RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 CNPY2Q9Y2B0 182 aa25.46■■□□□ 1.67
VEGFA-217ENST00000518538 ASTN1O14525 1302 aa25.45■■□□□ 1.66
VEGFA-217ENST00000518538 CCDC196A0A1B0GTZ2 297 aa25.45■■□□□ 1.66
VEGFA-217ENST00000518538 MSCO60682 206 aa25.45■■□□□ 1.66
VEGFA-217ENST00000518538 SNAI1O95863 264 aaPredicted RBP25.45■■□□□ 1.66
VEGFA-217ENST00000518538 CNGA1P29973 690 aa25.45■■□□□ 1.66
VEGFA-217ENST00000518538 CCDC82Q8N4S0 544 aa25.45■■□□□ 1.66
VEGFA-217ENST00000518538 PURBQ96QR8 312 aaKnown RBP25.45■■□□□ 1.66
VEGFA-217ENST00000518538 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.45■■□□□ 1.66
VEGFA-217ENST00000518538 DDX20Q9UHI6 824 aaKnown RBP25.45■■□□□ 1.66
VEGFA-217ENST00000518538 KIAA0100Q14667 2235 aaKnown RBP25.45■■□□□ 1.66
VEGFA-217ENST00000518538 LCTP09848 1927 aa25.45■■□□□ 1.66
VEGFA-217ENST00000518538 CNTNAP5Q8WYK1 1306 aa25.44■■□□□ 1.66
VEGFA-217ENST00000518538 BAZ2BQ9UIF8 2168 aaKnown RBP25.44■■□□□ 1.66
VEGFA-217ENST00000518538 LOC102724159A0A0B4J2E5 919 aa25.44■■□□□ 1.66
VEGFA-217ENST00000518538 OPLAHO14841 1288 aa25.44■■□□□ 1.66
VEGFA-217ENST00000518538 SEPT4O43236 478 aa25.44■■□□□ 1.66
VEGFA-217ENST00000518538 CDC27P30260 824 aa25.44■■□□□ 1.66
VEGFA-217ENST00000518538 FUT2Q10981 343 aa25.44■■□□□ 1.66
VEGFA-217ENST00000518538 PWP2Q15269 919 aaKnown RBP25.44■■□□□ 1.66
VEGFA-217ENST00000518538 TFRCP02786 760 aaKnown RBP25.43■■□□□ 1.66
VEGFA-217ENST00000518538 ZNF865P0CJ78 1059 aaPredicted RBP25.43■■□□□ 1.66
VEGFA-217ENST00000518538 ALDH5A1P51649 535 aaPredicted RBP25.43■■□□□ 1.66
VEGFA-217ENST00000518538 GHRHRQ02643 423 aa25.43■■□□□ 1.66
VEGFA-217ENST00000518538 LHX8Q68G74 356 aa25.43■■□□□ 1.66
VEGFA-217ENST00000518538 SAMD3Q8N6K7 520 aa25.43■■□□□ 1.66
VEGFA-217ENST00000518538 DNERQ8NFT8 737 aa25.43■■□□□ 1.66
VEGFA-217ENST00000518538 TBC1D5Q92609 795 aa25.43■■□□□ 1.66
VEGFA-217ENST00000518538 ABHD16BQ9H3Z7 469 aa25.43■■□□□ 1.66
VEGFA-217ENST00000518538 MAP3K20Q9NYL2 800 aaKnown RBP25.43■■□□□ 1.66
VEGFA-217ENST00000518538 OGDHLQ9ULD0 1010 aa25.43■■□□□ 1.66
VEGFA-217ENST00000518538 PDIA3P30101 505 aaKnown RBP25.42■■□□□ 1.66
VEGFA-217ENST00000518538 HSD17B4P51659 736 aa25.42■■□□□ 1.66
VEGFA-217ENST00000518538 SYTL5Q8TDW5 730 aaPredicted RBP25.42■■□□□ 1.66
VEGFA-217ENST00000518538 MORC4Q8TE76 937 aa25.42■■□□□ 1.66
VEGFA-217ENST00000518538 ALDH8A1Q9H2A2 487 aaPredicted RBP25.42■■□□□ 1.66
VEGFA-217ENST00000518538 BRCA2P51587 3418 aa25.41■■□□□ 1.66
VEGFA-217ENST00000518538 CFBP00751 764 aa25.41■■□□□ 1.66
VEGFA-217ENST00000518538 ADD1P35611 737 aaKnown RBP25.41■■□□□ 1.66
VEGFA-217ENST00000518538 ACVR2BQ13705 512 aa25.41■■□□□ 1.66
VEGFA-217ENST00000518538 ZNF274Q96GC6 653 aaPredicted RBP25.41■■□□□ 1.66
VEGFA-217ENST00000518538 ZHX1Q9UKY1 873 aaPredicted RBP25.41■■□□□ 1.66
VEGFA-217ENST00000518538 KATNBL1Q9H079 304 aa25.4■■□□□ 1.66
VEGFA-217ENST00000518538 COL20A1Q9P218 1284 aa25.4■■□□□ 1.66
VEGFA-217ENST00000518538 hCG_1642624A0A1W2PR95 340 aa25.39■■□□□ 1.66
VEGFA-217ENST00000518538 AKR1A1P14550 325 aa25.39■■□□□ 1.66
VEGFA-217ENST00000518538 ANKLE1Q8NAG6 615 aa25.39■■□□□ 1.66
VEGFA-217ENST00000518538 MPHOSPH6Q99547 160 aaKnown RBP25.39■■□□□ 1.66
VEGFA-217ENST00000518538 LARP6Q9BRS8 491 aaKnown RBP25.39■■□□□ 1.66
VEGFA-217ENST00000518538 B4DLN1 442 aa25.38■■□□□ 1.65
VEGFA-217ENST00000518538 GCOM1H8Y6P7 765 aaPredicted RBP25.38■■□□□ 1.65
VEGFA-217ENST00000518538 POLR2MP0CAP2 368 aa25.38■■□□□ 1.65
VEGFA-217ENST00000518538 EDNRBP24530 442 aa25.38■■□□□ 1.65
VEGFA-217ENST00000518538 MRPL12P52815 198 aaKnown RBP25.38■■□□□ 1.65
VEGFA-217ENST00000518538 ANKRD1Q15327 319 aa25.38■■□□□ 1.65
VEGFA-217ENST00000518538 TAAR1Q96RJ0 339 aa25.38■■□□□ 1.65
VEGFA-217ENST00000518538 FAM184BQ9ULE4 1060 aa25.38■■□□□ 1.65
VEGFA-217ENST00000518538 DDX49Q9Y6V7 483 aaKnown RBP25.38■■□□□ 1.65
VEGFA-217ENST00000518538 V9GY48 417 aaPredicted RBP25.38■■□□□ 1.65
VEGFA-217ENST00000518538 LRRC37A2A6NM11 1700 aa25.37■■□□□ 1.65
VEGFA-217ENST00000518538 FRMPD3Q5JV73 1810 aa25.37■■□□□ 1.65
VEGFA-217ENST00000518538 MCM3APO60318 1980 aa25.37■■□□□ 1.65
VEGFA-217ENST00000518538 FARP2O94887 1054 aaPredicted RBP25.37■■□□□ 1.65
VEGFA-217ENST00000518538 UBE2Q1Q7Z7E8 422 aa25.37■■□□□ 1.65
VEGFA-217ENST00000518538 NSUN6Q8TEA1 469 aaKnown RBP25.37■■□□□ 1.65
VEGFA-217ENST00000518538 C22orf23Q9BZE7 217 aa25.37■■□□□ 1.65
VEGFA-217ENST00000518538 RARBP10826 455 aa25.36■■□□□ 1.65
VEGFA-217ENST00000518538 HOXA13P31271 388 aaPredicted RBP25.36■■□□□ 1.65
VEGFA-217ENST00000518538 RBM25P49756 843 aaKnown RBP25.36■■□□□ 1.65
VEGFA-217ENST00000518538 AK2P54819 239 aa25.36■■□□□ 1.65
VEGFA-217ENST00000518538 CCT2P78371 535 aaKnown RBP25.36■■□□□ 1.65
VEGFA-217ENST00000518538 MLLT1Q03111 559 aaPredicted RBP25.36■■□□□ 1.65
VEGFA-217ENST00000518538 NTRK3Q16288 839 aa25.36■■□□□ 1.65
VEGFA-217ENST00000518538 ANO1Q5XXA6 986 aa25.36■■□□□ 1.65
VEGFA-217ENST00000518538 HEATR3Q7Z4Q2 680 aa25.36■■□□□ 1.65
VEGFA-217ENST00000518538 RMDN3Q96TC7 470 aa25.36■■□□□ 1.65
VEGFA-217ENST00000518538 UPF2Q9HAU5 1272 aaKnown RBP25.36■■□□□ 1.65
VEGFA-217ENST00000518538 NCOA5Q9HCD5 579 aaKnown RBP25.36■■□□□ 1.65
VEGFA-217ENST00000518538 VTA1Q9NP79 307 aa25.36■■□□□ 1.65
VEGFA-217ENST00000518538 hCG_1984214I3L0E3 225 aa25.35■■□□□ 1.65
VEGFA-217ENST00000518538 NEK4P51957 841 aa25.35■■□□□ 1.65
VEGFA-217ENST00000518538 PDE4DQ08499 809 aa25.35■■□□□ 1.65
VEGFA-217ENST00000518538 CCDC144BQ3MJ40 725 aa25.35■■□□□ 1.65
VEGFA-217ENST00000518538 WWC2Q6AWC2 1192 aa25.35■■□□□ 1.65
VEGFA-217ENST00000518538 FBXO16Q8IX29 292 aaPredicted RBP25.35■■□□□ 1.65
VEGFA-217ENST00000518538 ZNF713Q8N859 430 aaPredicted RBP25.35■■□□□ 1.65
VEGFA-217ENST00000518538 GPKOWQ92917 476 aaPredicted RBP eCLIP25.35■■□□□ 1.659e-7■□□□□ 11
VEGFA-217ENST00000518538 IWS1Q96ST2 819 aa25.35■■□□□ 1.65
VEGFA-217ENST00000518538 RBM27Q9P2N5 1060 aaKnown RBP25.35■■□□□ 1.65
VEGFA-217ENST00000518538 IFNAR1P17181 557 aa25.34■■□□□ 1.65
VEGFA-217ENST00000518538 MNX1P50219 401 aaPredicted RBP25.34■■□□□ 1.65
VEGFA-217ENST00000518538 ARHGEF16Q5VV41 709 aa25.34■■□□□ 1.65
VEGFA-217ENST00000518538 EEPD1Q7L9B9 569 aa25.34■■□□□ 1.65
VEGFA-217ENST00000518538 PXMP2Q9NR77 195 aa25.34■■□□□ 1.65
VEGFA-217ENST00000518538 TPCN1Q9ULQ1 816 aa25.34■■□□□ 1.65
VEGFA-217ENST00000518538 PIK3CDO00329 1044 aa25.33■■□□□ 1.65
VEGFA-217ENST00000518538 PRPF3O43395 683 aaKnown RBP25.33■■□□□ 1.65
VEGFA-217ENST00000518538 STK3Q13188 491 aa25.33■■□□□ 1.65
VEGFA-217ENST00000518538 PFKFB3Q16875 520 aaPredicted RBP25.33■■□□□ 1.65
VEGFA-217ENST00000518538 TAPT1Q6NXT6 567 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms