RNA–Protein interactions for RNA: ENST00000521477.5

DENND3-216, Transcript of DENN domain containing 3, human

TSL 3

Gene DENND3, Length 381 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND3-216	ENST00000521477	IWS1	Q96ST2	819 aa		13.72	□□□□□ -0.21
DENND3-216	ENST00000521477	RNF208	Q9H0X6	261 aa		13.72	□□□□□ -0.21
DENND3-216	ENST00000521477	CPVL	Q9H3G5	476 aa		13.72	□□□□□ -0.21
DENND3-216	ENST00000521477	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.72	□□□□□ -0.21
DENND3-216	ENST00000521477	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.71	□□□□□ -0.21
DENND3-216	ENST00000521477	PIK3CD	O00329	1044 aa		13.71	□□□□□ -0.21
DENND3-216	ENST00000521477	CPLX1	O14810	134 aa		13.71	□□□□□ -0.21
DENND3-216	ENST00000521477	SEPT4	O43236	478 aa		13.71	□□□□□ -0.21
DENND3-216	ENST00000521477	POLR2M	P0CAP2	368 aa		13.71	□□□□□ -0.21
DENND3-216	ENST00000521477	RXRA	P19793	462 aa		13.71	□□□□□ -0.21
DENND3-216	ENST00000521477	FUT2	Q10981	343 aa		13.71	□□□□□ -0.21
DENND3-216	ENST00000521477	BAAT	Q14032	418 aa	Predicted RBP	13.71	□□□□□ -0.21
DENND3-216	ENST00000521477	CCL14	Q16627	93 aa		13.71	□□□□□ -0.21
DENND3-216	ENST00000521477	SLC35G1	Q2M3R5	365 aa		13.71	□□□□□ -0.21
DENND3-216	ENST00000521477	CCDC144CP	Q8IYA2	1237 aa		13.71	□□□□□ -0.21
DENND3-216	ENST00000521477	NSUN6	Q8TEA1	469 aa	Known RBP	13.71	□□□□□ -0.21
DENND3-216	ENST00000521477	VTA1	Q9NP79	307 aa		13.71	□□□□□ -0.21
DENND3-216	ENST00000521477	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.71	□□□□□ -0.21
DENND3-216	ENST00000521477	FLRT1	Q9NZU1	646 aa		13.71	□□□□□ -0.21
DENND3-216	ENST00000521477	PRPF3	O43395	683 aa	Known RBP	13.7	□□□□□ -0.22
DENND3-216	ENST00000521477	ST18	O60284	1047 aa		13.7	□□□□□ -0.22
DENND3-216	ENST00000521477	PPP1R11	O60927	126 aa	Predicted RBP	13.7	□□□□□ -0.22
DENND3-216	ENST00000521477	AKR1A1	P14550	325 aa		13.7	□□□□□ -0.22
DENND3-216	ENST00000521477	CDC27	P30260	824 aa		13.7	□□□□□ -0.22
DENND3-216	ENST00000521477	ALDH5A1	P51649	535 aa	Predicted RBP	13.7	□□□□□ -0.22
DENND3-216	ENST00000521477	NEK4	P51957	841 aa		13.7	□□□□□ -0.22
DENND3-216	ENST00000521477	IFFO2	Q5TF58	517 aa		13.7	□□□□□ -0.22
DENND3-216	ENST00000521477	ARMCX2	Q7L311	632 aa		13.7	□□□□□ -0.22
DENND3-216	ENST00000521477	CCDC148	Q8NFR7	591 aa		13.7	□□□□□ -0.22
DENND3-216	ENST00000521477	FGD4	Q96M96	766 aa		13.7	□□□□□ -0.22
DENND3-216	ENST00000521477	TBC1D32	Q96NH3	1257 aa		13.7	□□□□□ -0.22
DENND3-216	ENST00000521477	BACH2	Q9BYV9	841 aa		13.7	□□□□□ -0.22
DENND3-216	ENST00000521477	CRISPLD2	Q9H0B8	497 aa		13.7	□□□□□ -0.22
DENND3-216	ENST00000521477	UNC93B1	Q9H1C4	597 aa		13.7	□□□□□ -0.22
DENND3-216	ENST00000521477	SLK	Q9H2G2	1235 aa	Predicted RBP	13.7	□□□□□ -0.22
DENND3-216	ENST00000521477	EHMT1	Q9H9B1	1298 aa		13.7	□□□□□ -0.22
DENND3-216	ENST00000521477	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.7	□□□□□ -0.22
DENND3-216	ENST00000521477	BAZ2B	Q9UIF8	2168 aa	Known RBP	13.69	□□□□□ -0.22
DENND3-216	ENST00000521477	STK36	Q9NRP7	1315 aa		13.69	□□□□□ -0.22
DENND3-216	ENST00000521477	LCT	P09848	1927 aa		13.69	□□□□□ -0.22
DENND3-216	ENST00000521477	ESYT2	A0FGR8	921 aa		13.69	□□□□□ -0.22
DENND3-216	ENST00000521477	PFKFB2	O60825	505 aa		13.69	□□□□□ -0.22
DENND3-216	ENST00000521477	STAM2	O75886	525 aa		13.69	□□□□□ -0.22
DENND3-216	ENST00000521477	SGPL1	O95470	568 aa		13.69	□□□□□ -0.22
DENND3-216	ENST00000521477	EDNRB	P24530	442 aa		13.69	□□□□□ -0.22
DENND3-216	ENST00000521477	CYP2C19	P33261	490 aa		13.69	□□□□□ -0.22
DENND3-216	ENST00000521477	MCM2	P49736	904 aa		13.69	□□□□□ -0.22
DENND3-216	ENST00000521477	RGS19	P49795	217 aa		13.69	□□□□□ -0.22
DENND3-216	ENST00000521477	AK2	P54819	239 aa		13.69	□□□□□ -0.22
DENND3-216	ENST00000521477	MTFR1	Q15390	333 aa		13.69	□□□□□ -0.22
DENND3-216	ENST00000521477	PFKFB3	Q16875	520 aa	Predicted RBP	13.69	□□□□□ -0.22
DENND3-216	ENST00000521477	XRRA1	Q6P2D8	792 aa		13.69	□□□□□ -0.22
DENND3-216	ENST00000521477	SLC30A10	Q6XR72	485 aa		13.69	□□□□□ -0.22
DENND3-216	ENST00000521477	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.69	□□□□□ -0.22
DENND3-216	ENST00000521477	U2AF1L4	Q8WU68	220 aa	Known RBP	13.69	□□□□□ -0.22
DENND3-216	ENST00000521477	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.69	□□□□□ -0.22
DENND3-216	ENST00000521477	SH3GLB2	Q9NR46	395 aa		13.69	□□□□□ -0.22
DENND3-216	ENST00000521477	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.69	□□□□□ -0.22
DENND3-216	ENST00000521477	BARHL2	Q9NY43	387 aa		13.69	□□□□□ -0.22
DENND3-216	ENST00000521477	DDX20	Q9UHI6	824 aa	Known RBP	13.69	□□□□□ -0.22
DENND3-216	ENST00000521477	FAM184B	Q9ULE4	1060 aa		13.69	□□□□□ -0.22
DENND3-216	ENST00000521477	SMCHD1	A6NHR9	2005 aa		13.69	□□□□□ -0.22
DENND3-216	ENST00000521477	CENPF	P49454	3210 aa		13.69	□□□□□ -0.22
DENND3-216	ENST00000521477	KIAA0100	Q14667	2235 aa	Known RBP	13.68	□□□□□ -0.22
DENND3-216	ENST00000521477	FRMPD4	Q14CM0	1322 aa		13.68	□□□□□ -0.22
DENND3-216	ENST00000521477	LRRC37A2	A6NM11	1700 aa		13.68	□□□□□ -0.22
DENND3-216	ENST00000521477	SOWAHB	A6NEL2	793 aa		13.68	□□□□□ -0.22
DENND3-216	ENST00000521477	DEXI	O95424	95 aa		13.68	□□□□□ -0.22
DENND3-216	ENST00000521477	CFB	P00751	764 aa		13.68	□□□□□ -0.22
DENND3-216	ENST00000521477	SCG2	P13521	617 aa		13.68	□□□□□ -0.22
DENND3-216	ENST00000521477	CALML3	P27482	149 aa		13.68	□□□□□ -0.22
DENND3-216	ENST00000521477	ADD1	P35611	737 aa	Known RBP	13.68	□□□□□ -0.22
DENND3-216	ENST00000521477	CNTN2	Q02246	1040 aa		13.68	□□□□□ -0.22
DENND3-216	ENST00000521477	ACVR2B	Q13705	512 aa		13.68	□□□□□ -0.22
DENND3-216	ENST00000521477	NTRK3	Q16288	839 aa		13.68	□□□□□ -0.22
DENND3-216	ENST00000521477	BICD2	Q8TD16	824 aa		13.68	□□□□□ -0.22
DENND3-216	ENST00000521477	WASF1	Q92558	559 aa		13.68	□□□□□ -0.22
DENND3-216	ENST00000521477	OGDHL	Q9ULD0	1010 aa		13.68	□□□□□ -0.22
DENND3-216	ENST00000521477	LIMCH1	Q9UPQ0	1083 aa		13.68	□□□□□ -0.22
DENND3-216	ENST00000521477	OPLAH	O14841	1288 aa		13.67	□□□□□ -0.22
DENND3-216	ENST00000521477	NKRF	O15226	690 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
DENND3-216	ENST00000521477	SNAI1	O95863	264 aa	Predicted RBP	13.67	□□□□□ -0.22
DENND3-216	ENST00000521477	FOS	P01100	380 aa	Predicted RBP	13.67	□□□□□ -0.22
DENND3-216	ENST00000521477	ZNF865	P0CJ78	1059 aa	Predicted RBP	13.67	□□□□□ -0.22
DENND3-216	ENST00000521477	RARB	P10826	455 aa		13.67	□□□□□ -0.22
DENND3-216	ENST00000521477	XBP1	P17861	261 aa		13.67	□□□□□ -0.22
DENND3-216	ENST00000521477	GNA11	P29992	359 aa		13.67	□□□□□ -0.22
DENND3-216	ENST00000521477	NAPA	P54920	295 aa		13.67	□□□□□ -0.22
DENND3-216	ENST00000521477	PDE4D	Q08499	809 aa		13.67	□□□□□ -0.22
DENND3-216	ENST00000521477	SSRP1	Q08945	709 aa	Known RBP	13.67	□□□□□ -0.22
DENND3-216	ENST00000521477	AP3B2	Q13367	1082 aa		13.67	□□□□□ -0.22
DENND3-216	ENST00000521477	ARHGEF16	Q5VV41	709 aa		13.67	□□□□□ -0.22
DENND3-216	ENST00000521477	IQSEC1	Q6DN90	963 aa		13.67	□□□□□ -0.22
DENND3-216	ENST00000521477	GALNT17	Q6IS24	598 aa		13.67	□□□□□ -0.22
DENND3-216	ENST00000521477	KCNV1	Q6PIU1	500 aa		13.67	□□□□□ -0.22
DENND3-216	ENST00000521477	HEATR3	Q7Z4Q2	680 aa		13.67	□□□□□ -0.22
DENND3-216	ENST00000521477	RAB11FIP4	Q86YS3	637 aa		13.67	□□□□□ -0.22
DENND3-216	ENST00000521477	DEFB118	Q96PH6	123 aa		13.67	□□□□□ -0.22
DENND3-216	ENST00000521477	RMDN3	Q96TC7	470 aa		13.67	□□□□□ -0.22
DENND3-216	ENST00000521477	PSTPIP2	Q9H939	334 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms