RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 KIF1BPQ96EK5 621 aa10.61□□□□□ -0.71
PVT1-207ENST00000518528 MFSD14AQ96MC6 490 aa10.61□□□□□ -0.71
PVT1-207ENST00000518528 MPHOSPH6Q99547 160 aaKnown RBP10.61□□□□□ -0.71
PVT1-207ENST00000518528 RAD9AQ99638 391 aa10.61□□□□□ -0.71
PVT1-207ENST00000518528 WDR11Q9BZH6 1224 aa10.61□□□□□ -0.71
PVT1-207ENST00000518528 UPF3BQ9BZI7 483 aaKnown RBP10.61□□□□□ -0.71
PVT1-207ENST00000518528 PDGFCQ9NRA1 345 aa10.61□□□□□ -0.71
PVT1-207ENST00000518528 ZBED9Q6R2W3 1325 aa10.6□□□□□ -0.71
PVT1-207ENST00000518528 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.6□□□□□ -0.71
PVT1-207ENST00000518528 LOC102724159A0A0B4J2E5 919 aa10.6□□□□□ -0.71
PVT1-207ENST00000518528 MINDY4BA8MYZ0 360 aa10.6□□□□□ -0.71
PVT1-207ENST00000518528 NKRFO15226 690 aaKnown RBP eCLIP10.6□□□□□ -0.718e-7■■□□□ 12.5
PVT1-207ENST00000518528 PWP2Q15269 919 aaKnown RBP10.6□□□□□ -0.71
PVT1-207ENST00000518528 PTPROQ16827 1216 aa10.6□□□□□ -0.71
PVT1-207ENST00000518528 NBPF20Q3BBV1 942 aa10.6□□□□□ -0.71
PVT1-207ENST00000518528 CEP85Q6P2H3 762 aa10.6□□□□□ -0.71
PVT1-207ENST00000518528 OR6J1Q8NGC5 347 aa10.6□□□□□ -0.71
PVT1-207ENST00000518528 CAGE1Q8TC20 777 aa10.6□□□□□ -0.71
PVT1-207ENST00000518528 STAG1Q8WVM7 1258 aa10.6□□□□□ -0.71
PVT1-207ENST00000518528 FBXL18Q96ME1 805 aa10.6□□□□□ -0.71
PVT1-207ENST00000518528 BCL11AQ9H165 835 aa10.6□□□□□ -0.71
PVT1-207ENST00000518528 BOLA2Q9H3K6 86 aa10.6□□□□□ -0.71
PVT1-207ENST00000518528 MTMR4Q9NYA4 1195 aa10.6□□□□□ -0.71
PVT1-207ENST00000518528 ZNFX1Q9P2E3 1918 aaKnown RBP10.6□□□□□ -0.71
PVT1-207ENST00000518528 HMMRO75330 724 aa10.59□□□□□ -0.71
PVT1-207ENST00000518528 ARHGEF15O94989 841 aa10.59□□□□□ -0.71
PVT1-207ENST00000518528 SLC1A4P43007 532 aa10.59□□□□□ -0.71
PVT1-207ENST00000518528 ERVK-21P61565 698 aa10.59□□□□□ -0.71
PVT1-207ENST00000518528 WDR5P61964 334 aaKnown RBP10.59□□□□□ -0.71
PVT1-207ENST00000518528 NSMFQ6X4W1 530 aa10.59□□□□□ -0.71
PVT1-207ENST00000518528 STK11IPQ8N1F8 1099 aa10.59□□□□□ -0.71
PVT1-207ENST00000518528 LRRC47Q8N1G4 583 aaKnown RBP10.59□□□□□ -0.71
PVT1-207ENST00000518528 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.59□□□□□ -0.71
PVT1-207ENST00000518528 AFAP1L1Q8TED9 768 aa10.59□□□□□ -0.71
PVT1-207ENST00000518528 CEP95Q96GE4 821 aa10.59□□□□□ -0.71
PVT1-207ENST00000518528 CYP39A1Q9NYL5 469 aa10.59□□□□□ -0.71
PVT1-207ENST00000518528 PRKAG3Q9UGI9 489 aa10.59□□□□□ -0.71
PVT1-207ENST00000518528 MTUS1Q9ULD2 1270 aa10.59□□□□□ -0.71
PVT1-207ENST00000518528 NAV1Q8NEY1 1877 aa10.59□□□□□ -0.71
PVT1-207ENST00000518528 IGKV6D-41A0A0C4DH26 115 aa10.58□□□□□ -0.72
PVT1-207ENST00000518528 ABHD14A-ACY1A0A1B0GW23 586 aa10.58□□□□□ -0.72
PVT1-207ENST00000518528 GRXCR2A6NFK2 248 aa10.58□□□□□ -0.72
PVT1-207ENST00000518528 B4DLN1 442 aa10.58□□□□□ -0.72
PVT1-207ENST00000518528 PLA2G6O60733 806 aa10.58□□□□□ -0.72
PVT1-207ENST00000518528 RAB11FIP3O75154 756 aa10.58□□□□□ -0.72
PVT1-207ENST00000518528 SLC3A2P08195 630 aaKnown RBP10.58□□□□□ -0.72
PVT1-207ENST00000518528 TSPY3P0CV98 308 aa10.58□□□□□ -0.72
PVT1-207ENST00000518528 TSPY8P0CW00 308 aa10.58□□□□□ -0.72
PVT1-207ENST00000518528 ATP5JP18859 108 aa10.58□□□□□ -0.72
PVT1-207ENST00000518528 MRPL12P52815 198 aaKnown RBP10.58□□□□□ -0.72
PVT1-207ENST00000518528 PPP2R5BQ15173 497 aa10.58□□□□□ -0.72
PVT1-207ENST00000518528 TIGD5Q53EQ6 642 aa10.58□□□□□ -0.72
PVT1-207ENST00000518528 CNKSR3Q6P9H4 555 aa10.58□□□□□ -0.72
PVT1-207ENST00000518528 FBXO22Q8NEZ5 403 aa10.58□□□□□ -0.72
PVT1-207ENST00000518528 MORC4Q8TE76 937 aa10.58□□□□□ -0.72
PVT1-207ENST00000518528 GMCL1Q96IK5 515 aa10.58□□□□□ -0.72
PVT1-207ENST00000518528 HAUS7Q99871 368 aa10.58□□□□□ -0.72
PVT1-207ENST00000518528 SUGCTQ9HAC7 445 aa10.58□□□□□ -0.72
PVT1-207ENST00000518528 CCPG1Q9ULG6 757 aa10.58□□□□□ -0.72
PVT1-207ENST00000518528 BRWD1Q9NSI6 2320 aa10.58□□□□□ -0.72
PVT1-207ENST00000518528 POTEB3A0JP26 581 aa10.57□□□□□ -0.72
PVT1-207ENST00000518528 LCHNA4D1U4 455 aa10.57□□□□□ -0.72
PVT1-207ENST00000518528 GJB5O95377 273 aa10.57□□□□□ -0.72
PVT1-207ENST00000518528 IL9P15248 144 aa10.57□□□□□ -0.72
PVT1-207ENST00000518528 SELPP16109 830 aa10.57□□□□□ -0.72
PVT1-207ENST00000518528 GNAT2P19087 354 aa10.57□□□□□ -0.72
PVT1-207ENST00000518528 PTGS1P23219 599 aa10.57□□□□□ -0.72
PVT1-207ENST00000518528 TDO2P48775 406 aa10.57□□□□□ -0.72
PVT1-207ENST00000518528 CHMP4BP1P59074 171 aa10.57□□□□□ -0.72
PVT1-207ENST00000518528 PDE4BQ07343 736 aa10.57□□□□□ -0.72
PVT1-207ENST00000518528 IKBKEQ14164 716 aa10.57□□□□□ -0.72
PVT1-207ENST00000518528 PTGISQ16647 500 aa10.57□□□□□ -0.72
PVT1-207ENST00000518528 SLFNL1Q499Z3 407 aa10.57□□□□□ -0.72
PVT1-207ENST00000518528 POTEBQ6S5H4 581 aa10.57□□□□□ -0.72
PVT1-207ENST00000518528 SCFD2Q8WU76 684 aa10.57□□□□□ -0.72
PVT1-207ENST00000518528 STRBPQ96SI9 672 aaKnown RBP10.57□□□□□ -0.72
PVT1-207ENST00000518528 PUS7LQ9H0K6 701 aaKnown RBP10.57□□□□□ -0.72
PVT1-207ENST00000518528 PNMA2Q9UL42 364 aa10.57□□□□□ -0.72
PVT1-207ENST00000518528 LRRC37A2A6NM11 1700 aa10.57□□□□□ -0.72
PVT1-207ENST00000518528 RBM47A0AV96 593 aaKnown RBP10.56□□□□□ -0.72
PVT1-207ENST00000518528 LINC01553A4QN01 128 aa10.56□□□□□ -0.72
PVT1-207ENST00000518528 NCK2O43639 380 aa10.56□□□□□ -0.72
PVT1-207ENST00000518528 ST18O60284 1047 aa10.56□□□□□ -0.72
PVT1-207ENST00000518528 APPP05067 770 aa10.56□□□□□ -0.72
PVT1-207ENST00000518528 MCCP23508 829 aa10.56□□□□□ -0.72
PVT1-207ENST00000518528 PDE4DQ08499 809 aa10.56□□□□□ -0.72
PVT1-207ENST00000518528 PKN1Q16512 942 aa10.56□□□□□ -0.72
PVT1-207ENST00000518528 EP400NLQ6ZTU2 488 aa10.56□□□□□ -0.72
PVT1-207ENST00000518528 LRRC8DQ7L1W4 858 aa10.56□□□□□ -0.72
PVT1-207ENST00000518528 NEDD1Q8NHV4 660 aa10.56□□□□□ -0.72
PVT1-207ENST00000518528 MRPL38Q96DV4 380 aaKnown RBP10.56□□□□□ -0.72
PVT1-207ENST00000518528 SAMD11Q96NU1 681 aa10.56□□□□□ -0.72
PVT1-207ENST00000518528 POP1Q99575 1024 aaKnown RBP10.56□□□□□ -0.72
PVT1-207ENST00000518528 PRRX2Q99811 253 aa10.56□□□□□ -0.72
PVT1-207ENST00000518528 NACAP1Q9BZK3 213 aa10.56□□□□□ -0.72
PVT1-207ENST00000518528 INSL6Q9Y581 213 aa10.56□□□□□ -0.72
PVT1-207ENST00000518528 MYO5AQ9Y4I1 1855 aaKnown RBP10.55□□□□□ -0.72
PVT1-207ENST00000518528 PTPDC1A2A3K4 754 aa10.55□□□□□ -0.72
PVT1-207ENST00000518528 A6NJR5 290 aa10.55□□□□□ -0.72
PVT1-207ENST00000518528 GSG1L2A8MUP6 293 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms