RNA–Protein interactions for RNA: ENST00000520119.1

IGHV1-17-201, Transcript of immunoglobulin heavy variable 1-17 (pseudogene), humanhuman

BASIC

Gene IGHV1-17, Length 334 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV1-17-201ENST00000520119 CCDC171Q6TFL3 1326 aa13□□□□□ -0.33
IGHV1-17-201ENST00000520119 MYADML2A6NDP7 307 aa13□□□□□ -0.33
IGHV1-17-201ENST00000520119 SOWAHBA6NEL2 793 aa13□□□□□ -0.33
IGHV1-17-201ENST00000520119 ADCY6O43306 1168 aa13□□□□□ -0.33
IGHV1-17-201ENST00000520119 ICAM1P05362 532 aa13□□□□□ -0.33
IGHV1-17-201ENST00000520119 ITGB8P26012 769 aa13□□□□□ -0.33
IGHV1-17-201ENST00000520119 NKX3-2P78367 333 aa13□□□□□ -0.33
IGHV1-17-201ENST00000520119 SMAD3P84022 425 aaKnown RBP13□□□□□ -0.33
IGHV1-17-201ENST00000520119 TNFAIP2Q03169 654 aa13□□□□□ -0.33
IGHV1-17-201ENST00000520119 NMIQ13287 307 aaPredicted RBP13□□□□□ -0.33
IGHV1-17-201ENST00000520119 RRP12Q5JTH9 1297 aaKnown RBP13□□□□□ -0.33
IGHV1-17-201ENST00000520119 ZNF697Q5TEC3 545 aa13□□□□□ -0.33
IGHV1-17-201ENST00000520119 BTNL9Q6UXG8 535 aa13□□□□□ -0.33
IGHV1-17-201ENST00000520119 VTI1AQ96AJ9 217 aa13□□□□□ -0.33
IGHV1-17-201ENST00000520119 RANBP17Q9H2T7 1088 aaKnown RBP13□□□□□ -0.33
IGHV1-17-201ENST00000520119 CYP39A1Q9NYL5 469 aa13□□□□□ -0.33
IGHV1-17-201ENST00000520119 CCPG1Q9ULG6 757 aa13□□□□□ -0.33
IGHV1-17-201ENST00000520119 MTMR7Q9Y216 660 aa13□□□□□ -0.33
IGHV1-17-201ENST00000520119 UNC80Q8N2C7 3258 aa12.99□□□□□ -0.33
IGHV1-17-201ENST00000520119 A0A0U1RQG5 324 aaPredicted RBP12.99□□□□□ -0.33
IGHV1-17-201ENST00000520119 CDK7P50613 346 aa12.99□□□□□ -0.33
IGHV1-17-201ENST00000520119 SNAP25P60880 206 aa12.99□□□□□ -0.33
IGHV1-17-201ENST00000520119 FPGSQ05932 587 aa12.99□□□□□ -0.33
IGHV1-17-201ENST00000520119 MUM1L1Q5H9M0 696 aa12.99□□□□□ -0.33
IGHV1-17-201ENST00000520119 SYDE2Q5VT97 1194 aa12.99□□□□□ -0.33
IGHV1-17-201ENST00000520119 MFSD6Q6ZSS7 791 aa12.99□□□□□ -0.33
IGHV1-17-201ENST00000520119 NOL8Q76FK4 1167 aaKnown RBP12.99□□□□□ -0.33
IGHV1-17-201ENST00000520119 RASGRP2Q7LDG7 609 aa12.99□□□□□ -0.33
IGHV1-17-201ENST00000520119 ZNF589Q86UQ0 364 aaPredicted RBP12.99□□□□□ -0.33
IGHV1-17-201ENST00000520119 RILPL2Q969X0 211 aa12.99□□□□□ -0.33
IGHV1-17-201ENST00000520119 TTC14Q96N46 770 aa12.99□□□□□ -0.33
IGHV1-17-201ENST00000520119 TMEM47Q9BQJ4 181 aa12.99□□□□□ -0.33
IGHV1-17-201ENST00000520119 RNF41Q9H4P4 317 aaPredicted RBP12.99□□□□□ -0.33
IGHV1-17-201ENST00000520119 PNMA2Q9UL42 364 aa12.99□□□□□ -0.33
IGHV1-17-201ENST00000520119 PCDHGA4Q9Y5G9 962 aa12.99□□□□□ -0.33
IGHV1-17-201ENST00000520119 CDH23Q9H251 3354 aa12.98□□□□□ -0.33
IGHV1-17-201ENST00000520119 GRXCR2A6NFK2 248 aa12.98□□□□□ -0.33
IGHV1-17-201ENST00000520119 ARVCFO00192 962 aa12.98□□□□□ -0.33
IGHV1-17-201ENST00000520119 CTAGE5O15320 804 aa12.98□□□□□ -0.33
IGHV1-17-201ENST00000520119 TIMP1P01033 207 aa12.98□□□□□ -0.33
IGHV1-17-201ENST00000520119 SLC16A2P36021 539 aa12.98□□□□□ -0.33
IGHV1-17-201ENST00000520119 NT5C2P49902 561 aa12.98□□□□□ -0.33
IGHV1-17-201ENST00000520119 HAND2P61296 217 aa12.98□□□□□ -0.33
IGHV1-17-201ENST00000520119 AKNAD1Q5T1N1 836 aa12.98□□□□□ -0.33
IGHV1-17-201ENST00000520119 IQSEC1Q6DN90 963 aa12.98□□□□□ -0.33
IGHV1-17-201ENST00000520119 TTBK2Q6IQ55 1244 aa12.98□□□□□ -0.33
IGHV1-17-201ENST00000520119 B4GALNT3Q6L9W6 998 aa12.98□□□□□ -0.33
IGHV1-17-201ENST00000520119 NSMFQ6X4W1 530 aa12.98□□□□□ -0.33
IGHV1-17-201ENST00000520119 CHD1LQ86WJ1 897 aa12.98□□□□□ -0.33
IGHV1-17-201ENST00000520119 RNPC3Q96LT9 517 aaKnown RBP12.98□□□□□ -0.33
IGHV1-17-201ENST00000520119 GUCD1Q96NT3 240 aa12.98□□□□□ -0.33
IGHV1-17-201ENST00000520119 OSBPL3Q9H4L5 887 aa12.98□□□□□ -0.33
IGHV1-17-201ENST00000520119 ADD3Q9UEY8 706 aaKnown RBP12.98□□□□□ -0.33
IGHV1-17-201ENST00000520119 TBX21Q9UL17 535 aa12.98□□□□□ -0.33
IGHV1-17-201ENST00000520119 GNEQ9Y223 722 aaKnown RBP12.98□□□□□ -0.33
IGHV1-17-201ENST00000520119 ASTN1O14525 1302 aa12.97□□□□□ -0.33
IGHV1-17-201ENST00000520119 LOC102724159A0A0B4J2E5 919 aa12.97□□□□□ -0.33
IGHV1-17-201ENST00000520119 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.97□□□□□ -0.33
IGHV1-17-201ENST00000520119 DLL1O00548 723 aa12.97□□□□□ -0.33
IGHV1-17-201ENST00000520119 TLR3O15455 904 aaKnown RBP12.97□□□□□ -0.33
IGHV1-17-201ENST00000520119 ZEB2O60315 1214 aa12.97□□□□□ -0.33
IGHV1-17-201ENST00000520119 CABYRO75952 493 aa12.97□□□□□ -0.33
IGHV1-17-201ENST00000520119 PDHBP11177 359 aa12.97□□□□□ -0.33
IGHV1-17-201ENST00000520119 SDSP20132 328 aa12.97□□□□□ -0.33
IGHV1-17-201ENST00000520119 EPHB4P54760 987 aa12.97□□□□□ -0.33
IGHV1-17-201ENST00000520119 NUCB1Q02818 461 aa12.97□□□□□ -0.33
IGHV1-17-201ENST00000520119 PWP2Q15269 919 aaKnown RBP12.97□□□□□ -0.33
IGHV1-17-201ENST00000520119 MFSD5Q6N075 450 aa12.97□□□□□ -0.33
IGHV1-17-201ENST00000520119 TLK2Q86UE8 772 aa12.97□□□□□ -0.33
IGHV1-17-201ENST00000520119 PLEKHM2Q8IWE5 1019 aa12.97□□□□□ -0.33
IGHV1-17-201ENST00000520119 MORC4Q8TE76 937 aa12.97□□□□□ -0.33
IGHV1-17-201ENST00000520119 ESR2Q92731 530 aa12.97□□□□□ -0.33
IGHV1-17-201ENST00000520119 FAM161BQ96MY7 647 aa12.97□□□□□ -0.33
IGHV1-17-201ENST00000520119 SEZ6LQ9BYH1 1024 aa12.97□□□□□ -0.33
IGHV1-17-201ENST00000520119 AP5M1Q9H0R1 490 aa12.97□□□□□ -0.33
IGHV1-17-201ENST00000520119 VTA1Q9NP79 307 aa12.97□□□□□ -0.33
IGHV1-17-201ENST00000520119 GPCPD1Q9NPB8 672 aa12.97□□□□□ -0.33
IGHV1-17-201ENST00000520119 Q9Y3F1 56 aa12.97□□□□□ -0.33
IGHV1-17-201ENST00000520119 FRMPD2Q68DX3 1309 aaPredicted RBP12.96□□□□□ -0.33
IGHV1-17-201ENST00000520119 HOXB3P14651 431 aaPredicted RBP12.96□□□□□ -0.33
IGHV1-17-201ENST00000520119 SMPD1P17405 629 aa12.96□□□□□ -0.33
IGHV1-17-201ENST00000520119 BEX3Q00994 111 aa12.96□□□□□ -0.33
IGHV1-17-201ENST00000520119 ZNF543Q08ER8 600 aa12.96□□□□□ -0.33
IGHV1-17-201ENST00000520119 BAATQ14032 418 aaPredicted RBP12.96□□□□□ -0.33
IGHV1-17-201ENST00000520119 FSCN1Q16658 493 aaKnown RBP12.96□□□□□ -0.33
IGHV1-17-201ENST00000520119 TAPT1Q6NXT6 567 aa12.96□□□□□ -0.33
IGHV1-17-201ENST00000520119 YTHDC1Q96MU7 727 aaKnown RBP12.96□□□□□ -0.33
IGHV1-17-201ENST00000520119 SEMA6BQ9H3T3 888 aa12.96□□□□□ -0.33
IGHV1-17-201ENST00000520119 TMEM265A0A087WTH1 108 aa12.95□□□□□ -0.34
IGHV1-17-201ENST00000520119 PTPDC1A2A3K4 754 aa12.95□□□□□ -0.34
IGHV1-17-201ENST00000520119 HIP1O00291 1037 aa12.95□□□□□ -0.34
IGHV1-17-201ENST00000520119 ZNF213O14771 459 aa12.95□□□□□ -0.34
IGHV1-17-201ENST00000520119 DYNC1LI2O43237 492 aaPredicted RBP12.95□□□□□ -0.34
IGHV1-17-201ENST00000520119 IGHDP01880 384 aa12.95□□□□□ -0.34
IGHV1-17-201ENST00000520119 SNHG28P0DPA3 235 aa12.95□□□□□ -0.34
IGHV1-17-201ENST00000520119 PPIGQ13427 754 aaKnown RBP eCLIP12.95□□□□□ -0.34
IGHV1-17-201ENST00000520119 CCDC178Q5BJE1 867 aa12.95□□□□□ -0.34
IGHV1-17-201ENST00000520119 GPATCH4Q5T3I0 446 aaKnown RBP12.95□□□□□ -0.34
IGHV1-17-201ENST00000520119 CXCL17Q6UXB2 119 aa12.95□□□□□ -0.34
IGHV1-17-201ENST00000520119 KIAA1211Q6ZU35 1233 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms