RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 GPCPD1Q9NPB8 672 aa6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 SH2B1Q9NRF2 756 aaPredicted RBP6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 IL17RBQ9NRM6 502 aa6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 RNF146Q9NTX7 359 aa6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 TSKSQ9UJT2 592 aa6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 PRR12Q9ULL5 1215 aa6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 ADAMTS5Q9UNA0 930 aa6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 PTPN22Q9Y2R2 807 aa6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 SNX14Q9Y5W7 946 aa6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 FRMPD2Q68DX3 1309 aaPredicted RBP6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 ADGRA2Q96PE1 1338 aa6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 PTPRFP10586 1907 aa6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 GREB1LQ9C091 1923 aaPredicted RBP6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 PTPDC1A2A3K4 754 aa6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 ZEB2O60315 1214 aa6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 NMT2O60551 498 aa6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 STAM2O75886 525 aa6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 FOSP01100 380 aaPredicted RBP6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 PTPREP23469 700 aa6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 CALML3P27482 149 aa6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 FLT3LGP49771 235 aa6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 ZNF445P59923 1031 aa6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 GRB14Q14449 540 aa6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 SEC23AQ15436 765 aa6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 GNPTABQ3T906 1256 aa6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 ARSIQ5FYB1 569 aa6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 GALNT17Q6IS24 598 aa6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 XRRA1Q6P2D8 792 aa6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 CCDC174Q6PII3 467 aa6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 KCNV1Q6PIU1 500 aa6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 APOA5Q6Q788 366 aa6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 TMEM92Q6UXU6 159 aa6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 Q6ZNB5 142 aa6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 RNF207Q6ZRF8 634 aa6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 Q6ZUG5 572 aa6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 CLEC10AQ8IUN9 316 aa6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 SMARCC2Q8TAQ2 1214 aa6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 IGDCC4Q8TDY8 1250 aa6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 BRF1Q92994 677 aa6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 CDHR1Q96JP9 859 aa6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 NUP88Q99567 741 aaPredicted RBP6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 NAP1L4Q99733 375 aaKnown RBP6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 MOV10L1Q9BXT6 1211 aaKnown RBP6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 NBPF3Q9H094 633 aa6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 ALDH8A1Q9H2A2 487 aaPredicted RBP6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 HMX1Q9NP08 348 aaPredicted RBP6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 RBPJLQ9UBG7 517 aa6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 PCDHA1Q9Y5I3 950 aa6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 SYNGAP1Q96PV0 1343 aa6.48□□□□□ -1.37
CTNNA1-220ENST00000520260 CEP350Q5VT06 3117 aa6.47□□□□□ -1.37
CTNNA1-220ENST00000520260 PALM3A6NDB9 673 aaPredicted RBP6.47□□□□□ -1.37
CTNNA1-220ENST00000520260 SPDYE3A6NKU9 549 aa6.47□□□□□ -1.37
CTNNA1-220ENST00000520260 GCOM1H8Y6P7 765 aaPredicted RBP6.47□□□□□ -1.37
CTNNA1-220ENST00000520260 ZNF500O60304 480 aaPredicted RBP6.47□□□□□ -1.37
CTNNA1-220ENST00000520260 POLR2MP0CAP2 368 aa6.47□□□□□ -1.37
CTNNA1-220ENST00000520260 ADORA2AP29274 412 aa6.47□□□□□ -1.37
CTNNA1-220ENST00000520260 NEK4P51957 841 aa6.47□□□□□ -1.37
CTNNA1-220ENST00000520260 JAG1P78504 1218 aa6.47□□□□□ -1.37
CTNNA1-220ENST00000520260 HMGN5P82970 282 aaKnown RBP6.47□□□□□ -1.37
CTNNA1-220ENST00000520260 PRKCZQ05513 592 aa6.47□□□□□ -1.37
CTNNA1-220ENST00000520260 PDE4DQ08499 809 aa6.47□□□□□ -1.37
CTNNA1-220ENST00000520260 SSRP1Q08945 709 aaKnown RBP6.47□□□□□ -1.37
CTNNA1-220ENST00000520260 TROAPQ12815 778 aa6.47□□□□□ -1.37
CTNNA1-220ENST00000520260 TMEM132BQ14DG7 1078 aa6.47□□□□□ -1.37
CTNNA1-220ENST00000520260 SAFBQ15424 915 aaKnown RBP eCLIP6.47□□□□□ -1.37
CTNNA1-220ENST00000520260 KLHL40Q2TBA0 621 aa6.47□□□□□ -1.37
CTNNA1-220ENST00000520260 NSMFQ6X4W1 530 aa6.47□□□□□ -1.37
CTNNA1-220ENST00000520260 CYB5R4Q7L1T6 521 aa6.47□□□□□ -1.37
CTNNA1-220ENST00000520260 HOMER1Q86YM7 354 aa6.47□□□□□ -1.37
CTNNA1-220ENST00000520260 SIAH1Q8IUQ4 282 aa6.47□□□□□ -1.37
CTNNA1-220ENST00000520260 ADGRF4Q8IZF3 695 aa6.47□□□□□ -1.37
CTNNA1-220ENST00000520260 ARRDC4Q8NCT1 418 aa6.47□□□□□ -1.37
CTNNA1-220ENST00000520260 GIMAP8Q8ND71 665 aaPredicted RBP6.47□□□□□ -1.37
CTNNA1-220ENST00000520260 NSUN6Q8TEA1 469 aaKnown RBP6.47□□□□□ -1.37
CTNNA1-220ENST00000520260 IWS1Q96ST2 819 aa6.47□□□□□ -1.37
CTNNA1-220ENST00000520260 RNF26Q9BY78 433 aaPredicted RBP6.47□□□□□ -1.37
CTNNA1-220ENST00000520260 SEZ6LQ9BYH1 1024 aa6.47□□□□□ -1.37
CTNNA1-220ENST00000520260 MCOLN1Q9GZU1 580 aa6.47□□□□□ -1.37
CTNNA1-220ENST00000520260 RAVER2Q9HCJ3 691 aaKnown RBP6.47□□□□□ -1.37
CTNNA1-220ENST00000520260 C6orf50Q9HD87 102 aa6.47□□□□□ -1.37
CTNNA1-220ENST00000520260 HOMER2Q9NSB8 354 aa6.47□□□□□ -1.37
CTNNA1-220ENST00000520260 ZNF214Q9UL59 606 aaPredicted RBP6.47□□□□□ -1.37
CTNNA1-220ENST00000520260 CASP8AP2Q9UKL3 1982 aa6.47□□□□□ -1.37
CTNNA1-220ENST00000520260 RPTORQ8N122 1335 aa6.47□□□□□ -1.37
CTNNA1-220ENST00000520260 ZNF236Q9UL36 1845 aa6.46□□□□□ -1.37
CTNNA1-220ENST00000520260 KBTBD13C9JR72 458 aa6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 GOLGA6L22H0YM25 854 aa6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 NKRFO15226 690 aaKnown RBP eCLIP6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 DEXIO95424 95 aa6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 GOLGA8HP0CJ92 632 aa6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 RARBP10826 455 aa6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 CYP2B6P20813 491 aa6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 CNGA1P29973 690 aa6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 PBX2P40425 430 aa6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 NASPP49321 788 aaPredicted RBP6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 ADCY7P51828 1080 aa6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 NAPAP54920 295 aa6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 EXOSC10Q01780 885 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms