RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 NCOA7Q8NI08 942 aa12.33□□□□□ -0.44
SPIDR-205ENST00000518060 TRIM43Q96BQ3 446 aaPredicted RBP12.33□□□□□ -0.44
SPIDR-205ENST00000518060 RBM8AQ9Y5S9 174 aaKnown RBP12.33□□□□□ -0.44
SPIDR-205ENST00000518060 B4DLN1 442 aa12.32□□□□□ -0.44
SPIDR-205ENST00000518060 KLRF2D3W0D1 207 aa12.32□□□□□ -0.44
SPIDR-205ENST00000518060 E7EWF7 191 aa12.32□□□□□ -0.44
SPIDR-205ENST00000518060 MRPL12P52815 198 aaKnown RBP12.32□□□□□ -0.44
SPIDR-205ENST00000518060 PPP2R5BQ15173 497 aa12.32□□□□□ -0.44
SPIDR-205ENST00000518060 TMEM67Q5HYA8 995 aa12.32□□□□□ -0.44
SPIDR-205ENST00000518060 IQSEC1Q6DN90 963 aa12.32□□□□□ -0.44
SPIDR-205ENST00000518060 CCSAPQ6IQ19 270 aaPredicted RBP12.32□□□□□ -0.44
SPIDR-205ENST00000518060 TAPT1Q6NXT6 567 aa12.32□□□□□ -0.44
SPIDR-205ENST00000518060 CENPQQ7L2Z9 268 aaPredicted RBP12.32□□□□□ -0.44
SPIDR-205ENST00000518060 MCF2L2Q86YR7 1114 aa12.32□□□□□ -0.44
SPIDR-205ENST00000518060 STAG2Q8N3U4 1231 aa12.32□□□□□ -0.44
SPIDR-205ENST00000518060 WDR11Q9BZH6 1224 aa12.32□□□□□ -0.44
SPIDR-205ENST00000518060 ANO2Q9NQ90 1003 aa12.32□□□□□ -0.44
SPIDR-205ENST00000518060 GNEQ9Y223 722 aaKnown RBP12.32□□□□□ -0.44
SPIDR-205ENST00000518060 MRPL11Q9Y3B7 192 aaKnown RBP12.32□□□□□ -0.44
SPIDR-205ENST00000518060 TAF6LQ9Y6J9 622 aa12.32□□□□□ -0.44
SPIDR-205ENST00000518060 ELP1O95163 1332 aa12.32□□□□□ -0.44
SPIDR-205ENST00000518060 MROH7Q68CQ1 1323 aa12.32□□□□□ -0.44
SPIDR-205ENST00000518060 MCM3APO60318 1980 aa12.31□□□□□ -0.44
SPIDR-205ENST00000518060 TLR3O15455 904 aaKnown RBP12.31□□□□□ -0.44
SPIDR-205ENST00000518060 MYL3P08590 195 aa12.31□□□□□ -0.44
SPIDR-205ENST00000518060 SEC23AQ15436 765 aa12.31□□□□□ -0.44
SPIDR-205ENST00000518060 LRIT3Q3SXY7 679 aa12.31□□□□□ -0.44
SPIDR-205ENST00000518060 TMEM63BQ5T3F8 832 aa12.31□□□□□ -0.44
SPIDR-205ENST00000518060 CASC1Q6TDU7 716 aa12.31□□□□□ -0.44
SPIDR-205ENST00000518060 STOX1Q6ZVD7 989 aa12.31□□□□□ -0.44
SPIDR-205ENST00000518060 CATIPQ7Z7H3 387 aa12.31□□□□□ -0.44
SPIDR-205ENST00000518060 OR6J1Q8NGC5 347 aa12.31□□□□□ -0.44
SPIDR-205ENST00000518060 PIBF1Q8WXW3 757 aa12.31□□□□□ -0.44
SPIDR-205ENST00000518060 JMJD4Q9H9V9 463 aa12.31□□□□□ -0.44
SPIDR-205ENST00000518060 SMCHD1A6NHR9 2005 aa12.31□□□□□ -0.44
SPIDR-205ENST00000518060 ARVCFO00192 962 aa12.3□□□□□ -0.44
SPIDR-205ENST00000518060 CTAGE5O15320 804 aa12.3□□□□□ -0.44
SPIDR-205ENST00000518060 CFBP00751 764 aa12.3□□□□□ -0.44
SPIDR-205ENST00000518060 CHMP4BP1P59074 171 aa12.3□□□□□ -0.44
SPIDR-205ENST00000518060 FPGSQ05932 587 aa12.3□□□□□ -0.44
SPIDR-205ENST00000518060 FAAP100Q0VG06 881 aa12.3□□□□□ -0.44
SPIDR-205ENST00000518060 NFXL1Q6ZNB6 911 aa12.3□□□□□ -0.44
SPIDR-205ENST00000518060 Q7L0L9 218 aa12.3□□□□□ -0.44
SPIDR-205ENST00000518060 ANKRD33Q7Z3H0 272 aa12.3□□□□□ -0.44
SPIDR-205ENST00000518060 DEFB123Q8N688 67 aa12.3□□□□□ -0.44
SPIDR-205ENST00000518060 DNERQ8NFT8 737 aa12.3□□□□□ -0.44
SPIDR-205ENST00000518060 MORC4Q8TE76 937 aa12.3□□□□□ -0.44
SPIDR-205ENST00000518060 TOX2Q96NM4 488 aa12.3□□□□□ -0.44
SPIDR-205ENST00000518060 ESYT1Q9BSJ8 1104 aa12.3□□□□□ -0.44
SPIDR-205ENST00000518060 AMNQ9BXJ7 453 aa12.3□□□□□ -0.44
SPIDR-205ENST00000518060 PPP1R12CQ9BZL4 782 aa12.3□□□□□ -0.44
SPIDR-205ENST00000518060 SENP2Q9HC62 589 aa12.3□□□□□ -0.44
SPIDR-205ENST00000518060 GPHNQ9NQX3 736 aaPredicted RBP12.3□□□□□ -0.44
SPIDR-205ENST00000518060 MAD2L2Q9UI95 211 aa12.3□□□□□ -0.44
SPIDR-205ENST00000518060 LRRC37A2A6NM11 1700 aa12.3□□□□□ -0.44
SPIDR-205ENST00000518060 DNAH12Q6ZR08 3092 aa12.29□□□□□ -0.44
SPIDR-205ENST00000518060 LOC102724159A0A0B4J2E5 919 aa12.29□□□□□ -0.44
SPIDR-205ENST00000518060 ZBTB5O15062 677 aa12.29□□□□□ -0.44
SPIDR-205ENST00000518060 KIAA0355O15063 1070 aa12.29□□□□□ -0.44
SPIDR-205ENST00000518060 CABYRO75952 493 aa12.29□□□□□ -0.44
SPIDR-205ENST00000518060 TXNP10599 105 aaKnown RBP12.29□□□□□ -0.44
SPIDR-205ENST00000518060 EIF2AK2P19525 551 aaKnown RBP12.29□□□□□ -0.44
SPIDR-205ENST00000518060 ITGB8P26012 769 aa12.29□□□□□ -0.44
SPIDR-205ENST00000518060 CPT1AP50416 773 aa12.29□□□□□ -0.44
SPIDR-205ENST00000518060 PSMC6P62333 389 aa12.29□□□□□ -0.44
SPIDR-205ENST00000518060 ITGA7Q13683 1181 aa12.29□□□□□ -0.44
SPIDR-205ENST00000518060 GRM4Q14833 912 aa12.29□□□□□ -0.44
SPIDR-205ENST00000518060 PWP2Q15269 919 aaKnown RBP12.29□□□□□ -0.44
SPIDR-205ENST00000518060 SHHQ15465 462 aa12.29□□□□□ -0.44
SPIDR-205ENST00000518060 DUSP28Q4G0W2 176 aa12.29□□□□□ -0.44
SPIDR-205ENST00000518060 BRDTQ58F21 947 aaPredicted RBP12.29□□□□□ -0.44
SPIDR-205ENST00000518060 C9orf50Q5SZB4 431 aa12.29□□□□□ -0.44
SPIDR-205ENST00000518060 ARHGEF16Q5VV41 709 aa12.29□□□□□ -0.44
SPIDR-205ENST00000518060 SEPT14Q6ZU15 432 aa12.29□□□□□ -0.44
SPIDR-205ENST00000518060 SYTL5Q8TDW5 730 aaPredicted RBP12.29□□□□□ -0.44
SPIDR-205ENST00000518060 NSUN6Q8TEA1 469 aaKnown RBP12.29□□□□□ -0.44
SPIDR-205ENST00000518060 SCFD2Q8WU76 684 aa12.29□□□□□ -0.44
SPIDR-205ENST00000518060 TBC1D5Q92609 795 aa12.29□□□□□ -0.44
SPIDR-205ENST00000518060 MAP4K1Q92918 833 aa12.29□□□□□ -0.44
SPIDR-205ENST00000518060 RNPC3Q96LT9 517 aaKnown RBP12.29□□□□□ -0.44
SPIDR-205ENST00000518060 TAAR1Q96RJ0 339 aa12.29□□□□□ -0.44
SPIDR-205ENST00000518060 RMDN3Q96TC7 470 aa12.29□□□□□ -0.44
SPIDR-205ENST00000518060 PCDHA1Q9Y5I3 950 aa12.29□□□□□ -0.44
SPIDR-205ENST00000518060 PRC1O43663 620 aa12.28□□□□□ -0.44
SPIDR-205ENST00000518060 TTLL4Q14679 1199 aa12.28□□□□□ -0.44
SPIDR-205ENST00000518060 FAM47CQ5HY64 1035 aa12.28□□□□□ -0.44
SPIDR-205ENST00000518060 FAM126BQ8IXS8 530 aa12.28□□□□□ -0.44
SPIDR-205ENST00000518060 MB21D2Q8IYB1 491 aaPredicted RBP12.28□□□□□ -0.44
SPIDR-205ENST00000518060 RGS22Q8NE09 1264 aa12.28□□□□□ -0.44
SPIDR-205ENST00000518060 CTCFLQ8NI51 663 aaPredicted RBP12.28□□□□□ -0.44
SPIDR-205ENST00000518060 COPS5Q92905 334 aa12.28□□□□□ -0.44
SPIDR-205ENST00000518060 CCDC136Q96JN2 1154 aa12.28□□□□□ -0.44
SPIDR-205ENST00000518060 PIGSQ96S52 555 aa12.28□□□□□ -0.44
SPIDR-205ENST00000518060 MYL10Q9BUA6 226 aa12.28□□□□□ -0.44
SPIDR-205ENST00000518060 LSG1Q9H089 658 aaKnown RBP12.28□□□□□ -0.44
SPIDR-205ENST00000518060 POLR3EQ9NVU0 708 aa12.28□□□□□ -0.44
SPIDR-205ENST00000518060 COL20A1Q9P218 1284 aa12.28□□□□□ -0.44
SPIDR-205ENST00000518060 Q9Y3F1 56 aa12.28□□□□□ -0.44
SPIDR-205ENST00000518060 LAMA3Q16787 3333 aa12.28□□□□□ -0.44
SPIDR-205ENST00000518060 LTBP2Q14767 1821 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms