RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 SUPT20HL2P0C7V6 817 aa13.9□□□□□ -0.18
SPARC-206ENST00000524277 CPT1AP50416 773 aa13.9□□□□□ -0.18
SPARC-206ENST00000524277 NUCB1Q02818 461 aa13.9□□□□□ -0.18
SPARC-206ENST00000524277 RASIP1Q5U651 963 aa13.9□□□□□ -0.18
SPARC-206ENST00000524277 RNF207Q6ZRF8 634 aa13.9□□□□□ -0.18
SPARC-206ENST00000524277 FBXO16Q8IX29 292 aaPredicted RBP13.9□□□□□ -0.18
SPARC-206ENST00000524277 RPUSD2Q8IZ73 545 aaKnown RBP13.9□□□□□ -0.18
SPARC-206ENST00000524277 MAFAQ8NHW3 353 aaPredicted RBP13.9□□□□□ -0.18
SPARC-206ENST00000524277 GPCPD1Q9NPB8 672 aa13.9□□□□□ -0.18
SPARC-206ENST00000524277 IL23AQ9NPF7 189 aa13.9□□□□□ -0.18
SPARC-206ENST00000524277 PDGFCQ9NRA1 345 aa13.9□□□□□ -0.18
SPARC-206ENST00000524277 RAD50Q92878 1312 aa13.9□□□□□ -0.19
SPARC-206ENST00000524277 FOSL2P15408 326 aa13.89□□□□□ -0.19
SPARC-206ENST00000524277 CSF2RAP15509 400 aa13.89□□□□□ -0.19
SPARC-206ENST00000524277 DNAJB2P25686 324 aa13.89□□□□□ -0.19
SPARC-206ENST00000524277 HAND2P61296 217 aa13.89□□□□□ -0.19
SPARC-206ENST00000524277 IRX5P78411 483 aaPredicted RBP13.89□□□□□ -0.19
SPARC-206ENST00000524277 EEPD1Q7L9B9 569 aa13.89□□□□□ -0.19
SPARC-206ENST00000524277 PLEKHM2Q8IWE5 1019 aa13.89□□□□□ -0.19
SPARC-206ENST00000524277 HERVK_113Q902F9 699 aa13.89□□□□□ -0.19
SPARC-206ENST00000524277 ANKS1AQ92625 1134 aa13.89□□□□□ -0.19
SPARC-206ENST00000524277 WDR11Q9BZH6 1224 aa13.89□□□□□ -0.19
SPARC-206ENST00000524277 HIPK3Q9H422 1215 aa13.89□□□□□ -0.19
SPARC-206ENST00000524277 GPHNQ9NQX3 736 aaPredicted RBP13.89□□□□□ -0.19
SPARC-206ENST00000524277 DIAPH3Q9NSV4 1193 aa13.89□□□□□ -0.19
SPARC-206ENST00000524277 CTNNA3Q9UI47 895 aa13.89□□□□□ -0.19
SPARC-206ENST00000524277 FRMPD2Q68DX3 1309 aaPredicted RBP13.89□□□□□ -0.19
SPARC-206ENST00000524277 NFIBO00712 420 aa13.88□□□□□ -0.19
SPARC-206ENST00000524277 FGBP02675 491 aa13.88□□□□□ -0.19
SPARC-206ENST00000524277 PDE4DQ08499 809 aa13.88□□□□□ -0.19
SPARC-206ENST00000524277 RAB30Q15771 203 aa13.88□□□□□ -0.19
SPARC-206ENST00000524277 B4GALNT3Q6L9W6 998 aa13.88□□□□□ -0.19
SPARC-206ENST00000524277 C16orf59Q7L2K0 433 aa13.88□□□□□ -0.19
SPARC-206ENST00000524277 RASGRP2Q7LDG7 609 aa13.88□□□□□ -0.19
SPARC-206ENST00000524277 SCFD2Q8WU76 684 aa13.88□□□□□ -0.19
SPARC-206ENST00000524277 CLEC4DQ8WXI8 215 aa13.88□□□□□ -0.19
SPARC-206ENST00000524277 MYLIPQ8WY64 445 aa13.88□□□□□ -0.19
SPARC-206ENST00000524277 TIFAQ96CG3 184 aa13.88□□□□□ -0.19
SPARC-206ENST00000524277 DSCC1Q9BVC3 393 aa13.88□□□□□ -0.19
SPARC-206ENST00000524277 PPP1R12CQ9BZL4 782 aa13.88□□□□□ -0.19
SPARC-206ENST00000524277 ZNF576Q9H609 170 aa13.88□□□□□ -0.19
SPARC-206ENST00000524277 EDNRBP24530 442 aa13.87□□□□□ -0.19
SPARC-206ENST00000524277 CALML3P27482 149 aa13.87□□□□□ -0.19
SPARC-206ENST00000524277 CYP2C18P33260 490 aa13.87□□□□□ -0.19
SPARC-206ENST00000524277 RPS6P62753 249 aaKnown RBP13.87□□□□□ -0.19
SPARC-206ENST00000524277 IMMTQ16891 758 aaKnown RBP13.87□□□□□ -0.19
SPARC-206ENST00000524277 ZNF365Q70YC5 407 aa13.87□□□□□ -0.19
SPARC-206ENST00000524277 MCF2L2Q86YR7 1114 aa13.87□□□□□ -0.19
SPARC-206ENST00000524277 TBC1D10CQ8IV04 446 aa13.87□□□□□ -0.19
SPARC-206ENST00000524277 PNMA1Q8ND90 353 aa13.87□□□□□ -0.19
SPARC-206ENST00000524277 MTG1Q9BT17 334 aaPredicted RBP13.87□□□□□ -0.19
SPARC-206ENST00000524277 KRT23Q9C075 422 aa13.87□□□□□ -0.19
SPARC-206ENST00000524277 KAT14Q9H8E8 782 aa13.87□□□□□ -0.19
SPARC-206ENST00000524277 CNNM2Q9H8M5 875 aa13.87□□□□□ -0.19
SPARC-206ENST00000524277 MSRAQ9UJ68 235 aa13.87□□□□□ -0.19
SPARC-206ENST00000524277 GRIN2DO15399 1336 aa13.87□□□□□ -0.19
SPARC-206ENST00000524277 PFKMP08237 780 aa13.86□□□□□ -0.19
SPARC-206ENST00000524277 PTPN11Q06124 597 aaPredicted RBP13.86□□□□□ -0.19
SPARC-206ENST00000524277 TTLL4Q14679 1199 aa13.86□□□□□ -0.19
SPARC-206ENST00000524277 PPP2R5BQ15173 497 aa13.86□□□□□ -0.19
SPARC-206ENST00000524277 ASPRV1Q53RT3 343 aa13.86□□□□□ -0.19
SPARC-206ENST00000524277 CWC27Q6UX04 472 aaKnown RBP13.86□□□□□ -0.19
SPARC-206ENST00000524277 OR6J1Q8NGC5 347 aa13.86□□□□□ -0.19
SPARC-206ENST00000524277 PURBQ96QR8 312 aaKnown RBP13.86□□□□□ -0.19
SPARC-206ENST00000524277 NOC4LQ9BVI4 516 aaKnown RBP13.86□□□□□ -0.19
SPARC-206ENST00000524277 ALDH8A1Q9H2A2 487 aaPredicted RBP13.86□□□□□ -0.19
SPARC-206ENST00000524277 ABCB11O95342 1321 aa13.86□□□□□ -0.19
SPARC-206ENST00000524277 UNC80Q8N2C7 3258 aa13.85□□□□□ -0.19
SPARC-206ENST00000524277 A6NJR5 290 aa13.85□□□□□ -0.19
SPARC-206ENST00000524277 B4GALT4O60513 344 aa13.85□□□□□ -0.19
SPARC-206ENST00000524277 KDM4AO75164 1064 aa13.85□□□□□ -0.19
SPARC-206ENST00000524277 ACRP10323 421 aa13.85□□□□□ -0.19
SPARC-206ENST00000524277 PURAQ00577 322 aaKnown RBP13.85□□□□□ -0.19
SPARC-206ENST00000524277 GRIN2CQ14957 1233 aa13.85□□□□□ -0.19
SPARC-206ENST00000524277 NFRKBQ6P4R8 1299 aa13.85□□□□□ -0.19
SPARC-206ENST00000524277 SLC30A10Q6XR72 485 aa13.85□□□□□ -0.19
SPARC-206ENST00000524277 SYMPKQ92797 1274 aaKnown RBP13.85□□□□□ -0.19
SPARC-206ENST00000524277 IWS1Q96ST2 819 aa13.85□□□□□ -0.19
SPARC-206ENST00000524277 ZSCAN10Q96SZ4 725 aaPredicted RBP13.85□□□□□ -0.19
SPARC-206ENST00000524277 GAS2L1Q99501 681 aaPredicted RBP13.85□□□□□ -0.19
SPARC-206ENST00000524277 COL25A1Q9BXS0 654 aaPredicted RBP13.85□□□□□ -0.19
SPARC-206ENST00000524277 PBX4Q9BYU1 374 aa13.85□□□□□ -0.19
SPARC-206ENST00000524277 TRPV6Q9H1D0 765 aa13.85□□□□□ -0.19
SPARC-206ENST00000524277 MRPL11Q9Y3B7 192 aaKnown RBP13.85□□□□□ -0.19
SPARC-206ENST00000524277 NEDD4P46934 1319 aa13.85□□□□□ -0.19
SPARC-206ENST00000524277 IGHDP01880 384 aa13.84□□□□□ -0.19
SPARC-206ENST00000524277 MYL3P08590 195 aa13.84□□□□□ -0.19
SPARC-206ENST00000524277 RFC2P35250 354 aa13.84□□□□□ -0.19
SPARC-206ENST00000524277 TRAF1Q13077 416 aa13.84□□□□□ -0.19
SPARC-206ENST00000524277 SAMD3Q8N6K7 520 aa13.84□□□□□ -0.19
SPARC-206ENST00000524277 NSUN6Q8TEA1 469 aaKnown RBP13.84□□□□□ -0.19
SPARC-206ENST00000524277 ZKSCAN3Q9BRR0 538 aa13.84□□□□□ -0.19
SPARC-206ENST00000524277 MAP3K20Q9NYL2 800 aaKnown RBP13.84□□□□□ -0.19
SPARC-206ENST00000524277 ZSWIM5Q9P217 1185 aa13.84□□□□□ -0.19
SPARC-206ENST00000524277 DDX49Q9Y6V7 483 aaKnown RBP13.84□□□□□ -0.19
SPARC-206ENST00000524277 PARP1P09874 1014 aaKnown RBP13.83□□□□□ -0.2
SPARC-206ENST00000524277 GOLGA8HP0CJ92 632 aa13.83□□□□□ -0.2
SPARC-206ENST00000524277 TXNP10599 105 aaKnown RBP13.83□□□□□ -0.2
SPARC-206ENST00000524277 CCL23P55773 120 aa13.83□□□□□ -0.2
SPARC-206ENST00000524277 PSMC6P62333 389 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms