RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 TRIM5Q9C035 493 aa11.26□□□□□ -0.61
VPS13B-212ENST00000524330 MAF1Q9H063 256 aa11.26□□□□□ -0.61
VPS13B-212ENST00000524330 DISC1Q9NRI5 854 aa11.26□□□□□ -0.61
VPS13B-212ENST00000524330 TMEM260Q9NX78 707 aa11.26□□□□□ -0.61
VPS13B-212ENST00000524330 LRWD1Q9UFC0 647 aa11.26□□□□□ -0.61
VPS13B-212ENST00000524330 PCDHA5Q9Y5H7 936 aa11.26□□□□□ -0.61
VPS13B-212ENST00000524330 KDM3AQ9Y4C1 1321 aa11.26□□□□□ -0.61
VPS13B-212ENST00000524330 ATAD5Q96QE3 1844 aa11.25□□□□□ -0.61
VPS13B-212ENST00000524330 IQCA1LA6NCM1 817 aa11.25□□□□□ -0.61
VPS13B-212ENST00000524330 CBFA2T2O43439 604 aa11.25□□□□□ -0.61
VPS13B-212ENST00000524330 PPP1R11O60927 126 aaPredicted RBP11.25□□□□□ -0.61
VPS13B-212ENST00000524330 MSNP26038 577 aaKnown RBP11.25□□□□□ -0.61
VPS13B-212ENST00000524330 TXKP42681 527 aa11.25□□□□□ -0.61
VPS13B-212ENST00000524330 IREB2P48200 963 aaKnown RBP11.25□□□□□ -0.61
VPS13B-212ENST00000524330 JAG1P78504 1218 aa11.25□□□□□ -0.61
VPS13B-212ENST00000524330 GRIN1Q05586 938 aa11.25□□□□□ -0.61
VPS13B-212ENST00000524330 STIM1Q13586 685 aa11.25□□□□□ -0.61
VPS13B-212ENST00000524330 UBE2SQ16763 222 aa11.25□□□□□ -0.61
VPS13B-212ENST00000524330 SHROOM1Q2M3G4 852 aaPredicted RBP11.25□□□□□ -0.61
VPS13B-212ENST00000524330 NT5DC1Q5TFE4 455 aa11.25□□□□□ -0.61
VPS13B-212ENST00000524330 C9orf131Q5VYM1 1079 aa11.25□□□□□ -0.61
VPS13B-212ENST00000524330 USP50Q70EL3 339 aaPredicted RBP11.25□□□□□ -0.61
VPS13B-212ENST00000524330 LUZP1Q86V48 1076 aa11.25□□□□□ -0.61
VPS13B-212ENST00000524330 DRC7Q8IY82 874 aa11.25□□□□□ -0.61
VPS13B-212ENST00000524330 KCTD17Q8N5Z5 321 aa11.25□□□□□ -0.61
VPS13B-212ENST00000524330 ZNF280CQ8ND82 737 aa11.25□□□□□ -0.61
VPS13B-212ENST00000524330 RBM46Q8TBY0 533 aaKnown RBP11.25□□□□□ -0.61
VPS13B-212ENST00000524330 ZC3H15Q8WU90 426 aaKnown RBP11.25□□□□□ -0.61
VPS13B-212ENST00000524330 PAGE5Q96GU1 130 aa11.25□□□□□ -0.61
VPS13B-212ENST00000524330 TANGO6Q9C0B7 1094 aa11.25□□□□□ -0.61
VPS13B-212ENST00000524330 NT5C3AQ9H0P0 336 aa11.25□□□□□ -0.61
VPS13B-212ENST00000524330 STK17AQ9UEE5 414 aa11.25□□□□□ -0.61
VPS13B-212ENST00000524330 CSADQ9Y600 493 aa11.25□□□□□ -0.61
VPS13B-212ENST00000524330 DOCK1Q14185 1865 aa11.24□□□□□ -0.61
VPS13B-212ENST00000524330 CYP3A7-CYP3A51PA0A087WV96 503 aa11.24□□□□□ -0.61
VPS13B-212ENST00000524330 BIN1O00499 593 aa11.24□□□□□ -0.61
VPS13B-212ENST00000524330 ICAM1P05362 532 aa11.24□□□□□ -0.61
VPS13B-212ENST00000524330 CYP3A7P24462 503 aa11.24□□□□□ -0.61
VPS13B-212ENST00000524330 SREBF1P36956 1147 aa11.24□□□□□ -0.61
VPS13B-212ENST00000524330 EPS15P42566 896 aa11.24□□□□□ -0.61
VPS13B-212ENST00000524330 PRELPP51888 382 aa11.24□□□□□ -0.61
VPS13B-212ENST00000524330 BACE1P56817 501 aa11.24□□□□□ -0.61
VPS13B-212ENST00000524330 ARHGAP4P98171 946 aa11.24□□□□□ -0.61
VPS13B-212ENST00000524330 MDM2Q00987 491 aaPredicted RBP11.24□□□□□ -0.61
VPS13B-212ENST00000524330 MYL5Q02045 173 aa11.24□□□□□ -0.61
VPS13B-212ENST00000524330 GPR162Q16538 588 aa11.24□□□□□ -0.61
VPS13B-212ENST00000524330 HAUS3Q68CZ6 603 aa11.24□□□□□ -0.61
VPS13B-212ENST00000524330 CCDC174Q6PII3 467 aa11.24□□□□□ -0.61
VPS13B-212ENST00000524330 SARM1Q6SZW1 724 aa11.24□□□□□ -0.61
VPS13B-212ENST00000524330 TRPM4Q8TD43 1214 aa11.24□□□□□ -0.61
VPS13B-212ENST00000524330 FAM20AQ96MK3 541 aa11.24□□□□□ -0.61
VPS13B-212ENST00000524330 TMEM60Q9H2L4 133 aa11.24□□□□□ -0.61
VPS13B-212ENST00000524330 BMP2KQ9NSY1 1161 aaPredicted RBP11.24□□□□□ -0.61
VPS13B-212ENST00000524330 CCPG1Q9ULG6 757 aa11.24□□□□□ -0.61
VPS13B-212ENST00000524330 PCDHA12Q9UN75 941 aa11.24□□□□□ -0.61
VPS13B-212ENST00000524330 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.23□□□□□ -0.61
VPS13B-212ENST00000524330 USP17L15C9J2P7 530 aa11.23□□□□□ -0.61
VPS13B-212ENST00000524330 USP17L13C9JLJ4 530 aa11.23□□□□□ -0.61
VPS13B-212ENST00000524330 USP17L11C9JVI0 530 aa11.23□□□□□ -0.61
VPS13B-212ENST00000524330 USP17L18D6R9N7 530 aa11.23□□□□□ -0.61
VPS13B-212ENST00000524330 USP17L22D6RA61 530 aa11.23□□□□□ -0.61
VPS13B-212ENST00000524330 USP17L17D6RBQ6 530 aa11.23□□□□□ -0.61
VPS13B-212ENST00000524330 USP17L19D6RCP7 530 aa11.23□□□□□ -0.61
VPS13B-212ENST00000524330 USP17L20D6RJB6 530 aa11.23□□□□□ -0.61
VPS13B-212ENST00000524330 NRDCO43847 1150 aa11.23□□□□□ -0.61
VPS13B-212ENST00000524330 FLOT1O75955 427 aa11.23□□□□□ -0.61
VPS13B-212ENST00000524330 DDNO94850 711 aaPredicted RBP11.23□□□□□ -0.61
VPS13B-212ENST00000524330 EGFRP00533 1210 aa11.23□□□□□ -0.61
VPS13B-212ENST00000524330 CYP3A4P08684 503 aa11.23□□□□□ -0.61
VPS13B-212ENST00000524330 ERCC5P28715 1186 aaPredicted RBP11.23□□□□□ -0.61
VPS13B-212ENST00000524330 CDC25BP30305 580 aa11.23□□□□□ -0.61
VPS13B-212ENST00000524330 TECP42680 631 aa11.23□□□□□ -0.61
VPS13B-212ENST00000524330 AFMP43652 599 aa11.23□□□□□ -0.61
VPS13B-212ENST00000524330 SARSP49591 514 aaKnown RBP11.23□□□□□ -0.61
VPS13B-212ENST00000524330 OAZ1P54368 228 aa11.23□□□□□ -0.61
VPS13B-212ENST00000524330 MAP3K9P80192 1104 aa11.23□□□□□ -0.61
VPS13B-212ENST00000524330 USP17L24Q0WX57 530 aa11.23□□□□□ -0.61
VPS13B-212ENST00000524330 MORC3Q14149 939 aa11.23□□□□□ -0.61
VPS13B-212ENST00000524330 IQCB1Q15051 598 aa11.23□□□□□ -0.61
VPS13B-212ENST00000524330 Q4G0T1 1027 aa11.23□□□□□ -0.61
VPS13B-212ENST00000524330 USP17L6PQ6QN14 398 aa11.23□□□□□ -0.61
VPS13B-212ENST00000524330 SAMD1Q6SPF0 538 aaPredicted RBP11.23□□□□□ -0.61
VPS13B-212ENST00000524330 C11orf57Q6ZUT1 292 aaPredicted RBP11.23□□□□□ -0.61
VPS13B-212ENST00000524330 SV2BQ7L1I2 683 aa11.23□□□□□ -0.61
VPS13B-212ENST00000524330 KRT26Q7Z3Y9 468 aa11.23□□□□□ -0.61
VPS13B-212ENST00000524330 SH3RF1Q7Z6J0 888 aa11.23□□□□□ -0.61
VPS13B-212ENST00000524330 LDHDQ86WU2 507 aa11.23□□□□□ -0.61
VPS13B-212ENST00000524330 POTEDQ86YR6 584 aa11.23□□□□□ -0.61
VPS13B-212ENST00000524330 AOPEPQ8N6M6 819 aa11.23□□□□□ -0.61
VPS13B-212ENST00000524330 IGSF22Q8N9C0 903 aa11.23□□□□□ -0.61
VPS13B-212ENST00000524330 ANKRD20A12PQ8NF67 263 aa11.23□□□□□ -0.61
VPS13B-212ENST00000524330 C12orf42Q96LP6 360 aa11.23□□□□□ -0.61
VPS13B-212ENST00000524330 MTMR9Q96QG7 549 aa11.23□□□□□ -0.61
VPS13B-212ENST00000524330 MAN1B1Q9UKM7 699 aa11.23□□□□□ -0.61
VPS13B-212ENST00000524330 MYPNQ86TC9 1320 aa11.23□□□□□ -0.61
VPS13B-212ENST00000524330 SBF1O95248 1867 aa11.23□□□□□ -0.61
VPS13B-212ENST00000524330 WNT7AO00755 349 aa11.22□□□□□ -0.61
VPS13B-212ENST00000524330 MEIS2O14770 477 aa11.22□□□□□ -0.61
VPS13B-212ENST00000524330 TDP2O95551 362 aa11.22□□□□□ -0.61
VPS13B-212ENST00000524330 CFBP00751 764 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms