RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 ADCY7P51828 1080 aa16.48■□□□□ 0.23
CLN8-204ENST00000519254 USP17L24Q0WX57 530 aa16.48■□□□□ 0.23
CLN8-204ENST00000519254 SNAPC2Q13487 334 aa16.48■□□□□ 0.23
CLN8-204ENST00000519254 CATSPERGQ6ZRH7 1159 aa16.48■□□□□ 0.23
CLN8-204ENST00000519254 CPXCR1Q8N123 301 aa16.48■□□□□ 0.23
CLN8-204ENST00000519254 PROCA1Q8NCQ7 364 aaPredicted RBP16.48■□□□□ 0.23
CLN8-204ENST00000519254 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.47■□□□□ 0.23
CLN8-204ENST00000519254 ATP2C1P98194 919 aaPredicted RBP16.47■□□□□ 0.23
CLN8-204ENST00000519254 PTGDRQ13258 359 aa16.47■□□□□ 0.23
CLN8-204ENST00000519254 COG2Q14746 738 aa16.47■□□□□ 0.23
CLN8-204ENST00000519254 PPP1R18Q6NYC8 613 aa16.47■□□□□ 0.23
CLN8-204ENST00000519254 CSRNP2Q9H175 543 aa16.47■□□□□ 0.23
CLN8-204ENST00000519254 DNAJC25Q9H1X3 360 aa16.47■□□□□ 0.23
CLN8-204ENST00000519254 CBX8Q9HC52 389 aa16.47■□□□□ 0.23
CLN8-204ENST00000519254 KIAA1468Q9P260 1216 aa16.47■□□□□ 0.23
CLN8-204ENST00000519254 PARP14Q460N5 1801 aa16.47■□□□□ 0.23
CLN8-204ENST00000519254 GNA11P29992 359 aa16.46■□□□□ 0.23
CLN8-204ENST00000519254 FERMT2Q96AC1 680 aa16.46■□□□□ 0.23
CLN8-204ENST00000519254 AGBL1Q96MI9 1066 aa16.46■□□□□ 0.23
CLN8-204ENST00000519254 RAVER2Q9HCJ3 691 aaKnown RBP16.46■□□□□ 0.23
CLN8-204ENST00000519254 CCPG1Q9ULG6 757 aa16.46■□□□□ 0.23
CLN8-204ENST00000519254 A0A087WWV3 80 aa16.46■□□□□ 0.22
CLN8-204ENST00000519254 CCDC194A0A1B0GVG4 234 aa16.46■□□□□ 0.22
CLN8-204ENST00000519254 ESYT2A0FGR8 921 aa16.46■□□□□ 0.22
CLN8-204ENST00000519254 VWA5AO00534 786 aa16.46■□□□□ 0.22
CLN8-204ENST00000519254 ZBED4O75132 1171 aa16.46■□□□□ 0.22
CLN8-204ENST00000519254 DSG3P32926 999 aa16.46■□□□□ 0.22
CLN8-204ENST00000519254 STX1AQ16623 288 aa16.46■□□□□ 0.22
CLN8-204ENST00000519254 LONRF3Q496Y0 759 aa16.46■□□□□ 0.22
CLN8-204ENST00000519254 USP49Q70CQ1 688 aa16.46■□□□□ 0.22
CLN8-204ENST00000519254 FASTKD5Q7L8L6 764 aaKnown RBP16.46■□□□□ 0.22
CLN8-204ENST00000519254 C4orf32Q8N8J7 132 aa16.46■□□□□ 0.22
CLN8-204ENST00000519254 PSTPIP2Q9H939 334 aa16.46■□□□□ 0.22
CLN8-204ENST00000519254 SLC38A10Q9HBR0 1119 aa16.46■□□□□ 0.22
CLN8-204ENST00000519254 FAM13BQ9NYF5 915 aa16.46■□□□□ 0.22
CLN8-204ENST00000519254 BIN2Q9UBW5 565 aaPredicted RBP16.46■□□□□ 0.22
CLN8-204ENST00000519254 AGTPBP1Q9UPW5 1226 aa16.46■□□□□ 0.22
CLN8-204ENST00000519254 TOMM70O94826 608 aa16.45■□□□□ 0.22
CLN8-204ENST00000519254 CAVIN2O95810 425 aa16.45■□□□□ 0.22
CLN8-204ENST00000519254 ICAM1P05362 532 aa16.45■□□□□ 0.22
CLN8-204ENST00000519254 MCM7P33993 719 aa16.45■□□□□ 0.22
CLN8-204ENST00000519254 ZNF157P51786 506 aaPredicted RBP16.45■□□□□ 0.22
CLN8-204ENST00000519254 IRX3P78415 501 aaPredicted RBP16.45■□□□□ 0.22
CLN8-204ENST00000519254 UBE2SQ16763 222 aa16.45■□□□□ 0.22
CLN8-204ENST00000519254 JAKMIP3Q5VZ66 844 aa16.45■□□□□ 0.22
CLN8-204ENST00000519254 SPRYD7Q5W111 196 aa16.45■□□□□ 0.22
CLN8-204ENST00000519254 KRBA2Q6ZNG9 492 aa16.45■□□□□ 0.22
CLN8-204ENST00000519254 C11orf57Q6ZUT1 292 aaPredicted RBP16.45■□□□□ 0.22
CLN8-204ENST00000519254 LUZP1Q86V48 1076 aa16.45■□□□□ 0.22
CLN8-204ENST00000519254 REXO1Q8N1G1 1221 aaKnown RBP16.45■□□□□ 0.22
CLN8-204ENST00000519254 ZNF784Q8NCA9 323 aaPredicted RBP16.45■□□□□ 0.22
CLN8-204ENST00000519254 CUL5Q93034 780 aa16.45■□□□□ 0.22
CLN8-204ENST00000519254 RIC8AQ9NPQ8 531 aa16.45■□□□□ 0.22
CLN8-204ENST00000519254 TMEM260Q9NX78 707 aa16.45■□□□□ 0.22
CLN8-204ENST00000519254 USP25Q9UHP3 1055 aa16.45■□□□□ 0.22
CLN8-204ENST00000519254 ABT1Q9ULW3 272 aaKnown RBP16.45■□□□□ 0.22
CLN8-204ENST00000519254 ZNF536O15090 1300 aa16.44■□□□□ 0.22
CLN8-204ENST00000519254 RLFQ13129 1914 aa16.44■□□□□ 0.22
CLN8-204ENST00000519254 SPDYE16A6NNV3 312 aaPredicted RBP16.44■□□□□ 0.22
CLN8-204ENST00000519254 ZNF165P49910 485 aa16.44■□□□□ 0.22
CLN8-204ENST00000519254 GTF2A2P52657 109 aa16.44■□□□□ 0.22
CLN8-204ENST00000519254 MOGSQ13724 837 aa16.44■□□□□ 0.22
CLN8-204ENST00000519254 INF2Q27J81 1249 aa16.44■□□□□ 0.22
CLN8-204ENST00000519254 SAPCD2Q86UD0 394 aa16.44■□□□□ 0.22
CLN8-204ENST00000519254 HOMER2Q9NSB8 354 aa16.44■□□□□ 0.22
CLN8-204ENST00000519254 CCL15-CCL14A0A0B4J2E2 113 aa16.43■□□□□ 0.22
CLN8-204ENST00000519254 AP5Z1O43299 807 aa16.43■□□□□ 0.22
CLN8-204ENST00000519254 CETPP11597 493 aa16.43■□□□□ 0.22
CLN8-204ENST00000519254 ALAS1P13196 640 aa16.43■□□□□ 0.22
CLN8-204ENST00000519254 MRPL12P52815 198 aaKnown RBP16.43■□□□□ 0.22
CLN8-204ENST00000519254 TRAF1Q13077 416 aa16.43■□□□□ 0.22
CLN8-204ENST00000519254 IL17AQ16552 155 aa16.43■□□□□ 0.22
CLN8-204ENST00000519254 CCL15Q16663 113 aa16.43■□□□□ 0.22
CLN8-204ENST00000519254 ELOA2Q8IYF1 753 aaPredicted RBP16.43■□□□□ 0.22
CLN8-204ENST00000519254 ANO10Q9NW15 660 aa16.43■□□□□ 0.22
CLN8-204ENST00000519254 HOXC10Q9NYD6 342 aa16.43■□□□□ 0.22
CLN8-204ENST00000519254 COL11A1P12107 1806 aaPredicted RBP16.43■□□□□ 0.22
CLN8-204ENST00000519254 POLR2DO15514 142 aaKnown RBP16.43■□□□□ 0.22
CLN8-204ENST00000519254 ZBTB48P10074 688 aaPredicted RBP16.43■□□□□ 0.22
CLN8-204ENST00000519254 HOXA7P31268 230 aaPredicted RBP16.43■□□□□ 0.22
CLN8-204ENST00000519254 MDM2Q00987 491 aaPredicted RBP16.43■□□□□ 0.22
CLN8-204ENST00000519254 PLS1Q14651 629 aa16.43■□□□□ 0.22
CLN8-204ENST00000519254 IQCB1Q15051 598 aa16.43■□□□□ 0.22
CLN8-204ENST00000519254 USP17L6PQ6QN14 398 aa16.43■□□□□ 0.22
CLN8-204ENST00000519254 KRT25Q7Z3Z0 450 aa16.43■□□□□ 0.22
CLN8-204ENST00000519254 RASAL3Q86YV0 1011 aa16.43■□□□□ 0.22
CLN8-204ENST00000519254 EPSTI1Q96J88 318 aa16.43■□□□□ 0.22
CLN8-204ENST00000519254 ASCC2Q9H1I8 757 aaPredicted RBP16.43■□□□□ 0.22
CLN8-204ENST00000519254 TUBE1Q9UJT0 475 aa16.43■□□□□ 0.22
CLN8-204ENST00000519254 ABCB11O95342 1321 aa16.42■□□□□ 0.22
CLN8-204ENST00000519254 SMCHD1A6NHR9 2005 aa16.42■□□□□ 0.22
CLN8-204ENST00000519254 VWA3AA6NCI4 1184 aa16.42■□□□□ 0.22
CLN8-204ENST00000519254 FDX1P10109 184 aa16.42■□□□□ 0.22
CLN8-204ENST00000519254 PABPC4Q13310 644 aaKnown RBP eCLIP16.42■□□□□ 0.22
CLN8-204ENST00000519254 ARL6IP4Q66PJ3 421 aaKnown RBP16.42■□□□□ 0.22
CLN8-204ENST00000519254 GPAT2Q6NUI2 795 aa16.42■□□□□ 0.22
CLN8-204ENST00000519254 RGMBQ6NW40 437 aa16.42■□□□□ 0.22
CLN8-204ENST00000519254 CNNM3Q8NE01 707 aa16.42■□□□□ 0.22
CLN8-204ENST00000519254 MS4A4AQ96JQ5 239 aa16.42■□□□□ 0.22
CLN8-204ENST00000519254 P2RX7Q99572 595 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms