RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 GMCL1P1Q8NEA9 526 aa9.79□□□□□ -0.84
VPS13B-210ENST00000521932 BRI3BPQ8WY22 251 aa9.79□□□□□ -0.84
VPS13B-210ENST00000521932 JAKMIP1Q96N16 626 aaKnown RBP9.79□□□□□ -0.84
VPS13B-210ENST00000521932 PTPN18Q99952 460 aa9.79□□□□□ -0.84
VPS13B-210ENST00000521932 TMEM47Q9BQJ4 181 aa9.79□□□□□ -0.84
VPS13B-210ENST00000521932 UBAC1Q9BSL1 405 aa9.79□□□□□ -0.84
VPS13B-210ENST00000521932 AGXT2Q9BYV1 514 aa9.79□□□□□ -0.84
VPS13B-210ENST00000521932 C22orf23Q9BZE7 217 aa9.79□□□□□ -0.84
VPS13B-210ENST00000521932 UPF2Q9HAU5 1272 aaKnown RBP9.79□□□□□ -0.84
VPS13B-210ENST00000521932 ZCCHC17Q9NP64 241 aaKnown RBP9.79□□□□□ -0.84
VPS13B-210ENST00000521932 STX8Q9UNK0 236 aa9.79□□□□□ -0.84
VPS13B-210ENST00000521932 SLC45A1Q9Y2W3 748 aa9.79□□□□□ -0.84
VPS13B-210ENST00000521932 CCL15-CCL14A0A0B4J2E2 113 aa9.78□□□□□ -0.84
VPS13B-210ENST00000521932 ERICH2A1L162 156 aa9.78□□□□□ -0.84
VPS13B-210ENST00000521932 IFIT3O14879 490 aaKnown RBP9.78□□□□□ -0.84
VPS13B-210ENST00000521932 PRC1O43663 620 aa9.78□□□□□ -0.84
VPS13B-210ENST00000521932 RPS6KB1P23443 525 aa9.78□□□□□ -0.84
VPS13B-210ENST00000521932 HOXA7P31268 230 aaPredicted RBP9.78□□□□□ -0.84
VPS13B-210ENST00000521932 GRM1Q13255 1194 aa9.78□□□□□ -0.84
VPS13B-210ENST00000521932 CCL15Q16663 113 aa9.78□□□□□ -0.84
VPS13B-210ENST00000521932 INTS6LQ5JSJ4 861 aaKnown RBP9.78□□□□□ -0.84
VPS13B-210ENST00000521932 KIAA1755Q5JYT7 1200 aa9.78□□□□□ -0.84
VPS13B-210ENST00000521932 C6orf118Q5T5N4 469 aa9.78□□□□□ -0.84
VPS13B-210ENST00000521932 BLOC1S2Q6QNY1 142 aa9.78□□□□□ -0.84
VPS13B-210ENST00000521932 ANKRD23Q86SG2 305 aa9.78□□□□□ -0.84
VPS13B-210ENST00000521932 TBC1D32Q96NH3 1257 aa9.78□□□□□ -0.84
VPS13B-210ENST00000521932 KIF2CQ99661 725 aa9.78□□□□□ -0.84
VPS13B-210ENST00000521932 TMOD4Q9NZQ9 345 aa9.78□□□□□ -0.84
VPS13B-210ENST00000521932 AGTPBP1Q9UPW5 1226 aa9.78□□□□□ -0.84
VPS13B-210ENST00000521932 BTBD19C9JJ37 291 aa9.77□□□□□ -0.85
VPS13B-210ENST00000521932 SH2B2O14492 632 aaPredicted RBP9.77□□□□□ -0.85
VPS13B-210ENST00000521932 SNHG28P0DPA3 235 aa9.77□□□□□ -0.85
VPS13B-210ENST00000521932 VCAM1P19320 739 aa9.77□□□□□ -0.85
VPS13B-210ENST00000521932 CASTP20810 708 aaKnown RBP9.77□□□□□ -0.85
VPS13B-210ENST00000521932 ATP2B2Q01814 1243 aa9.77□□□□□ -0.85
VPS13B-210ENST00000521932 CBLBQ13191 982 aa9.77□□□□□ -0.85
VPS13B-210ENST00000521932 DGKZQ13574 1117 aa9.77□□□□□ -0.85
VPS13B-210ENST00000521932 WTAPQ15007 396 aa9.77□□□□□ -0.85
VPS13B-210ENST00000521932 ZYXQ15942 572 aaKnown RBP9.77□□□□□ -0.85
VPS13B-210ENST00000521932 IFIT1BQ5T764 474 aaKnown RBP9.77□□□□□ -0.85
VPS13B-210ENST00000521932 SGMS1Q86VZ5 419 aa9.77□□□□□ -0.85
VPS13B-210ENST00000521932 LINC00528Q8N1L1 170 aa9.77□□□□□ -0.85
VPS13B-210ENST00000521932 GMCL1Q96IK5 515 aa9.77□□□□□ -0.85
VPS13B-210ENST00000521932 FEZ1Q99689 392 aa9.77□□□□□ -0.85
VPS13B-210ENST00000521932 ALDH8A1Q9H2A2 487 aaPredicted RBP9.77□□□□□ -0.85
VPS13B-210ENST00000521932 KAT14Q9H8E8 782 aa9.77□□□□□ -0.85
VPS13B-210ENST00000521932 LY9Q9HBG7 655 aa9.77□□□□□ -0.85
VPS13B-210ENST00000521932 CYP46A1Q9Y6A2 500 aa9.77□□□□□ -0.85
VPS13B-210ENST00000521932 USP17L15C9J2P7 530 aa9.76□□□□□ -0.85
VPS13B-210ENST00000521932 USP17L13C9JLJ4 530 aa9.76□□□□□ -0.85
VPS13B-210ENST00000521932 USP17L11C9JVI0 530 aa9.76□□□□□ -0.85
VPS13B-210ENST00000521932 USP17L18D6R9N7 530 aa9.76□□□□□ -0.85
VPS13B-210ENST00000521932 USP17L22D6RA61 530 aa9.76□□□□□ -0.85
VPS13B-210ENST00000521932 USP17L17D6RBQ6 530 aa9.76□□□□□ -0.85
VPS13B-210ENST00000521932 USP17L19D6RCP7 530 aa9.76□□□□□ -0.85
VPS13B-210ENST00000521932 USP17L20D6RJB6 530 aa9.76□□□□□ -0.85
VPS13B-210ENST00000521932 IGF2BP3O00425 579 aaKnown RBP eCLIP9.76□□□□□ -0.85
VPS13B-210ENST00000521932 WDR46O15213 610 aaKnown RBP9.76□□□□□ -0.85
VPS13B-210ENST00000521932 NDUFB10O96000 172 aa9.76□□□□□ -0.85
VPS13B-210ENST00000521932 PDHBP11177 359 aa9.76□□□□□ -0.85
VPS13B-210ENST00000521932 CPA1P15085 419 aa9.76□□□□□ -0.85
VPS13B-210ENST00000521932 EVCP57679 992 aa9.76□□□□□ -0.85
VPS13B-210ENST00000521932 MAP2K1Q02750 393 aaPredicted RBP9.76□□□□□ -0.85
VPS13B-210ENST00000521932 USP17L24Q0WX57 530 aa9.76□□□□□ -0.85
VPS13B-210ENST00000521932 TROAPQ12815 778 aa9.76□□□□□ -0.85
VPS13B-210ENST00000521932 PABPC4Q13310 644 aaKnown RBP eCLIP9.76□□□□□ -0.85
VPS13B-210ENST00000521932 TMEM67Q5HYA8 995 aa9.76□□□□□ -0.85
VPS13B-210ENST00000521932 TREML2Q5T2D2 321 aa9.76□□□□□ -0.85
VPS13B-210ENST00000521932 OTUD7BQ6GQQ9 843 aa9.76□□□□□ -0.85
VPS13B-210ENST00000521932 GADL1Q6ZQY3 521 aa9.76□□□□□ -0.85
VPS13B-210ENST00000521932 CATSPERGQ6ZRH7 1159 aa9.76□□□□□ -0.85
VPS13B-210ENST00000521932 LRRC47Q8N1G4 583 aaKnown RBP9.76□□□□□ -0.85
VPS13B-210ENST00000521932 FAM43AQ8N2R8 423 aa9.76□□□□□ -0.85
VPS13B-210ENST00000521932 JMYQ8N9B5 988 aa9.76□□□□□ -0.85
VPS13B-210ENST00000521932 PNMA1Q8ND90 353 aa9.76□□□□□ -0.85
VPS13B-210ENST00000521932 MAP3K14Q99558 947 aa9.76□□□□□ -0.85
VPS13B-210ENST00000521932 CFHR5Q9BXR6 569 aa9.76□□□□□ -0.85
VPS13B-210ENST00000521932 THSD7BQ9C0I4 1608 aa9.75□□□□□ -0.85
VPS13B-210ENST00000521932 PDHXO00330 501 aa9.75□□□□□ -0.85
VPS13B-210ENST00000521932 PLA2G6O60733 806 aa9.75□□□□□ -0.85
VPS13B-210ENST00000521932 BMP3P12645 472 aa9.75□□□□□ -0.85
VPS13B-210ENST00000521932 SLC1A4P43007 532 aa9.75□□□□□ -0.85
VPS13B-210ENST00000521932 SLFN13Q68D06 897 aa9.75□□□□□ -0.85
VPS13B-210ENST00000521932 Q6ZUG5 572 aa9.75□□□□□ -0.85
VPS13B-210ENST00000521932 SPICE1Q8N0Z3 855 aa9.75□□□□□ -0.85
VPS13B-210ENST00000521932 CCDC82Q8N4S0 544 aa9.75□□□□□ -0.85
VPS13B-210ENST00000521932 DCAF4Q8WV16 495 aa9.75□□□□□ -0.85
VPS13B-210ENST00000521932 LRRC2Q9BYS8 371 aa9.75□□□□□ -0.85
VPS13B-210ENST00000521932 UPF3BQ9BZI7 483 aaKnown RBP9.75□□□□□ -0.85
VPS13B-210ENST00000521932 RPAP3Q9H6T3 665 aaPredicted RBP9.75□□□□□ -0.85
VPS13B-210ENST00000521932 HOXC10Q9NYD6 342 aa9.75□□□□□ -0.85
VPS13B-210ENST00000521932 PTPRFP10586 1907 aa9.75□□□□□ -0.85
VPS13B-210ENST00000521932 LOC285556D6RIA3 1793 aa9.74□□□□□ -0.85
VPS13B-210ENST00000521932 CCDC69A6NI79 296 aa9.74□□□□□ -0.85
VPS13B-210ENST00000521932 CA12O43570 354 aa9.74□□□□□ -0.85
VPS13B-210ENST00000521932 FBXO45P0C2W1 286 aa9.74□□□□□ -0.85
VPS13B-210ENST00000521932 CALM1P0DP23 149 aa9.74□□□□□ -0.85
VPS13B-210ENST00000521932 CALM2P0DP24 149 aa9.74□□□□□ -0.85
VPS13B-210ENST00000521932 CALM3P0DP25 149 aa9.74□□□□□ -0.85
VPS13B-210ENST00000521932 NEK4P51957 841 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms