RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 HINFPQ9BQA5 517 aa18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 TMEM47Q9BQJ4 181 aa18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 CUEDC2Q9H467 287 aa18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 JADE2Q9NQC1 790 aa18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 TCP11L1Q9NUJ3 509 aa18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 ANO9A1A5B4 782 aa18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 BICDL2A1A5D9 508 aa18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 PALM3A6NDB9 673 aaPredicted RBP18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 EPHB6O15197 1021 aa18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 OR52Z1P0C646 297 aa18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 TSPY3P0CV98 308 aa18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 TSPY8P0CW00 308 aa18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 MAP9Q49MG5 647 aa18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 SLC10A5Q5PT55 438 aa18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 ERGIC2Q96RQ1 377 aa18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 MMTAG2Q9BU76 263 aaKnown RBP18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 TSPYL1Q9H0U9 437 aa18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 SEMA6BQ9H3T3 888 aa18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 STX8Q9UNK0 236 aa18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 SPATA31A1Q5TZJ5 1347 aa18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 ROBO3Q96MS0 1386 aa18.47■□□□□ 0.55
PCDHGA11-202ENST00000518882 NUTM2BA6NNL0 878 aaPredicted RBP18.47■□□□□ 0.55
PCDHGA11-202ENST00000518882 NUTM2EB1AL46 878 aaPredicted RBP18.47■□□□□ 0.55
PCDHGA11-202ENST00000518882 IPO7O95373 1038 aaKnown RBP18.47■□□□□ 0.55
PCDHGA11-202ENST00000518882 MCM3P25205 808 aa18.47■□□□□ 0.55
PCDHGA11-202ENST00000518882 VAV2P52735 878 aa18.47■□□□□ 0.55
PCDHGA11-202ENST00000518882 AK8Q96MA6 479 aa18.47■□□□□ 0.55
PCDHGA11-202ENST00000518882 ZMYND12Q9H0C1 365 aa18.47■□□□□ 0.55
PCDHGA11-202ENST00000518882 CAPN6Q9Y6Q1 641 aa18.47■□□□□ 0.55
PCDHGA11-202ENST00000518882 CDK5RAP2Q96SN8 1893 aa18.47■□□□□ 0.55
PCDHGA11-202ENST00000518882 IVLP07476 585 aa18.47■□□□□ 0.55
PCDHGA11-202ENST00000518882 TECP42680 631 aa18.47■□□□□ 0.55
PCDHGA11-202ENST00000518882 GRIK5Q16478 980 aa18.47■□□□□ 0.55
PCDHGA11-202ENST00000518882 CCNI2Q6ZMN8 369 aaPredicted RBP18.47■□□□□ 0.55
PCDHGA11-202ENST00000518882 SECISBP2LQ93073 1101 aaKnown RBP18.47■□□□□ 0.55
PCDHGA11-202ENST00000518882 SELENOOQ9BVL4 669 aa18.47■□□□□ 0.55
PCDHGA11-202ENST00000518882 MAGEF1Q9HAY2 307 aa18.47■□□□□ 0.55
PCDHGA11-202ENST00000518882 IRS2Q9Y4H2 1338 aa18.47■□□□□ 0.55
PCDHGA11-202ENST00000518882 A0A1W2PQJ5 194 aa18.46■□□□□ 0.55
PCDHGA11-202ENST00000518882 KIF5AQ12840 1032 aa18.46■□□□□ 0.55
PCDHGA11-202ENST00000518882 DIXDC1Q155Q3 683 aa18.46■□□□□ 0.55
PCDHGA11-202ENST00000518882 FIGNQ5HY92 759 aa18.46■□□□□ 0.55
PCDHGA11-202ENST00000518882 FAM114A1Q8IWE2 563 aa18.46■□□□□ 0.55
PCDHGA11-202ENST00000518882 SLC39A2Q9NP94 309 aa18.46■□□□□ 0.55
PCDHGA11-202ENST00000518882 ARHGAP20Q9P2F6 1191 aa18.46■□□□□ 0.55
PCDHGA11-202ENST00000518882 KLRF2D3W0D1 207 aa18.46■□□□□ 0.54
PCDHGA11-202ENST00000518882 AGPSO00116 658 aa18.46■□□□□ 0.54
PCDHGA11-202ENST00000518882 GGCXP38435 758 aa18.46■□□□□ 0.54
PCDHGA11-202ENST00000518882 NAPAP54920 295 aa18.46■□□□□ 0.54
PCDHGA11-202ENST00000518882 CDK17Q00537 523 aa18.46■□□□□ 0.54
PCDHGA11-202ENST00000518882 EZH2Q15910 746 aaKnown RBP18.46■□□□□ 0.54
PCDHGA11-202ENST00000518882 CREG2Q8IUH2 290 aa18.46■□□□□ 0.54
PCDHGA11-202ENST00000518882 GPIHBP1Q8IV16 184 aa18.46■□□□□ 0.54
PCDHGA11-202ENST00000518882 AFAP1L1Q8TED9 768 aa18.46■□□□□ 0.54
PCDHGA11-202ENST00000518882 CCDC42Q96M95 316 aa18.46■□□□□ 0.54
PCDHGA11-202ENST00000518882 MLXIPQ9HAP2 919 aa18.46■□□□□ 0.54
PCDHGA11-202ENST00000518882 RASA1P20936 1047 aa18.45■□□□□ 0.54
PCDHGA11-202ENST00000518882 CCDC96Q2M329 555 aa18.45■□□□□ 0.54
PCDHGA11-202ENST00000518882 TGFBRAP1Q8WUH2 860 aa18.45■□□□□ 0.54
PCDHGA11-202ENST00000518882 CDCA7Q9BWT1 371 aaPredicted RBP18.45■□□□□ 0.54
PCDHGA11-202ENST00000518882 TRIM34Q9BYJ4 488 aa18.45■□□□□ 0.54
PCDHGA11-202ENST00000518882 ANKRD2Q9GZV1 360 aa18.45■□□□□ 0.54
PCDHGA11-202ENST00000518882 PLEKHA4Q9H4M7 779 aa18.45■□□□□ 0.54
PCDHGA11-202ENST00000518882 SNX12Q9UMY4 172 aa18.45■□□□□ 0.54
PCDHGA11-202ENST00000518882 PLAGL2Q9UPG8 496 aa18.45■□□□□ 0.54
PCDHGA11-202ENST00000518882 NONOQ15233 471 aaKnown RBP eCLIP18.44■□□□□ 0.54
PCDHGA11-202ENST00000518882 C2CD5Q86YS7 1000 aa18.44■□□□□ 0.54
PCDHGA11-202ENST00000518882 ZNF444Q8N0Y2 327 aaPredicted RBP18.44■□□□□ 0.54
PCDHGA11-202ENST00000518882 HDAC7Q8WUI4 952 aa18.44■□□□□ 0.54
PCDHGA11-202ENST00000518882 CCDC47Q96A33 483 aaKnown RBP18.44■□□□□ 0.54
PCDHGA11-202ENST00000518882 RASSF4Q9H2L5 321 aa18.44■□□□□ 0.54
PCDHGA11-202ENST00000518882 SAP30BPQ9UHR5 308 aaKnown RBP18.44■□□□□ 0.54
PCDHGA11-202ENST00000518882 SIK3Q9Y2K2 1263 aa18.44■□□□□ 0.54
PCDHGA11-202ENST00000518882 SMCO2A6NFE2 343 aa18.44■□□□□ 0.54
PCDHGA11-202ENST00000518882 FKBP15Q5T1M5 1219 aa18.44■□□□□ 0.54
PCDHGA11-202ENST00000518882 CENPPQ6IPU0 288 aa18.44■□□□□ 0.54
PCDHGA11-202ENST00000518882 KRT25Q7Z3Z0 450 aa18.44■□□□□ 0.54
PCDHGA11-202ENST00000518882 POTEDQ86YR6 584 aa18.44■□□□□ 0.54
PCDHGA11-202ENST00000518882 DRC1Q96MC2 740 aa18.44■□□□□ 0.54
PCDHGA11-202ENST00000518882 NLRP3Q96P20 1036 aa18.44■□□□□ 0.54
PCDHGA11-202ENST00000518882 IFIH1Q9BYX4 1025 aaKnown RBP18.44■□□□□ 0.54
PCDHGA11-202ENST00000518882 SH2D4AQ9H788 454 aa18.44■□□□□ 0.54
PCDHGA11-202ENST00000518882 FAM207AQ9NSI2 230 aaPredicted RBP18.44■□□□□ 0.54
PCDHGA11-202ENST00000518882 NRAPQ86VF7 1730 aa18.44■□□□□ 0.54
PCDHGA11-202ENST00000518882 DDX60LQ5H9U9 1706 aaKnown RBP18.43■□□□□ 0.54
PCDHGA11-202ENST00000518882 VGLL3A8MV65 326 aa18.43■□□□□ 0.54
PCDHGA11-202ENST00000518882 MOCS3O95396 460 aa18.43■□□□□ 0.54
PCDHGA11-202ENST00000518882 HNRNPH3P31942 346 aaKnown RBP18.43■□□□□ 0.54
PCDHGA11-202ENST00000518882 MRPS25P82663 173 aaKnown RBP18.43■□□□□ 0.54
PCDHGA11-202ENST00000518882 SPA17Q15506 151 aa18.43■□□□□ 0.54
PCDHGA11-202ENST00000518882 NEK8Q86SG6 692 aa18.43■□□□□ 0.54
PCDHGA11-202ENST00000518882 SRP68Q9UHB9 627 aaKnown RBP18.43■□□□□ 0.54
PCDHGA11-202ENST00000518882 JRKLQ9Y4A0 524 aa18.43■□□□□ 0.54
PCDHGA11-202ENST00000518882 PCDHA13Q9Y5I0 950 aa18.43■□□□□ 0.54
PCDHGA11-202ENST00000518882 LDHBP07195 334 aaKnown RBP18.43■□□□□ 0.54
PCDHGA11-202ENST00000518882 KIF11P52732 1056 aa18.43■□□□□ 0.54
PCDHGA11-202ENST00000518882 SPTY2D1Q68D10 685 aaPredicted RBP18.43■□□□□ 0.54
PCDHGA11-202ENST00000518882 CNNM4Q6P4Q7 775 aa18.43■□□□□ 0.54
PCDHGA11-202ENST00000518882 USP17L2Q6R6M4 530 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms