RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 MFSD14BQ5SR56 506 aa7.67□□□□□ -1.18
CTNNA1-228ENST00000521640 LCE2AQ5TA79 106 aaPredicted RBP7.67□□□□□ -1.18
CTNNA1-228ENST00000521640 KANK3Q6NY19 840 aa7.67□□□□□ -1.18
CTNNA1-228ENST00000521640 HHIPL2Q6UWX4 724 aa7.67□□□□□ -1.18
CTNNA1-228ENST00000521640 PODNQ7Z5L7 613 aa7.67□□□□□ -1.18
CTNNA1-228ENST00000521640 COL23A1Q86Y22 540 aaPredicted RBP7.67□□□□□ -1.18
CTNNA1-228ENST00000521640 RAB11FIP4Q86YS3 637 aa7.67□□□□□ -1.18
CTNNA1-228ENST00000521640 CCDC144CPQ8IYA2 1237 aa7.67□□□□□ -1.18
CTNNA1-228ENST00000521640 ZNF444Q8N0Y2 327 aaPredicted RBP7.67□□□□□ -1.18
CTNNA1-228ENST00000521640 DEPDC4Q8N2C3 294 aa7.67□□□□□ -1.18
CTNNA1-228ENST00000521640 ZNF713Q8N859 430 aaPredicted RBP7.67□□□□□ -1.18
CTNNA1-228ENST00000521640 DAGLBQ8NCG7 672 aa7.67□□□□□ -1.18
CTNNA1-228ENST00000521640 NEDD1Q8NHV4 660 aa7.67□□□□□ -1.18
CTNNA1-228ENST00000521640 NUP133Q8WUM0 1156 aa7.67□□□□□ -1.18
CTNNA1-228ENST00000521640 TNFRSF25Q93038 417 aa7.67□□□□□ -1.18
CTNNA1-228ENST00000521640 FERMT2Q96AC1 680 aa7.67□□□□□ -1.18
CTNNA1-228ENST00000521640 AIFM3Q96NN9 605 aa7.67□□□□□ -1.18
CTNNA1-228ENST00000521640 KAT14Q9H8E8 782 aa7.67□□□□□ -1.18
CTNNA1-228ENST00000521640 CBX8Q9HC52 389 aa7.67□□□□□ -1.18
CTNNA1-228ENST00000521640 SWAP70Q9UH65 585 aa7.67□□□□□ -1.18
CTNNA1-228ENST00000521640 TUBE1Q9UJT0 475 aa7.67□□□□□ -1.18
CTNNA1-228ENST00000521640 SRPRBQ9Y5M8 271 aaKnown RBP7.67□□□□□ -1.18
CTNNA1-228ENST00000521640 FLT1P17948 1338 aa7.67□□□□□ -1.18
CTNNA1-228ENST00000521640 COL2A1P02458 1487 aaPredicted RBP7.67□□□□□ -1.18
CTNNA1-228ENST00000521640 GREB1LQ9C091 1923 aaPredicted RBP7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 CYP2D7A0A087X1C5 515 aa7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 TRIM75PA6NK02 468 aa7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 USP17L5A8MUK1 530 aa7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 BTBD18B2RXH4 712 aa7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 GOLGA6L19H0YKK7 550 aa7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 TERTO14746 1132 aaKnown RBP7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 IKBKBO14920 756 aa7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 ZNF202O95125 648 aa7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 SCG2P13521 617 aa7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 RASA1P20936 1047 aa7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 RXRBP28702 533 aa7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 GUCY1A2P33402 732 aa7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 SYKP43405 635 aa7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 TERF1P54274 439 aa7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 TFAP4Q01664 338 aa7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 CLN3Q13286 438 aa7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 ORC2Q13416 577 aaPredicted RBP7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 IQCB1Q15051 598 aa7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 ZRSR1Q15695 479 aaKnown RBP7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 CAMK4Q16566 473 aa7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.66□□□□□ -1.183e-8■■■■□ 25.8
CTNNA1-228ENST00000521640 PLA2G4DQ86XP0 818 aa7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 CKAP2LQ8IYA6 745 aa7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 TEX11Q8IYF3 940 aa7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 TRIML1Q8N9V2 468 aa7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 CCDC148Q8NFR7 591 aa7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 MRFAP1L1Q96HT8 127 aa7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 SDF4Q9BRK5 362 aa7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 SPZ1Q9BXG8 430 aa7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 ZC3H12CQ9C0D7 883 aaKnown RBP7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 EHD4Q9H223 541 aa7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 MKNK2Q9HBH9 465 aa7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 FAM13BQ9NYF5 915 aa7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 NXF1Q9UBU9 619 aaKnown RBP7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 FBXO2Q9UK22 296 aaPredicted RBP7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 PSME4Q14997 1843 aa7.66□□□□□ -1.18
CTNNA1-228ENST00000521640 A0A1B0GVL5 298 aa7.65□□□□□ -1.18
CTNNA1-228ENST00000521640 PALM3A6NDB9 673 aaPredicted RBP7.65□□□□□ -1.18
CTNNA1-228ENST00000521640 PRDM1O75626 825 aa7.65□□□□□ -1.18
CTNNA1-228ENST00000521640 WDHD1O75717 1129 aaPredicted RBP7.65□□□□□ -1.18
CTNNA1-228ENST00000521640 GNRH1P01148 92 aa7.65□□□□□ -1.18
CTNNA1-228ENST00000521640 PTMAP06454 111 aaKnown RBP7.65□□□□□ -1.18
CTNNA1-228ENST00000521640 MMP10P09238 476 aa7.65□□□□□ -1.18
CTNNA1-228ENST00000521640 TSPY3P0CV98 308 aa7.65□□□□□ -1.18
CTNNA1-228ENST00000521640 TSPY8P0CW00 308 aa7.65□□□□□ -1.18
CTNNA1-228ENST00000521640 CYP2D6P10635 497 aa7.65□□□□□ -1.18
CTNNA1-228ENST00000521640 TOP1P11387 765 aaKnown RBP7.65□□□□□ -1.18
CTNNA1-228ENST00000521640 TOB1P50616 345 aaPredicted RBP7.65□□□□□ -1.18
CTNNA1-228ENST00000521640 RNF144AP50876 292 aaPredicted RBP7.65□□□□□ -1.18
CTNNA1-228ENST00000521640 NLRP12P59046 1061 aa7.65□□□□□ -1.18
CTNNA1-228ENST00000521640 TPM4P67936 248 aa7.65□□□□□ -1.18
CTNNA1-228ENST00000521640 GABPAQ06546 454 aa7.65□□□□□ -1.18
CTNNA1-228ENST00000521640 NCOA4Q13772 614 aa7.65□□□□□ -1.18
CTNNA1-228ENST00000521640 NPY5RQ15761 445 aa7.65□□□□□ -1.18
CTNNA1-228ENST00000521640 ARL6IP4Q66PJ3 421 aaKnown RBP7.65□□□□□ -1.18
CTNNA1-228ENST00000521640 SHC4Q6S5L8 630 aa7.65□□□□□ -1.18
CTNNA1-228ENST00000521640 DPP8Q6V1X1 898 aaPredicted RBP7.65□□□□□ -1.18
CTNNA1-228ENST00000521640 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.65□□□□□ -1.18
CTNNA1-228ENST00000521640 SRBD1Q8N5C6 995 aaKnown RBP7.65□□□□□ -1.18
CTNNA1-228ENST00000521640 SUPT20HQ8NEM7 779 aa7.65□□□□□ -1.18
CTNNA1-228ENST00000521640 CCDC12Q8WUD4 166 aaPredicted RBP7.65□□□□□ -1.18
CTNNA1-228ENST00000521640 TGFBRAP1Q8WUH2 860 aa7.65□□□□□ -1.18
CTNNA1-228ENST00000521640 CNKSR1Q969H4 720 aa7.65□□□□□ -1.18
CTNNA1-228ENST00000521640 DNAJC25Q9H1X3 360 aa7.65□□□□□ -1.18
CTNNA1-228ENST00000521640 ETNK1Q9HBU6 452 aa7.65□□□□□ -1.18
CTNNA1-228ENST00000521640 IL17RBQ9NRM6 502 aa7.65□□□□□ -1.18
CTNNA1-228ENST00000521640 GJB4Q9NTQ9 266 aa7.65□□□□□ -1.18
CTNNA1-228ENST00000521640 DAGLAQ9Y4D2 1042 aa7.65□□□□□ -1.18
CTNNA1-228ENST00000521640 HRH3Q9Y5N1 445 aa7.65□□□□□ -1.18
CTNNA1-228ENST00000521640 MYH8P13535 1937 aa7.64□□□□□ -1.19
CTNNA1-228ENST00000521640 ESYT2A0FGR8 921 aa7.64□□□□□ -1.19
CTNNA1-228ENST00000521640 SMTNL1A8MU46 457 aa7.64□□□□□ -1.19
CTNNA1-228ENST00000521640 LAD1O00515 517 aa7.64□□□□□ -1.19
CTNNA1-228ENST00000521640 NEMFO60524 1076 aa7.64□□□□□ -1.19
CTNNA1-228ENST00000521640 PPFIA3O75145 1194 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms