RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 PPIGQ13427 754 aaKnown RBP eCLIP23.06■■□□□ 1.28
PABPC1-215ENST00000520804 GPATCH4Q5T3I0 446 aaKnown RBP23.06■■□□□ 1.28
PABPC1-215ENST00000520804 RNF207Q6ZRF8 634 aa23.06■■□□□ 1.28
PABPC1-215ENST00000520804 CALML3P27482 149 aa23.05■■□□□ 1.28
PABPC1-215ENST00000520804 ITGA7Q13683 1181 aa23.05■■□□□ 1.28
PABPC1-215ENST00000520804 DUSP28Q4G0W2 176 aa23.05■■□□□ 1.28
PABPC1-215ENST00000520804 IQCA1Q86XH1 822 aa23.05■■□□□ 1.28
PABPC1-215ENST00000520804 TMEM199Q8N511 208 aa23.05■■□□□ 1.28
PABPC1-215ENST00000520804 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.05■■□□□ 1.28
PABPC1-215ENST00000520804 DSCC1Q9BVC3 393 aa23.05■■□□□ 1.28
PABPC1-215ENST00000520804 SEZ6LQ9BYH1 1024 aa23.05■■□□□ 1.28
PABPC1-215ENST00000520804 PPP1R12CQ9BZL4 782 aa23.05■■□□□ 1.28
PABPC1-215ENST00000520804 GRIN2DO15399 1336 aa23.05■■□□□ 1.28
PABPC1-215ENST00000520804 TMEM265A0A087WTH1 108 aa23.04■■□□□ 1.28
PABPC1-215ENST00000520804 KDM4AO75164 1064 aa23.04■■□□□ 1.28
PABPC1-215ENST00000520804 GOLGA8HP0CJ92 632 aa23.04■■□□□ 1.28
PABPC1-215ENST00000520804 CSF2RAP15509 400 aa23.04■■□□□ 1.28
PABPC1-215ENST00000520804 RPS6P62753 249 aaKnown RBP23.04■■□□□ 1.28
PABPC1-215ENST00000520804 CCDC178Q5BJE1 867 aa23.04■■□□□ 1.28
PABPC1-215ENST00000520804 C16orf59Q7L2K0 433 aa23.04■■□□□ 1.28
PABPC1-215ENST00000520804 ANKS1AQ92625 1134 aa23.04■■□□□ 1.28
PABPC1-215ENST00000520804 WDR11Q9BZH6 1224 aa23.04■■□□□ 1.28
PABPC1-215ENST00000520804 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.03■■□□□ 1.28
PABPC1-215ENST00000520804 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.03■■□□□ 1.28
PABPC1-215ENST00000520804 RBM47A0AV96 593 aaKnown RBP23.03■■□□□ 1.28
PABPC1-215ENST00000520804 TMEM240Q5SV17 173 aa23.03■■□□□ 1.28
PABPC1-215ENST00000520804 PNMA1Q8ND90 353 aa23.03■■□□□ 1.28
PABPC1-215ENST00000520804 B4E1Z4 1266 aa23.02■■□□□ 1.28
PABPC1-215ENST00000520804 CYP2C18P33260 490 aa23.02■■□□□ 1.28
PABPC1-215ENST00000520804 IMMTQ16891 758 aaKnown RBP23.02■■□□□ 1.28
PABPC1-215ENST00000520804 ZSCAN10Q96SZ4 725 aaPredicted RBP23.02■■□□□ 1.28
PABPC1-215ENST00000520804 UBA5Q9GZZ9 404 aa23.02■■□□□ 1.28
PABPC1-215ENST00000520804 CPVLQ9H3G5 476 aa23.02■■□□□ 1.28
PABPC1-215ENST00000520804 KAT14Q9H8E8 782 aa23.02■■□□□ 1.28
PABPC1-215ENST00000520804 EDNRBP24530 442 aa23.01■■□□□ 1.27
PABPC1-215ENST00000520804 PSMC6P62333 389 aa23.01■■□□□ 1.27
PABPC1-215ENST00000520804 RASIP1Q5U651 963 aa23.01■■□□□ 1.27
PABPC1-215ENST00000520804 RGS22Q8NE09 1264 aa23.01■■□□□ 1.27
PABPC1-215ENST00000520804 DNERQ8NFT8 737 aa23.01■■□□□ 1.27
PABPC1-215ENST00000520804 MPHOSPH6Q99547 160 aaKnown RBP23.01■■□□□ 1.27
PABPC1-215ENST00000520804 ZSWIM5Q9P217 1185 aa23.01■■□□□ 1.27
PABPC1-215ENST00000520804 CTNNA3Q9UI47 895 aa23.01■■□□□ 1.27
PABPC1-215ENST00000520804 ACRP10323 421 aa23■■□□□ 1.27
PABPC1-215ENST00000520804 PDE4DQ08499 809 aa23■■□□□ 1.27
PABPC1-215ENST00000520804 USH1GQ495M9 461 aa23■■□□□ 1.27
PABPC1-215ENST00000520804 PSRC1Q6PGN9 363 aaPredicted RBP23■■□□□ 1.27
PABPC1-215ENST00000520804 ENAHQ8N8S7 591 aaPredicted RBP23■■□□□ 1.27
PABPC1-215ENST00000520804 MYLIPQ8WY64 445 aa23■■□□□ 1.27
PABPC1-215ENST00000520804 TRPV6Q9H1D0 765 aa23■■□□□ 1.27
PABPC1-215ENST00000520804 HIPK3Q9H422 1215 aa23■■□□□ 1.27
PABPC1-215ENST00000520804 POLR3EQ9NVU0 708 aa23■■□□□ 1.27
PABPC1-215ENST00000520804 B4GALT4O60513 344 aa22.99■■□□□ 1.27
PABPC1-215ENST00000520804 DNAJB2P25686 324 aa22.99■■□□□ 1.27
PABPC1-215ENST00000520804 CPT1AP50416 773 aa22.99■■□□□ 1.27
PABPC1-215ENST00000520804 CDC37Q16543 378 aaPredicted RBP22.99■■□□□ 1.27
PABPC1-215ENST00000520804 ASPRV1Q53RT3 343 aa22.99■■□□□ 1.27
PABPC1-215ENST00000520804 ZNF365Q70YC5 407 aa22.99■■□□□ 1.27
PABPC1-215ENST00000520804 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.99■■□□□ 1.27
PABPC1-215ENST00000520804 OR6J1Q8NGC5 347 aa22.99■■□□□ 1.27
PABPC1-215ENST00000520804 KRT23Q9C075 422 aa22.99■■□□□ 1.27
PABPC1-215ENST00000520804 IL23AQ9NPF7 189 aa22.99■■□□□ 1.27
PABPC1-215ENST00000520804 TNKSO95271 1327 aa22.99■■□□□ 1.27
PABPC1-215ENST00000520804 CDH23Q9H251 3354 aa22.99■■□□□ 1.27
PABPC1-215ENST00000520804 ADGRF4Q8IZF3 695 aa22.98■■□□□ 1.27
PABPC1-215ENST00000520804 SCFD2Q8WU76 684 aa22.98■■□□□ 1.27
PABPC1-215ENST00000520804 NOC4LQ9BVI4 516 aaKnown RBP22.98■■□□□ 1.27
PABPC1-215ENST00000520804 MAF1Q9H063 256 aa22.98■■□□□ 1.27
PABPC1-215ENST00000520804 IL25Q9H293 177 aa22.98■■□□□ 1.27
PABPC1-215ENST00000520804 CNNM2Q9H8M5 875 aa22.98■■□□□ 1.27
PABPC1-215ENST00000520804 ABCB11O95342 1321 aa22.98■■□□□ 1.27
PABPC1-215ENST00000520804 UMODL1Q5DID0 1318 aa22.98■■□□□ 1.27
PABPC1-215ENST00000520804 B4DLN1 442 aa22.97■■□□□ 1.27
PABPC1-215ENST00000520804 NKRFO15226 690 aaKnown RBP eCLIP22.97■■□□□ 1.27
PABPC1-215ENST00000520804 MRPL12P52815 198 aaKnown RBP22.97■■□□□ 1.27
PABPC1-215ENST00000520804 PURAQ00577 322 aaKnown RBP22.97■■□□□ 1.27
PABPC1-215ENST00000520804 PPP2R5BQ15173 497 aa22.97■■□□□ 1.27
PABPC1-215ENST00000520804 MAFAQ8NHW3 353 aaPredicted RBP22.97■■□□□ 1.27
PABPC1-215ENST00000520804 TIFAQ96CG3 184 aa22.97■■□□□ 1.27
PABPC1-215ENST00000520804 ALDH8A1Q9H2A2 487 aaPredicted RBP22.97■■□□□ 1.27
PABPC1-215ENST00000520804 MYL3P08590 195 aa22.96■■□□□ 1.27
PABPC1-215ENST00000520804 FOSL2P15408 326 aa22.96■■□□□ 1.27
PABPC1-215ENST00000520804 PDE4AP27815 886 aa22.96■■□□□ 1.27
PABPC1-215ENST00000520804 HERVK_113Q902F9 699 aa22.96■■□□□ 1.27
PABPC1-215ENST00000520804 UBAC1Q9BSL1 405 aa22.96■■□□□ 1.27
PABPC1-215ENST00000520804 MTG1Q9BT17 334 aaPredicted RBP22.96■■□□□ 1.27
PABPC1-215ENST00000520804 UNC80Q8N2C7 3258 aa22.95■■□□□ 1.27
PABPC1-215ENST00000520804 A0A0C4DFX4 3053 aa22.95■■□□□ 1.26
PABPC1-215ENST00000520804 PARP1P09874 1014 aaKnown RBP22.95■■□□□ 1.26
PABPC1-215ENST00000520804 GSPT1P15170 499 aaKnown RBP22.95■■□□□ 1.26
PABPC1-215ENST00000520804 CCL23P55773 120 aa22.95■■□□□ 1.26
PABPC1-215ENST00000520804 GRIN2CQ14957 1233 aa22.95■■□□□ 1.26
PABPC1-215ENST00000520804 QRICH1Q2TAL8 776 aa22.95■■□□□ 1.26
PABPC1-215ENST00000520804 BRDTQ58F21 947 aaPredicted RBP22.95■■□□□ 1.26
PABPC1-215ENST00000520804 TBC1D5Q92609 795 aa22.95■■□□□ 1.26
PABPC1-215ENST00000520804 RAD50Q92878 1312 aa22.95■■□□□ 1.26
PABPC1-215ENST00000520804 WNT8AQ9H1J5 351 aa22.95■■□□□ 1.26
PABPC1-215ENST00000520804 GPHNQ9NQX3 736 aaPredicted RBP22.95■■□□□ 1.26
PABPC1-215ENST00000520804 SUPT16HQ9Y5B9 1047 aaKnown RBP22.95■■□□□ 1.26
PABPC1-215ENST00000520804 A6NJR5 290 aa22.94■■□□□ 1.26
PABPC1-215ENST00000520804 GRXCR1A8MXD5 290 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms