RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 B4GALT4O60513 344 aa18.16■□□□□ 0.5
MRPS28-209ENST00000522987 MYL3P08590 195 aa18.16■□□□□ 0.5
MRPS28-209ENST00000522987 FGRP09769 529 aa18.16■□□□□ 0.5
MRPS28-209ENST00000522987 PDHBP11177 359 aa18.16■□□□□ 0.5
MRPS28-209ENST00000522987 NOVP48745 357 aa18.16■□□□□ 0.5
MRPS28-209ENST00000522987 HDAC1Q13547 482 aaPredicted RBP18.16■□□□□ 0.5
MRPS28-209ENST00000522987 USH1GQ495M9 461 aa18.16■□□□□ 0.5
MRPS28-209ENST00000522987 IQSEC1Q6DN90 963 aa18.16■□□□□ 0.5
MRPS28-209ENST00000522987 USP38Q8NB14 1042 aa18.16■□□□□ 0.5
MRPS28-209ENST00000522987 PBX4Q9BYU1 374 aa18.16■□□□□ 0.5
MRPS28-209ENST00000522987 VTA1Q9NP79 307 aa18.16■□□□□ 0.5
MRPS28-209ENST00000522987 CXXC1Q9P0U4 656 aaPredicted RBP18.16■□□□□ 0.5
MRPS28-209ENST00000522987 NKX3-2P78367 333 aa18.15■□□□□ 0.5
MRPS28-209ENST00000522987 BTNL9Q6UXG8 535 aa18.15■□□□□ 0.5
MRPS28-209ENST00000522987 MFSD6Q6ZSS7 791 aa18.15■□□□□ 0.5
MRPS28-209ENST00000522987 OTOP2Q7RTS6 562 aa18.15■□□□□ 0.5
MRPS28-209ENST00000522987 SLC43A3Q8NBI5 491 aa18.15■□□□□ 0.5
MRPS28-209ENST00000522987 CLEC4DQ8WXI8 215 aa18.15■□□□□ 0.5
MRPS28-209ENST00000522987 SCLYQ96I15 445 aa18.15■□□□□ 0.5
MRPS28-209ENST00000522987 WDR11Q9BZH6 1224 aa18.15■□□□□ 0.5
MRPS28-209ENST00000522987 UBA5Q9GZZ9 404 aa18.15■□□□□ 0.5
MRPS28-209ENST00000522987 PRDM12Q9H4Q4 367 aa18.15■□□□□ 0.5
MRPS28-209ENST00000522987 IL23AQ9NPF7 189 aa18.15■□□□□ 0.5
MRPS28-209ENST00000522987 PRDM6Q9NQX0 595 aa18.15■□□□□ 0.5
MRPS28-209ENST00000522987 CDH23Q9H251 3354 aa18.15■□□□□ 0.5
MRPS28-209ENST00000522987 ZEB2O60315 1214 aa18.14■□□□□ 0.49
MRPS28-209ENST00000522987 CYP2C9P11712 490 aa18.14■□□□□ 0.49
MRPS28-209ENST00000522987 CHMP4BP1P59074 171 aa18.14■□□□□ 0.49
MRPS28-209ENST00000522987 ZNF543Q08ER8 600 aa18.14■□□□□ 0.49
MRPS28-209ENST00000522987 AKNAD1Q5T1N1 836 aa18.14■□□□□ 0.49
MRPS28-209ENST00000522987 PSRC1Q6PGN9 363 aaPredicted RBP18.14■□□□□ 0.49
MRPS28-209ENST00000522987 OR6J1Q8NGC5 347 aa18.14■□□□□ 0.49
MRPS28-209ENST00000522987 COPS5Q92905 334 aa18.14■□□□□ 0.49
MRPS28-209ENST00000522987 WNT8AQ9H1J5 351 aa18.14■□□□□ 0.49
MRPS28-209ENST00000522987 SCN10AQ9Y5Y9 1956 aa18.13■□□□□ 0.49
MRPS28-209ENST00000522987 TMEM265A0A087WTH1 108 aa18.13■□□□□ 0.49
MRPS28-209ENST00000522987 RBAK-RBAKDNI3L0D1 243 aa18.13■□□□□ 0.49
MRPS28-209ENST00000522987 CABYRO75952 493 aa18.13■□□□□ 0.49
MRPS28-209ENST00000522987 SDSP20132 328 aa18.13■□□□□ 0.49
MRPS28-209ENST00000522987 RNF207Q6ZRF8 634 aa18.13■□□□□ 0.49
MRPS28-209ENST00000522987 NOC4LQ9BVI4 516 aaKnown RBP18.13■□□□□ 0.49
MRPS28-209ENST00000522987 NKX2-4Q9H2Z4 354 aa18.13■□□□□ 0.49
MRPS28-209ENST00000522987 TCP11L1Q9NUJ3 509 aa18.13■□□□□ 0.49
MRPS28-209ENST00000522987 TRMT13Q9NUP7 481 aaKnown RBP18.13■□□□□ 0.49
MRPS28-209ENST00000522987 ADD3Q9UEY8 706 aaKnown RBP18.13■□□□□ 0.49
MRPS28-209ENST00000522987 IGHDP01880 384 aa18.12■□□□□ 0.49
MRPS28-209ENST00000522987 FGBP02675 491 aa18.12■□□□□ 0.49
MRPS28-209ENST00000522987 RABGGTBP53611 331 aa18.12■□□□□ 0.49
MRPS28-209ENST00000522987 RPS6P62753 249 aaKnown RBP18.12■□□□□ 0.49
MRPS28-209ENST00000522987 PDE4DQ08499 809 aa18.12■□□□□ 0.49
MRPS28-209ENST00000522987 DUSP28Q4G0W2 176 aa18.12■□□□□ 0.49
MRPS28-209ENST00000522987 FAM47CQ5HY64 1035 aa18.12■□□□□ 0.49
MRPS28-209ENST00000522987 RASIP1Q5U651 963 aa18.12■□□□□ 0.49
MRPS28-209ENST00000522987 CWC27Q6UX04 472 aaKnown RBP18.12■□□□□ 0.49
MRPS28-209ENST00000522987 TET1Q8NFU7 2136 aa18.12■□□□□ 0.49
MRPS28-209ENST00000522987 MORC4Q8TE76 937 aa18.12■□□□□ 0.49
MRPS28-209ENST00000522987 TANC1Q9C0D5 1861 aa18.12■□□□□ 0.49
MRPS28-209ENST00000522987 ZBBXA8MT70 800 aa18.11■□□□□ 0.49
MRPS28-209ENST00000522987 KDM4AO75164 1064 aa18.11■□□□□ 0.49
MRPS28-209ENST00000522987 CCDC85BQ15834 202 aaPredicted RBP18.11■□□□□ 0.49
MRPS28-209ENST00000522987 DEFB128Q7Z7B8 93 aa18.11■□□□□ 0.49
MRPS28-209ENST00000522987 PLEKHM2Q8IWE5 1019 aa18.11■□□□□ 0.49
MRPS28-209ENST00000522987 TBC1D5Q92609 795 aa18.11■□□□□ 0.49
MRPS28-209ENST00000522987 ALDH8A1Q9H2A2 487 aaPredicted RBP18.11■□□□□ 0.49
MRPS28-209ENST00000522987 YBX2Q9Y2T7 364 aaKnown RBP18.11■□□□□ 0.49
MRPS28-209ENST00000522987 ZMYM6O95789 1325 aa18.11■□□□□ 0.49
MRPS28-209ENST00000522987 BAZ2BQ9UIF8 2168 aaKnown RBP18.1■□□□□ 0.49
MRPS28-209ENST00000522987 TCF20Q9UGU0 1960 aaKnown RBP18.1■□□□□ 0.49
MRPS28-209ENST00000522987 B4E1Z4 1266 aa18.1■□□□□ 0.49
MRPS28-209ENST00000522987 ZNF213O14771 459 aa18.1■□□□□ 0.49
MRPS28-209ENST00000522987 MYOGP15173 224 aa18.1■□□□□ 0.49
MRPS28-209ENST00000522987 PURAQ00577 322 aaKnown RBP18.1■□□□□ 0.49
MRPS28-209ENST00000522987 HERVK_113Q902F9 699 aa18.1■□□□□ 0.49
MRPS28-209ENST00000522987 ESR2Q92731 530 aa18.1■□□□□ 0.49
MRPS28-209ENST00000522987 GAS2L1Q99501 681 aaPredicted RBP18.1■□□□□ 0.49
MRPS28-209ENST00000522987 DIAPH3Q9NSV4 1193 aa18.1■□□□□ 0.49
MRPS28-209ENST00000522987 MSRAQ9UJ68 235 aa18.1■□□□□ 0.49
MRPS28-209ENST00000522987 Q9Y3F1 56 aa18.1■□□□□ 0.49
MRPS28-209ENST00000522987 PTPRSQ13332 1948 aa18.1■□□□□ 0.49
MRPS28-209ENST00000522987 TNKSO95271 1327 aa18.09■□□□□ 0.49
MRPS28-209ENST00000522987 IGFBP4P22692 258 aa18.09■□□□□ 0.49
MRPS28-209ENST00000522987 PPP2R5BQ15173 497 aa18.09■□□□□ 0.49
MRPS28-209ENST00000522987 CHD1LQ86WJ1 897 aa18.09■□□□□ 0.49
MRPS28-209ENST00000522987 SMC5Q8IY18 1101 aa18.09■□□□□ 0.49
MRPS28-209ENST00000522987 EXOC6Q8TAG9 804 aa18.09■□□□□ 0.49
MRPS28-209ENST00000522987 RWDD1Q9H446 243 aaPredicted RBP18.09■□□□□ 0.49
MRPS28-209ENST00000522987 RNF41Q9H4P4 317 aaPredicted RBP18.09■□□□□ 0.49
MRPS28-209ENST00000522987 VAT1LQ9HCJ6 419 aa18.09■□□□□ 0.49
MRPS28-209ENST00000522987 GPHNQ9NQX3 736 aaPredicted RBP18.09■□□□□ 0.49
MRPS28-209ENST00000522987 POLR3EQ9NVU0 708 aa18.09■□□□□ 0.49
MRPS28-209ENST00000522987 DHX16O60231 1041 aaKnown RBP18.08■□□□□ 0.48
MRPS28-209ENST00000522987 ARIH2O95376 493 aa18.08■□□□□ 0.48
MRPS28-209ENST00000522987 SNHG28P0DPA3 235 aa18.08■□□□□ 0.48
MRPS28-209ENST00000522987 TXNP10599 105 aaKnown RBP18.08■□□□□ 0.48
MRPS28-209ENST00000522987 CPT1AP50416 773 aa18.08■□□□□ 0.48
MRPS28-209ENST00000522987 ADGRE1Q14246 886 aa18.08■□□□□ 0.48
MRPS28-209ENST00000522987 CDC37Q16543 378 aaPredicted RBP18.08■□□□□ 0.48
MRPS28-209ENST00000522987 NBPF20Q3BBV1 942 aa18.08■□□□□ 0.48
MRPS28-209ENST00000522987 PNMA1Q8ND90 353 aa18.08■□□□□ 0.48
MRPS28-209ENST00000522987 TTC14Q96N46 770 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms