454 MYSM1Q5VVJ2 828 aa8.12□□□□□ -1.11
VPS11-201ENST00000524454 SMYD5Q6GMV2 418 aa8.12□□□□□ -1.11
VPS11-201ENST00000524454 TMTC3Q6ZXV5 915 aa8.12□□□□□ -1.11
VPS11-201ENST00000524454 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.12□□□□□ -1.11
VPS11-201ENST00000524454 RASGRP2Q7LDG7 609 aa8.12□□□□□ -1.11
VPS11-201ENST00000524454 TEX2Q8IWB9 1127 aa8.12□□□□□ -1.11
VPS11-201ENST00000524454 ZNF444Q8N0Y2 327 aaPredicted RBP8.12□□□□□ -1.11
VPS11-201ENST00000524454 LRRC47Q8N1G4 583 aaKnown RBP8.12□□□□□ -1.11
VPS11-201ENST00000524454 ZNF713Q8N859 430 aaPredicted RBP8.12□□□□□ -1.11
VPS11-201ENST00000524454 GPRC5AQ8NFJ5 357 aa8.12□□□□□ -1.11
VPS11-201ENST00000524454 CTCFLQ8NI51 663 aaPredicted RBP8.12□□□□□ -1.11
VPS11-201ENST00000524454 ANP32BQ92688 251 aaKnown RBP8.12□□□□□ -1.11
VPS11-201ENST00000524454 CEP95Q96GE4 821 aa8.12□□□□□ -1.11
VPS11-201ENST00000524454 ZNF333Q96JL9 665 aa8.12□□□□□ -1.11
VPS11-201ENST00000524454 VCPKMTQ9H867 229 aa8.12□□□□□ -1.11
VPS11-201ENST00000524454 SH3GLB2Q9NR46 395 aa8.12□□□□□ -1.11
VPS11-201ENST00000524454 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.12□□□□□ -1.11
VPS11-201ENST00000524454 FBXO28Q9NVF7 368 aa8.12□□□□□ -1.11
VPS11-201ENST00000524454 MORF4L1Q9UBU8 362 aa8.12□□□□□ -1.11
VPS11-201ENST00000524454 BIN2Q9UBW5 565 aaPredicted RBP8.12□□□□□ -1.11
VPS11-201ENST00000524454 CLIP2Q9UDT6 1046 aa8.12□□□□□ -1.11
VPS11-201ENST00000524454 TMX2Q9Y320 296 aa8.12□□□□□ -1.11
VPS11-201ENST00000524454 IGKV6D-41A0A0C4DH26 115 aa8.11□□□□□ -1.11
VPS11-201ENST00000524454 ADCY3O60266 1144 aa8.11□□□□□ -1.11
VPS11-201ENST00000524454 PPP6R2O75170 966 aa8.11□□□□□ -1.11
VPS11-201ENST00000524454 FLOT1O75955 427 aa8.11□□□□□ -1.11
VPS11-201ENST00000524454 MMP1P03956 469 aa8.11□□□□□ -1.11
VPS11-201ENST00000524454 TSPY3P0CV98 308 aa8.11□□□□□ -1.11
VPS11-201ENST00000524454 TSPY8P0CW00 308 aa8.11□□□□□ -1.11
VPS11-201ENST00000524454 EN2P19622 333 aaPredicted RBP8.11□□□□□ -1.11
VPS11-201ENST00000524454 HOXD10P28358 340 aa8.11□□□□□ -1.11
VPS11-201ENST00000524454 GRK4P32298 578 aa8.11□□□□□ -1.11
VPS11-201ENST00000524454 TFAP4Q01664 338 aa8.11□□□□□ -1.11
VPS11-201ENST00000524454 AKAP17AQ02040 695 aaKnown RBP8.11□□□□□ -1.11
VPS11-201ENST00000524454 PTGDRQ13258 359 aa8.11□□□□□ -1.11
VPS11-201ENST00000524454 UVSSAQ2YD98 709 aa8.11□□□□□ -1.11
VPS11-201ENST00000524454 FOXD4L5Q5VV16 416 aaPredicted RBP8.11□□□□□ -1.11
VPS11-201ENST00000524454 KRT40Q6A162 431 aa8.11□□□□□ -1.11
VPS11-201ENST00000524454 ADALQ6DHV7 355 aa8.11□□□□□ -1.11
VPS11-201ENST00000524454 GALNT17Q6IS24 598 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms