RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 SPATA6Q9NWH7 488 aaPredicted RBP5.27□□□□□ -1.57
CSMD3-209ENST00000519485 UBP1Q9NZI7 540 aa5.27□□□□□ -1.57
CSMD3-209ENST00000519485 ADAMTS1Q9UHI8 967 aa5.27□□□□□ -1.57
CSMD3-209ENST00000519485 A0A087WZG4 1122 aa5.26□□□□□ -1.57
CSMD3-209ENST00000519485 ACRP10323 421 aa5.26□□□□□ -1.57
CSMD3-209ENST00000519485 PMLP29590 882 aa5.26□□□□□ -1.57
CSMD3-209ENST00000519485 NETO2Q8NC67 525 aa5.26□□□□□ -1.57
CSMD3-209ENST00000519485 RGS22Q8NE09 1264 aa5.26□□□□□ -1.57
CSMD3-209ENST00000519485 GIPC2Q8TF65 315 aa5.26□□□□□ -1.57
CSMD3-209ENST00000519485 DDX1Q92499 740 aaKnown RBP5.26□□□□□ -1.57
CSMD3-209ENST00000519485 SORCS2Q96PQ0 1159 aa5.26□□□□□ -1.57
CSMD3-209ENST00000519485 DBR1Q9UK59 544 aaKnown RBP5.26□□□□□ -1.57
CSMD3-209ENST00000519485 SF3B6Q9Y3B4 125 aaKnown RBP5.26□□□□□ -1.57
CSMD3-209ENST00000519485 CCDC180Q9P1Z9 1646 aa5.26□□□□□ -1.57
CSMD3-209ENST00000519485 ZBTB7AO95365 584 aa5.25□□□□□ -1.57
CSMD3-209ENST00000519485 IMPDH2P12268 514 aa5.25□□□□□ -1.57
CSMD3-209ENST00000519485 CACNB2Q08289 660 aaPredicted RBP5.25□□□□□ -1.57
CSMD3-209ENST00000519485 TBC1D10BQ4KMP7 808 aaPredicted RBP5.25□□□□□ -1.57
CSMD3-209ENST00000519485 RCSD1Q6JBY9 416 aa5.25□□□□□ -1.57
CSMD3-209ENST00000519485 TTLL7Q6ZT98 887 aa5.25□□□□□ -1.57
CSMD3-209ENST00000519485 SLC16A11Q8NCK7 471 aa5.25□□□□□ -1.57
CSMD3-209ENST00000519485 SMARCC2Q8TAQ2 1214 aa5.25□□□□□ -1.57
CSMD3-209ENST00000519485 PEX11GQ96HA9 241 aa5.25□□□□□ -1.57
CSMD3-209ENST00000519485 SSBP3Q9BWW4 388 aaPredicted RBP5.25□□□□□ -1.57
CSMD3-209ENST00000519485 ZNRF3Q9ULT6 936 aa5.25□□□□□ -1.57
CSMD3-209ENST00000519485 CD247P20963 164 aa5.24□□□□□ -1.57
CSMD3-209ENST00000519485 MCM4P33991 863 aa5.24□□□□□ -1.57
CSMD3-209ENST00000519485 POU4F1Q01851 419 aa5.24□□□□□ -1.57
CSMD3-209ENST00000519485 NOL9Q5SY16 702 aaKnown RBP5.24□□□□□ -1.57
CSMD3-209ENST00000519485 HS2ST1Q7LGA3 356 aa5.24□□□□□ -1.57
CSMD3-209ENST00000519485 CABP7Q86V35 215 aa5.24□□□□□ -1.57
CSMD3-209ENST00000519485 PPFIBP1Q86W92 1011 aa5.24□□□□□ -1.57
CSMD3-209ENST00000519485 FIBCD1Q8N539 461 aa5.24□□□□□ -1.57
CSMD3-209ENST00000519485 ADAMTS17Q8TE56 1095 aa5.24□□□□□ -1.57
CSMD3-209ENST00000519485 NKD1Q969G9 470 aa5.24□□□□□ -1.57
CSMD3-209ENST00000519485 TM9SF2Q99805 663 aa5.24□□□□□ -1.57
CSMD3-209ENST00000519485 PCDH18Q9HCL0 1135 aa5.24□□□□□ -1.57
CSMD3-209ENST00000519485 NUDT5Q9UKK9 219 aa5.24□□□□□ -1.57
CSMD3-209ENST00000519485 CENPBP07199 599 aaPredicted RBP5.23□□□□□ -1.57
CSMD3-209ENST00000519485 TACR1P25103 407 aa5.23□□□□□ -1.57
CSMD3-209ENST00000519485 FAM26FQ5R3K3 315 aa5.23□□□□□ -1.57
CSMD3-209ENST00000519485 AXDND1Q5T1B0 1012 aaPredicted RBP5.23□□□□□ -1.57
CSMD3-209ENST00000519485 EEF1DP3Q658K8 133 aa5.23□□□□□ -1.57
CSMD3-209ENST00000519485 DCAF15Q66K64 600 aa5.23□□□□□ -1.57
CSMD3-209ENST00000519485 NOX5Q96PH1 765 aa5.23□□□□□ -1.57
CSMD3-209ENST00000519485 DIS3Q9Y2L1 958 aaKnown RBP5.23□□□□□ -1.57
CSMD3-209ENST00000519485 IFNGR1P15260 489 aa5.22□□□□□ -1.57
CSMD3-209ENST00000519485 MFAP1P55081 439 aaKnown RBP5.22□□□□□ -1.57
CSMD3-209ENST00000519485 KIAA2012Q0VF49 1180 aa5.22□□□□□ -1.57
CSMD3-209ENST00000519485 USP48Q86UV5 1035 aa5.22□□□□□ -1.57
CSMD3-209ENST00000519485 RBBP8NLQ8NC74 664 aaPredicted RBP5.22□□□□□ -1.57
CSMD3-209ENST00000519485 DVL3Q92997 716 aaPredicted RBP5.22□□□□□ -1.57
CSMD3-209ENST00000519485 C8orf49Q96NF6 230 aa5.22□□□□□ -1.57
CSMD3-209ENST00000519485 MTA3Q9BTC8 594 aa5.22□□□□□ -1.57
CSMD3-209ENST00000519485 GGT7Q9UJ14 662 aa5.22□□□□□ -1.57
CSMD3-209ENST00000519485 ITGA4P13612 1032 aa5.21□□□□□ -1.58
CSMD3-209ENST00000519485 RPL13P26373 211 aaKnown RBP5.21□□□□□ -1.58
CSMD3-209ENST00000519485 LGI4Q8N135 537 aa5.21□□□□□ -1.58
CSMD3-209ENST00000519485 LZTR1Q8N653 840 aa5.21□□□□□ -1.58
CSMD3-209ENST00000519485 BRF1Q92994 677 aa5.21□□□□□ -1.58
CSMD3-209ENST00000519485 ZBTB8AQ96BR9 441 aa5.21□□□□□ -1.58
CSMD3-209ENST00000519485 LOXL4Q96JB6 756 aa5.21□□□□□ -1.58
CSMD3-209ENST00000519485 ZNF451Q9Y4E5 1061 aa5.21□□□□□ -1.58
CSMD3-209ENST00000519485 AURKAO14965 403 aa5.2□□□□□ -1.58
CSMD3-209ENST00000519485 SMARCA5O60264 1052 aaPredicted RBP5.2□□□□□ -1.58
CSMD3-209ENST00000519485 FSHBP01225 129 aa5.2□□□□□ -1.58
CSMD3-209ENST00000519485 CD3EP07766 207 aa5.2□□□□□ -1.58
CSMD3-209ENST00000519485 CYP2C8P10632 490 aa5.2□□□□□ -1.58
CSMD3-209ENST00000519485 TACR2P21452 398 aa5.2□□□□□ -1.58
CSMD3-209ENST00000519485 THBS2P35442 1172 aa5.2□□□□□ -1.58
CSMD3-209ENST00000519485 TDRD10Q5VZ19 366 aaKnown RBP5.2□□□□□ -1.58
CSMD3-209ENST00000519485 FBLN5Q9UBX5 448 aa5.2□□□□□ -1.58
CSMD3-209ENST00000519485 ZNF214Q9UL59 606 aaPredicted RBP5.2□□□□□ -1.58
CSMD3-209ENST00000519485 TSC22D4Q9Y3Q8 395 aa5.2□□□□□ -1.58
CSMD3-209ENST00000519485 CYR61O00622 381 aa5.19□□□□□ -1.58
CSMD3-209ENST00000519485 C6P13671 934 aa5.19□□□□□ -1.58
CSMD3-209ENST00000519485 ACVRL1P37023 503 aa5.19□□□□□ -1.58
CSMD3-209ENST00000519485 MRPL58Q14197 206 aaKnown RBP5.19□□□□□ -1.58
CSMD3-209ENST00000519485 RGL3Q3MIN7 710 aa5.19□□□□□ -1.58
CSMD3-209ENST00000519485 WWC2Q6AWC2 1192 aa5.19□□□□□ -1.58
CSMD3-209ENST00000519485 BORAQ6PGQ7 559 aa5.19□□□□□ -1.58
CSMD3-209ENST00000519485 GORASP1Q9BQQ3 440 aa5.19□□□□□ -1.58
CSMD3-209ENST00000519485 NOL6Q9H6R4 1146 aaKnown RBP5.19□□□□□ -1.58
CSMD3-209ENST00000519485 TRBV23OR9-2A0A075B6M9 112 aa5.18□□□□□ -1.58
CSMD3-209ENST00000519485 CBFA2T2O43439 604 aa5.18□□□□□ -1.58
CSMD3-209ENST00000519485 PPP1R11O60927 126 aaPredicted RBP5.18□□□□□ -1.58
CSMD3-209ENST00000519485 C8BP07358 591 aa5.18□□□□□ -1.58
CSMD3-209ENST00000519485 GUCY2CP25092 1073 aa5.18□□□□□ -1.58
CSMD3-209ENST00000519485 GDF5P43026 501 aa5.18□□□□□ -1.58
CSMD3-209ENST00000519485 TCEAL1Q15170 157 aa5.18□□□□□ -1.58
CSMD3-209ENST00000519485 CRIP3Q6Q6R5 217 aa5.18□□□□□ -1.58
CSMD3-209ENST00000519485 FAM124AQ86V42 546 aa5.18□□□□□ -1.58
CSMD3-209ENST00000519485 KIAA0825Q8IV33 1275 aa5.18□□□□□ -1.58
CSMD3-209ENST00000519485 KYQ8NBH2 561 aa5.18□□□□□ -1.58
CSMD3-209ENST00000519485 C11orf84Q9BUA3 381 aaPredicted RBP5.18□□□□□ -1.58
CSMD3-209ENST00000519485 BCAS3Q9H6U6 928 aa5.18□□□□□ -1.58
CSMD3-209ENST00000519485 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.18□□□□□ -1.58
CSMD3-209ENST00000519485 WHRNQ9P202 907 aa5.18□□□□□ -1.58
CSMD3-209ENST00000519485 INVSQ9Y283 1065 aa5.18□□□□□ -1.58
CSMD3-209ENST00000519485 MROH6A6NGR9 719 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms