RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 GFRA1P56159 465 aa8□□□□□ -1.13
SQLE-203ENST00000518931 BMS1Q14692 1282 aaKnown RBP8□□□□□ -1.13
SQLE-203ENST00000518931 MPZL3Q6UWV2 235 aa8□□□□□ -1.13
SQLE-203ENST00000518931 DPH6Q7L8W6 267 aa8□□□□□ -1.13
SQLE-203ENST00000518931 EXOC8Q8IYI6 725 aa8□□□□□ -1.13
SQLE-203ENST00000518931 TMEM145Q8NBT3 493 aa8□□□□□ -1.13
SQLE-203ENST00000518931 FRS2Q8WU20 508 aa8□□□□□ -1.13
SQLE-203ENST00000518931 AARSD1Q9BTE6 412 aaKnown RBP8□□□□□ -1.13
SQLE-203ENST00000518931 IER2Q9BTL4 223 aa8□□□□□ -1.13
SQLE-203ENST00000518931 ARHGEF4Q9NR80 690 aa8□□□□□ -1.13
SQLE-203ENST00000518931 IMPACTQ9P2X3 320 aa8□□□□□ -1.13
SQLE-203ENST00000518931 YBX2Q9Y2T7 364 aaKnown RBP8□□□□□ -1.13
SQLE-203ENST00000518931 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8□□□□□ -1.13
SQLE-203ENST00000518931 KDM2BQ8NHM5 1336 aa8□□□□□ -1.13
SQLE-203ENST00000518931 TRBV23OR9-2A0A075B6M9 112 aa7.99□□□□□ -1.13
SQLE-203ENST00000518931 LOC102724159A0A0B4J2E5 919 aa7.99□□□□□ -1.13
SQLE-203ENST00000518931 PRODHO43272 600 aa7.99□□□□□ -1.13
SQLE-203ENST00000518931 SCG5P05408 212 aa7.99□□□□□ -1.13
SQLE-203ENST00000518931 PWP2Q15269 919 aaKnown RBP7.99□□□□□ -1.13
SQLE-203ENST00000518931 NFE2L2Q16236 605 aa7.99□□□□□ -1.13
SQLE-203ENST00000518931 KREMEN2Q8NCW0 462 aa7.99□□□□□ -1.13
SQLE-203ENST00000518931 NUP43Q8NFH3 380 aa7.99□□□□□ -1.13
SQLE-203ENST00000518931 ACSL6Q9UKU0 697 aa7.99□□□□□ -1.13
SQLE-203ENST00000518931 TRAV20A0A0B4J274 112 aa7.98□□□□□ -1.13
SQLE-203ENST00000518931 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.98□□□□□ -1.13
SQLE-203ENST00000518931 PNLIPP16233 465 aa7.98□□□□□ -1.13
SQLE-203ENST00000518931 CYP4F8P98187 520 aa7.98□□□□□ -1.13
SQLE-203ENST00000518931 MVKQ03426 396 aa7.98□□□□□ -1.13
SQLE-203ENST00000518931 NPLOC4Q8TAT6 608 aa7.98□□□□□ -1.13
SQLE-203ENST00000518931 KCTD13Q8WZ19 329 aa7.98□□□□□ -1.13
SQLE-203ENST00000518931 MMP19Q99542 508 aa7.98□□□□□ -1.13
SQLE-203ENST00000518931 CRTAC1Q9NQ79 661 aa7.98□□□□□ -1.13
SQLE-203ENST00000518931 TMEFF2Q9UIK5 374 aaPredicted RBP7.98□□□□□ -1.13
SQLE-203ENST00000518931 C7orf72A4D263 438 aa7.97□□□□□ -1.13
SQLE-203ENST00000518931 ARNTLO00327 626 aa7.97□□□□□ -1.13
SQLE-203ENST00000518931 ADCY3O60266 1144 aa7.97□□□□□ -1.13
SQLE-203ENST00000518931 DLX3O60479 287 aa7.97□□□□□ -1.13
SQLE-203ENST00000518931 MSL3P1P0C860 447 aa7.97□□□□□ -1.13
SQLE-203ENST00000518931 YOD1Q5VVQ6 348 aaPredicted RBP7.97□□□□□ -1.13
SQLE-203ENST00000518931 IQCEQ6IPM2 695 aa7.97□□□□□ -1.13
SQLE-203ENST00000518931 DENND5AQ6IQ26 1287 aa7.97□□□□□ -1.13
SQLE-203ENST00000518931 NSMFQ6X4W1 530 aa7.97□□□□□ -1.13
SQLE-203ENST00000518931 ZBTB38Q8NAP3 1195 aaPredicted RBP7.97□□□□□ -1.13
SQLE-203ENST00000518931 NLGN2Q8NFZ4 835 aa7.97□□□□□ -1.13
SQLE-203ENST00000518931 MRFAP1L1Q96HT8 127 aa7.97□□□□□ -1.13
SQLE-203ENST00000518931 FAM53CQ9NYF3 392 aa7.97□□□□□ -1.13
SQLE-203ENST00000518931 MEFVO15553 781 aaPredicted RBP7.96□□□□□ -1.14
SQLE-203ENST00000518931 PPP1R11O60927 126 aaPredicted RBP7.96□□□□□ -1.14
SQLE-203ENST00000518931 FAM153BP0C7A2 387 aa7.96□□□□□ -1.14
SQLE-203ENST00000518931 FGFR1P11362 822 aa7.96□□□□□ -1.14
SQLE-203ENST00000518931 PABPC1P11940 636 aaKnown RBP7.96□□□□□ -1.14
SQLE-203ENST00000518931 SDHBP21912 280 aa7.96□□□□□ -1.14
SQLE-203ENST00000518931 PDE6BP35913 854 aa7.96□□□□□ -1.14
SQLE-203ENST00000518931 MLANAQ16655 118 aa7.96□□□□□ -1.14
SQLE-203ENST00000518931 INF2Q27J81 1249 aa7.96□□□□□ -1.14
SQLE-203ENST00000518931 SLC35F1Q5T1Q4 408 aa7.96□□□□□ -1.14
SQLE-203ENST00000518931 GORABQ5T7V8 394 aa7.96□□□□□ -1.14
SQLE-203ENST00000518931 MBLAC2Q68D91 279 aa7.96□□□□□ -1.14
SQLE-203ENST00000518931 PRR23BQ6ZRT6 265 aa7.96□□□□□ -1.14
SQLE-203ENST00000518931 TEX2Q8IWB9 1127 aa7.96□□□□□ -1.14
SQLE-203ENST00000518931 OSBP2Q969R2 916 aa7.96□□□□□ -1.14
SQLE-203ENST00000518931 INTS4Q96HW7 963 aaKnown RBP7.96□□□□□ -1.14
SQLE-203ENST00000518931 CDC6Q99741 560 aa7.96□□□□□ -1.14
SQLE-203ENST00000518931 SLC6A17Q9H1V8 727 aa7.96□□□□□ -1.14
SQLE-203ENST00000518931 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.96□□□□□ -1.14
SQLE-203ENST00000518931 RNF114Q9Y508 228 aa7.96□□□□□ -1.14
SQLE-203ENST00000518931 A0A1W2PQJ5 194 aa7.95□□□□□ -1.14
SQLE-203ENST00000518931 LRRC10BA6NIK2 292 aa7.95□□□□□ -1.14
SQLE-203ENST00000518931 PAX4O43316 350 aa7.95□□□□□ -1.14
SQLE-203ENST00000518931 NPHS1O60500 1241 aa7.95□□□□□ -1.14
SQLE-203ENST00000518931 ARL4AP40617 200 aa7.95□□□□□ -1.14
SQLE-203ENST00000518931 MAP4K2Q12851 820 aa7.95□□□□□ -1.14
SQLE-203ENST00000518931 ADGRF1Q5T601 910 aa7.95□□□□□ -1.14
SQLE-203ENST00000518931 FOXB2Q5VYV0 432 aa7.95□□□□□ -1.14
SQLE-203ENST00000518931 E4F1Q66K89 784 aaPredicted RBP7.95□□□□□ -1.14
SQLE-203ENST00000518931 CCDC103Q8IW40 242 aa7.95□□□□□ -1.14
SQLE-203ENST00000518931 PPIL6Q8IXY8 311 aa7.95□□□□□ -1.14
SQLE-203ENST00000518931 LILRB2Q8N423 598 aa7.95□□□□□ -1.14
SQLE-203ENST00000518931 DIO2Q92813 273 aa7.95□□□□□ -1.14
SQLE-203ENST00000518931 C1orf159Q96HA4 380 aa7.95□□□□□ -1.14
SQLE-203ENST00000518931 PDLIM7Q9NR12 457 aa7.95□□□□□ -1.14
SQLE-203ENST00000518931 GULP1Q9UBP9 304 aa7.95□□□□□ -1.14
SQLE-203ENST00000518931 TACR1P25103 407 aa7.94□□□□□ -1.14
SQLE-203ENST00000518931 FAM209AQ5JX71 171 aa7.94□□□□□ -1.14
SQLE-203ENST00000518931 SCUBE1Q8IWY4 988 aa7.94□□□□□ -1.14
SQLE-203ENST00000518931 IPO9Q96P70 1041 aaKnown RBP7.94□□□□□ -1.14
SQLE-203ENST00000518931 DIRC2Q96SL1 478 aa7.94□□□□□ -1.14
SQLE-203ENST00000518931 PIF1Q9H611 641 aa7.94□□□□□ -1.14
SQLE-203ENST00000518931 RWDD3Q9Y3V2 267 aa7.94□□□□□ -1.14
SQLE-203ENST00000518931 CORO7P57737 925 aa7.93□□□□□ -1.14
SQLE-203ENST00000518931 IRX6P78412 446 aaPredicted RBP7.93□□□□□ -1.14
SQLE-203ENST00000518931 HSP90AB4PQ58FF6 505 aa7.93□□□□□ -1.14
SQLE-203ENST00000518931 ACBD5Q5T8D3 534 aaPredicted RBP7.93□□□□□ -1.14
SQLE-203ENST00000518931 USP53Q70EK8 1073 aa7.93□□□□□ -1.14
SQLE-203ENST00000518931 IRF2BP1Q8IU81 584 aa7.93□□□□□ -1.14
SQLE-203ENST00000518931 DPF3Q92784 378 aa7.93□□□□□ -1.14
SQLE-203ENST00000518931 NSUN3Q9H649 340 aaKnown RBP7.93□□□□□ -1.14
SQLE-203ENST00000518931 KCNK12Q9HB15 430 aa7.93□□□□□ -1.14
SQLE-203ENST00000518931 TRBV23-1A0A0A0MS06 115 aa7.92□□□□□ -1.14
SQLE-203ENST00000518931 BLACEA4D250 179 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms