RNA–Protein interactions for RNA: ENST00000521460.1

NSMCE2-209, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 5

Gene NSMCE2, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-209ENST00000521460 SPZ1Q9BXG8 430 aa9.5□□□□□ -0.89
NSMCE2-209ENST00000521460 VAT1LQ9HCJ6 419 aa9.5□□□□□ -0.89
NSMCE2-209ENST00000521460 SYNPO2Q9UMS6 1093 aa9.5□□□□□ -0.89
NSMCE2-209ENST00000521460 EYSQ5T1H1 3165 aa9.5□□□□□ -0.89
NSMCE2-209ENST00000521460 PHIPQ8WWQ0 1821 aa9.49□□□□□ -0.89
NSMCE2-209ENST00000521460 PTPRFP10586 1907 aa9.49□□□□□ -0.89
NSMCE2-209ENST00000521460 BMP3P12645 472 aa9.49□□□□□ -0.89
NSMCE2-209ENST00000521460 PDIA4P13667 645 aaKnown RBP9.49□□□□□ -0.89
NSMCE2-209ENST00000521460 SLC16A2P36021 539 aa9.49□□□□□ -0.89
NSMCE2-209ENST00000521460 GCLCP48506 637 aaPredicted RBP9.49□□□□□ -0.89
NSMCE2-209ENST00000521460 PFKFB3Q16875 520 aaPredicted RBP9.49□□□□□ -0.89
NSMCE2-209ENST00000521460 FOXD4L6Q3SYB3 417 aaPredicted RBP9.49□□□□□ -0.89
NSMCE2-209ENST00000521460 GPATCH4Q5T3I0 446 aaKnown RBP9.49□□□□□ -0.89
NSMCE2-209ENST00000521460 KRT40Q6A162 431 aa9.49□□□□□ -0.89
NSMCE2-209ENST00000521460 FOXD4L3Q6VB84 417 aaPredicted RBP9.49□□□□□ -0.89
NSMCE2-209ENST00000521460 FBXO18Q8NFZ0 1043 aa9.49□□□□□ -0.89
NSMCE2-209ENST00000521460 FEZ1Q99689 392 aa9.49□□□□□ -0.89
NSMCE2-209ENST00000521460 ASCC2Q9H1I8 757 aaPredicted RBP9.49□□□□□ -0.89
NSMCE2-209ENST00000521460 SH2D4AQ9H788 454 aa9.49□□□□□ -0.89
NSMCE2-209ENST00000521460 VCPKMTQ9H867 229 aa9.49□□□□□ -0.89
NSMCE2-209ENST00000521460 GOPCQ9HD26 462 aa9.49□□□□□ -0.89
NSMCE2-209ENST00000521460 PRDM6Q9NQX0 595 aa9.49□□□□□ -0.89
NSMCE2-209ENST00000521460 VPS54Q9P1Q0 977 aa9.49□□□□□ -0.89
NSMCE2-209ENST00000521460 PNMA3Q9UL41 463 aa9.49□□□□□ -0.89
NSMCE2-209ENST00000521460 COL6A1P12109 1028 aa9.48□□□□□ -0.89
NSMCE2-209ENST00000521460 SCG2P13521 617 aa9.48□□□□□ -0.89
NSMCE2-209ENST00000521460 SMARCA1P28370 1054 aa9.48□□□□□ -0.89
NSMCE2-209ENST00000521460 NUBP1P53384 320 aa9.48□□□□□ -0.89
NSMCE2-209ENST00000521460 HMGCS2P54868 508 aa9.48□□□□□ -0.89
NSMCE2-209ENST00000521460 CACNB2Q08289 660 aaPredicted RBP9.48□□□□□ -0.89
NSMCE2-209ENST00000521460 RESTQ13127 1097 aa9.48□□□□□ -0.89
NSMCE2-209ENST00000521460 MTMR2Q13614 643 aa9.48□□□□□ -0.89
NSMCE2-209ENST00000521460 TRIM29Q14134 588 aa9.48□□□□□ -0.89
NSMCE2-209ENST00000521460 FAM83BQ5T0W9 1011 aa9.48□□□□□ -0.89
NSMCE2-209ENST00000521460 MAP3K21Q5TCX8 1036 aa9.48□□□□□ -0.89
NSMCE2-209ENST00000521460 MCTP1Q6DN14 999 aa9.48□□□□□ -0.89
NSMCE2-209ENST00000521460 HOMER1Q86YM7 354 aa9.48□□□□□ -0.89
NSMCE2-209ENST00000521460 ADGRF4Q8IZF3 695 aa9.48□□□□□ -0.89
NSMCE2-209ENST00000521460 PROCA1Q8NCQ7 364 aaPredicted RBP9.48□□□□□ -0.89
NSMCE2-209ENST00000521460 GPKOWQ92917 476 aaPredicted RBP eCLIP9.48□□□□□ -0.89
NSMCE2-209ENST00000521460 RRP36Q96EU6 259 aaKnown RBP9.48□□□□□ -0.89
NSMCE2-209ENST00000521460 PIGSQ96S52 555 aa9.48□□□□□ -0.89
NSMCE2-209ENST00000521460 CDX2Q99626 313 aaPredicted RBP9.48□□□□□ -0.89
NSMCE2-209ENST00000521460 WDR18Q9BV38 432 aa9.48□□□□□ -0.89
NSMCE2-209ENST00000521460 RIOX1Q9H6W3 641 aa9.48□□□□□ -0.89
NSMCE2-209ENST00000521460 AS3MTQ9HBK9 375 aa9.48□□□□□ -0.89
NSMCE2-209ENST00000521460 KCNJ14Q9UNX9 436 aa9.48□□□□□ -0.89
NSMCE2-209ENST00000521460 KIF28PB7ZC32 967 aa9.47□□□□□ -0.89
NSMCE2-209ENST00000521460 USP17L10C9JJH3 530 aa9.47□□□□□ -0.89
NSMCE2-209ENST00000521460 TMEM232C9JQI7 657 aa9.47□□□□□ -0.89
NSMCE2-209ENST00000521460 BAG4O95429 457 aaKnown RBP9.47□□□□□ -0.89
NSMCE2-209ENST00000521460 CCND3P30281 292 aaPredicted RBP9.47□□□□□ -0.89
NSMCE2-209ENST00000521460 IKQ13123 557 aaPredicted RBP9.47□□□□□ -0.89
NSMCE2-209ENST00000521460 PABPC4Q13310 644 aaKnown RBP eCLIP9.47□□□□□ -0.89
NSMCE2-209ENST00000521460 Q3C1V9 767 aa9.47□□□□□ -0.89
NSMCE2-209ENST00000521460 ZNF697Q5TEC3 545 aa9.47□□□□□ -0.89
NSMCE2-209ENST00000521460 WWC2Q6AWC2 1192 aa9.47□□□□□ -0.89
NSMCE2-209ENST00000521460 FAM173BQ6P4H8 233 aa9.47□□□□□ -0.89
NSMCE2-209ENST00000521460 HEATR3Q7Z4Q2 680 aa9.47□□□□□ -0.89
NSMCE2-209ENST00000521460 ZNF280CQ8ND82 737 aa9.47□□□□□ -0.89
NSMCE2-209ENST00000521460 P2RX7Q99572 595 aaKnown RBP9.47□□□□□ -0.89
NSMCE2-209ENST00000521460 NUDT12Q9BQG2 462 aa9.47□□□□□ -0.89
NSMCE2-209ENST00000521460 SENP6Q9GZR1 1112 aaPredicted RBP9.47□□□□□ -0.89
NSMCE2-209ENST00000521460 KIAA1683Q9H0B3 1180 aa9.47□□□□□ -0.89
NSMCE2-209ENST00000521460 SEMA6BQ9H3T3 888 aa9.47□□□□□ -0.89
NSMCE2-209ENST00000521460 JMJD4Q9H9V9 463 aa9.47□□□□□ -0.89
NSMCE2-209ENST00000521460 SEC63Q9UGP8 760 aaKnown RBP9.47□□□□□ -0.89
NSMCE2-209ENST00000521460 LAMA2P24043 3122 aaKnown RBP9.47□□□□□ -0.89
NSMCE2-209ENST00000521460 PLXNB2O15031 1838 aa9.47□□□□□ -0.89
NSMCE2-209ENST00000521460 STXBP3O00186 592 aa9.46□□□□□ -0.9
NSMCE2-209ENST00000521460 MMP1P03956 469 aa9.46□□□□□ -0.9
NSMCE2-209ENST00000521460 XBP1P17861 261 aa9.46□□□□□ -0.9
NSMCE2-209ENST00000521460 BACE1P56817 501 aa9.46□□□□□ -0.9
NSMCE2-209ENST00000521460 SNAP25P60880 206 aa9.46□□□□□ -0.9
NSMCE2-209ENST00000521460 NFKBIBQ15653 356 aa9.46□□□□□ -0.9
NSMCE2-209ENST00000521460 CCL14Q16627 93 aa9.46□□□□□ -0.9
NSMCE2-209ENST00000521460 SYDE2Q5VT97 1194 aa9.46□□□□□ -0.9
NSMCE2-209ENST00000521460 TYW1BQ6NUM6 668 aa9.46□□□□□ -0.9
NSMCE2-209ENST00000521460 CLEC17AQ6ZS10 378 aa9.46□□□□□ -0.9
NSMCE2-209ENST00000521460 RGS22Q8NE09 1264 aa9.46□□□□□ -0.9
NSMCE2-209ENST00000521460 MAFAQ8NHW3 353 aaPredicted RBP9.46□□□□□ -0.9
NSMCE2-209ENST00000521460 MTMR8Q96EF0 704 aa9.46□□□□□ -0.9
NSMCE2-209ENST00000521460 GBP4Q96PP9 640 aa9.46□□□□□ -0.9
NSMCE2-209ENST00000521460 LBHD1Q9BQE6 289 aaPredicted RBP9.46□□□□□ -0.9
NSMCE2-209ENST00000521460 PHF20Q9BVI0 1012 aa9.46□□□□□ -0.9
NSMCE2-209ENST00000521460 EMILIN3Q9NT22 766 aa9.46□□□□□ -0.9
NSMCE2-209ENST00000521460 MORF4L1Q9UBU8 362 aa9.46□□□□□ -0.9
NSMCE2-209ENST00000521460 DOCK1Q14185 1865 aa9.46□□□□□ -0.9
NSMCE2-209ENST00000521460 MYH4Q9Y623 1939 aa9.46□□□□□ -0.9
NSMCE2-209ENST00000521460 CUL9Q8IWT3 2517 aa9.46□□□□□ -0.9
NSMCE2-209ENST00000521460 PNMA6FA0A0J9YX94 578 aa9.45□□□□□ -0.9
NSMCE2-209ENST00000521460 BTBD18B2RXH4 712 aa9.45□□□□□ -0.9
NSMCE2-209ENST00000521460 ZBTB5O15062 677 aa9.45□□□□□ -0.9
NSMCE2-209ENST00000521460 WDR46O15213 610 aaKnown RBP9.45□□□□□ -0.9
NSMCE2-209ENST00000521460 PPP1R11O60927 126 aaPredicted RBP9.45□□□□□ -0.9
NSMCE2-209ENST00000521460 VCAM1P19320 739 aa9.45□□□□□ -0.9
NSMCE2-209ENST00000521460 MCM4P33991 863 aa9.45□□□□□ -0.9
NSMCE2-209ENST00000521460 STAT2P52630 851 aa9.45□□□□□ -0.9
NSMCE2-209ENST00000521460 USP14P54578 494 aa9.45□□□□□ -0.9
NSMCE2-209ENST00000521460 NLRP5P59047 1200 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms