RNA–Protein interactions for RNA: ENST00000523931.1

NDRG1-228, Transcript of N-myc downstream regulated 1, humanhuman

TSL 3

Gene NDRG1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-228ENST00000523931 GNEQ9Y223 722 aaKnown RBP11.86□□□□□ -0.51
NDRG1-228ENST00000523931 RIPK3Q9Y572 518 aa11.86□□□□□ -0.51
NDRG1-228ENST00000523931 CHD8Q9HCK8 2581 aa11.86□□□□□ -0.51
NDRG1-228ENST00000523931 ACACBO00763 2458 aa11.85□□□□□ -0.51
NDRG1-228ENST00000523931 LINC01553A4QN01 128 aa11.85□□□□□ -0.51
NDRG1-228ENST00000523931 PITPNM1O00562 1244 aa11.85□□□□□ -0.51
NDRG1-228ENST00000523931 IQCF3P0C7M6 154 aa11.85□□□□□ -0.51
NDRG1-228ENST00000523931 PTGS1P23219 599 aa11.85□□□□□ -0.51
NDRG1-228ENST00000523931 ZAP70P43403 619 aa11.85□□□□□ -0.51
NDRG1-228ENST00000523931 EVX2Q03828 476 aa11.85□□□□□ -0.51
NDRG1-228ENST00000523931 PTPROQ16827 1216 aa11.85□□□□□ -0.51
NDRG1-228ENST00000523931 FAM47CQ5HY64 1035 aa11.85□□□□□ -0.51
NDRG1-228ENST00000523931 FAM83BQ5T0W9 1011 aa11.85□□□□□ -0.51
NDRG1-228ENST00000523931 PPP4R3CPQ6ZMV5 832 aa11.85□□□□□ -0.51
NDRG1-228ENST00000523931 TRIM67Q6ZTA4 783 aa11.85□□□□□ -0.51
NDRG1-228ENST00000523931 FBXL6Q8N531 539 aa11.85□□□□□ -0.51
NDRG1-228ENST00000523931 FBXO22Q8NEZ5 403 aa11.85□□□□□ -0.51
NDRG1-228ENST00000523931 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.85□□□□□ -0.51
NDRG1-228ENST00000523931 PABPC5Q96DU9 382 aaKnown RBP11.85□□□□□ -0.51
NDRG1-228ENST00000523931 MRPL38Q96DV4 380 aaKnown RBP11.85□□□□□ -0.51
NDRG1-228ENST00000523931 RAD9AQ99638 391 aa11.85□□□□□ -0.51
NDRG1-228ENST00000523931 GOPCQ9HD26 462 aa11.85□□□□□ -0.51
NDRG1-228ENST00000523931 MCM9Q9NXL9 1143 aa11.85□□□□□ -0.51
NDRG1-228ENST00000523931 CTNNA3Q9UI47 895 aa11.85□□□□□ -0.51
NDRG1-228ENST00000523931 KMT2EQ8IZD2 1858 aa11.85□□□□□ -0.51
NDRG1-228ENST00000523931 AKR1B1P15121 316 aa11.84□□□□□ -0.51
NDRG1-228ENST00000523931 ID4P47928 161 aa11.84□□□□□ -0.51
NDRG1-228ENST00000523931 DEFB103AP81534 67 aa11.84□□□□□ -0.51
NDRG1-228ENST00000523931 C1QBPQ07021 282 aaKnown RBP11.84□□□□□ -0.51
NDRG1-228ENST00000523931 ANKRD45Q5TZF3 282 aa11.84□□□□□ -0.51
NDRG1-228ENST00000523931 CPXCR1Q8N123 301 aa11.84□□□□□ -0.51
NDRG1-228ENST00000523931 GPATCH3Q96I76 525 aa11.84□□□□□ -0.51
NDRG1-228ENST00000523931 SLF1Q9BQI6 1058 aa11.84□□□□□ -0.51
NDRG1-228ENST00000523931 CTDP1Q9Y5B0 961 aaPredicted RBP11.84□□□□□ -0.51
NDRG1-228ENST00000523931 EP300Q09472 2414 aaPredicted RBP11.84□□□□□ -0.51
NDRG1-228ENST00000523931 DCHS1Q96JQ0 3298 aa11.84□□□□□ -0.51
NDRG1-228ENST00000523931 PLXNA3P51805 1871 aa11.83□□□□□ -0.52
NDRG1-228ENST00000523931 SOWAHBA6NEL2 793 aa11.83□□□□□ -0.52
NDRG1-228ENST00000523931 GJB5O95377 273 aa11.83□□□□□ -0.52
NDRG1-228ENST00000523931 EEF2P13639 858 aaKnown RBP11.83□□□□□ -0.52
NDRG1-228ENST00000523931 SMPD1P17405 629 aa11.83□□□□□ -0.52
NDRG1-228ENST00000523931 ATP5JP18859 108 aa11.83□□□□□ -0.52
NDRG1-228ENST00000523931 BFSP2Q13515 415 aa11.83□□□□□ -0.52
NDRG1-228ENST00000523931 ERICH6BQ5W0A0 696 aa11.83□□□□□ -0.52
NDRG1-228ENST00000523931 BANK1Q8NDB2 785 aa11.83□□□□□ -0.52
NDRG1-228ENST00000523931 ECHDC1Q9NTX5 307 aa11.83□□□□□ -0.52
NDRG1-228ENST00000523931 CLDND1Q9NY35 253 aa11.83□□□□□ -0.52
NDRG1-228ENST00000523931 SWAP70Q9UH65 585 aa11.83□□□□□ -0.52
NDRG1-228ENST00000523931 FBXO40Q9UH90 709 aa11.83□□□□□ -0.52
NDRG1-228ENST00000523931 KMT2BQ9UMN6 2715 aaPredicted RBP11.83□□□□□ -0.52
NDRG1-228ENST00000523931 BAHCC1Q9P281 2608 aa11.83□□□□□ -0.52
NDRG1-228ENST00000523931 TRIP12Q14669 1992 aaPredicted RBP11.82□□□□□ -0.52
NDRG1-228ENST00000523931 KRT37O76014 449 aa11.82□□□□□ -0.52
NDRG1-228ENST00000523931 IGHDP01880 384 aa11.82□□□□□ -0.52
NDRG1-228ENST00000523931 CNTN2Q02246 1040 aa11.82□□□□□ -0.52
NDRG1-228ENST00000523931 TTF1Q15361 905 aaPredicted RBP11.82□□□□□ -0.52
NDRG1-228ENST00000523931 SMAD2Q15796 467 aaKnown RBP11.82□□□□□ -0.52
NDRG1-228ENST00000523931 CLUL1Q15846 466 aa11.82□□□□□ -0.52
NDRG1-228ENST00000523931 TCEAL5Q5H9L2 206 aa11.82□□□□□ -0.52
NDRG1-228ENST00000523931 FAM117BQ6P1L5 589 aa11.82□□□□□ -0.52
NDRG1-228ENST00000523931 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.82□□□□□ -0.52
NDRG1-228ENST00000523931 ASCL5Q7RTU5 278 aa11.82□□□□□ -0.52
NDRG1-228ENST00000523931 SMC5Q8IY18 1101 aa11.82□□□□□ -0.52
NDRG1-228ENST00000523931 DNAJC2Q99543 621 aaKnown RBP11.82□□□□□ -0.52
NDRG1-228ENST00000523931 C17orf80Q9BSJ5 609 aa11.82□□□□□ -0.52
NDRG1-228ENST00000523931 CRNKL1Q9BZJ0 848 aaKnown RBP11.82□□□□□ -0.52
NDRG1-228ENST00000523931 BOLA2Q9H3K6 86 aa11.82□□□□□ -0.52
NDRG1-228ENST00000523931 POLR3EQ9NVU0 708 aa11.82□□□□□ -0.52
NDRG1-228ENST00000523931 NOD1Q9Y239 953 aa11.82□□□□□ -0.52
NDRG1-228ENST00000523931 ASB14A6NK59 587 aa11.81□□□□□ -0.52
NDRG1-228ENST00000523931 H0Y858 1186 aa11.81□□□□□ -0.52
NDRG1-228ENST00000523931 ATP2A1O14983 1001 aa11.81□□□□□ -0.52
NDRG1-228ENST00000523931 ZBED4O75132 1171 aa11.81□□□□□ -0.52
NDRG1-228ENST00000523931 MYL3P08590 195 aa11.81□□□□□ -0.52
NDRG1-228ENST00000523931 CYP2D6P10635 497 aa11.81□□□□□ -0.52
NDRG1-228ENST00000523931 LRRFIP1Q32MZ4 808 aaKnown RBP11.81□□□□□ -0.52
NDRG1-228ENST00000523931 CHST13Q8NET6 341 aa11.81□□□□□ -0.52
NDRG1-228ENST00000523931 DYNLL2Q96FJ2 89 aa11.81□□□□□ -0.52
NDRG1-228ENST00000523931 CCDC17Q96LX7 622 aa11.81□□□□□ -0.52
NDRG1-228ENST00000523931 NUP88Q99567 741 aaPredicted RBP11.81□□□□□ -0.52
NDRG1-228ENST00000523931 FSD1Q9BTV5 496 aa11.81□□□□□ -0.52
NDRG1-228ENST00000523931 ANTXR1Q9H6X2 564 aa11.81□□□□□ -0.52
NDRG1-228ENST00000523931 KANSL2Q9H9L4 492 aa11.81□□□□□ -0.52
NDRG1-228ENST00000523931 RAVER2Q9HCJ3 691 aaKnown RBP11.81□□□□□ -0.52
NDRG1-228ENST00000523931 ALG13Q9NP73 1137 aaKnown RBP11.81□□□□□ -0.52
NDRG1-228ENST00000523931 GPHNQ9NQX3 736 aaPredicted RBP11.81□□□□□ -0.52
NDRG1-228ENST00000523931 TLR9Q9NR96 1032 aa11.81□□□□□ -0.52
NDRG1-228ENST00000523931 HOMER2Q9NSB8 354 aa11.81□□□□□ -0.52
NDRG1-228ENST00000523931 TRPC6Q9Y210 931 aa11.81□□□□□ -0.52
NDRG1-228ENST00000523931 Q9Y3F1 56 aa11.81□□□□□ -0.52
NDRG1-228ENST00000523931 ZNF292O60281 2723 aa11.81□□□□□ -0.52
NDRG1-228ENST00000523931 MAGEB6P1A0A0J9YX57 407 aa11.8□□□□□ -0.52
NDRG1-228ENST00000523931 PRR23AA6NEV1 266 aa11.8□□□□□ -0.52
NDRG1-228ENST00000523931 PROB1E7EW31 1015 aa11.8□□□□□ -0.52
NDRG1-228ENST00000523931 GOLIM4O00461 696 aa11.8□□□□□ -0.52
NDRG1-228ENST00000523931 VCPP55072 806 aaKnown RBP11.8□□□□□ -0.52
NDRG1-228ENST00000523931 PURAQ00577 322 aaKnown RBP11.8□□□□□ -0.52
NDRG1-228ENST00000523931 COL19A1Q14993 1142 aa11.8□□□□□ -0.52
NDRG1-228ENST00000523931 NBPF20Q3BBV1 942 aa11.8□□□□□ -0.52
NDRG1-228ENST00000523931 IQSEC1Q6DN90 963 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms