RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 CHST12Q9NRB3 414 aa3.34□□□□□ -1.88
SKP1-204ENST00000517691 FAM13BQ9NYF5 915 aa3.34□□□□□ -1.88
SKP1-204ENST00000517691 SFMBT1Q9UHJ3 866 aa3.34□□□□□ -1.88
SKP1-204ENST00000517691 HCN2Q9UL51 889 aa3.34□□□□□ -1.88
SKP1-204ENST00000517691 ZNRF3Q9ULT6 936 aa3.34□□□□□ -1.88
SKP1-204ENST00000517691 LEMD3Q9Y2U8 911 aa3.34□□□□□ -1.88
SKP1-204ENST00000517691 GPC6Q9Y625 555 aaPredicted RBP3.34□□□□□ -1.88
SKP1-204ENST00000517691 COMMD10Q9Y6G5 202 aa3.34□□□□□ -1.88
SKP1-204ENST00000517691 TNRC6CQ9HCJ0 1690 aaKnown RBP3.34□□□□□ -1.88
SKP1-204ENST00000517691 KDM2BQ8NHM5 1336 aa3.33□□□□□ -1.88
SKP1-204ENST00000517691 PNMA6EA0A0J9YXQ4 647 aa3.33□□□□□ -1.88
SKP1-204ENST00000517691 EYA2O00167 538 aa3.33□□□□□ -1.88
SKP1-204ENST00000517691 PPP1R12AO14974 1030 aaPredicted RBP3.33□□□□□ -1.88
SKP1-204ENST00000517691 ECE2O60344 883 aa3.33□□□□□ -1.88
SKP1-204ENST00000517691 SURF6O75683 361 aaKnown RBP3.33□□□□□ -1.88
SKP1-204ENST00000517691 DDNO94850 711 aaPredicted RBP3.33□□□□□ -1.88
SKP1-204ENST00000517691 LDHAP00338 332 aaKnown RBP3.33□□□□□ -1.88
SKP1-204ENST00000517691 HOXB4P17483 251 aaPredicted RBP3.33□□□□□ -1.88
SKP1-204ENST00000517691 MSX1P28360 303 aa3.33□□□□□ -1.88
SKP1-204ENST00000517691 IL15P40933 162 aaPredicted RBP3.33□□□□□ -1.88
SKP1-204ENST00000517691 RFX5P48382 616 aaPredicted RBP3.33□□□□□ -1.88
SKP1-204ENST00000517691 PTPN12Q05209 780 aaKnown RBP3.33□□□□□ -1.88
SKP1-204ENST00000517691 KIAA2012Q0VF49 1180 aa3.33□□□□□ -1.88
SKP1-204ENST00000517691 TNIP1Q15025 636 aa3.33□□□□□ -1.88
SKP1-204ENST00000517691 CAVIN4Q5BKX8 364 aa3.33□□□□□ -1.88
SKP1-204ENST00000517691 LRRC69Q6ZNQ3 347 aa3.33□□□□□ -1.88
SKP1-204ENST00000517691 BTLAQ7Z6A9 289 aa3.33□□□□□ -1.88
SKP1-204ENST00000517691 FERMT3Q86UX7 667 aa3.33□□□□□ -1.88
SKP1-204ENST00000517691 WDR75Q8IWA0 830 aaKnown RBP3.33□□□□□ -1.88
SKP1-204ENST00000517691 C16orf71Q8IYS4 520 aaPredicted RBP3.33□□□□□ -1.88
SKP1-204ENST00000517691 PGBD3Q8N328 593 aa3.33□□□□□ -1.88
SKP1-204ENST00000517691 EDARADDQ8WWZ3 215 aa3.33□□□□□ -1.88
SKP1-204ENST00000517691 C8orf48Q96LL4 319 aa3.33□□□□□ -1.88
SKP1-204ENST00000517691 NEUROD6Q96NK8 337 aa3.33□□□□□ -1.88
SKP1-204ENST00000517691 CRBNQ96SW2 442 aa3.33□□□□□ -1.88
SKP1-204ENST00000517691 C12orf49Q9H741 205 aa3.33□□□□□ -1.88
SKP1-204ENST00000517691 SRA1Q9HD15 236 aaKnown RBP3.33□□□□□ -1.88
SKP1-204ENST00000517691 ZBTB40Q9NUA8 1239 aa3.33□□□□□ -1.88
SKP1-204ENST00000517691 PCMTD2Q9NV79 361 aa3.33□□□□□ -1.88
SKP1-204ENST00000517691 FBXO9Q9UK97 447 aaPredicted RBP3.33□□□□□ -1.88
SKP1-204ENST00000517691 ANKRD31Q8N7Z5 1873 aa3.33□□□□□ -1.88
SKP1-204ENST00000517691 ZNF541Q9H0D2 1346 aa3.33□□□□□ -1.88
SKP1-204ENST00000517691 KIF13BQ9NQT8 1826 aa3.33□□□□□ -1.88
SKP1-204ENST00000517691 GLTPD2A6NH11 291 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 FZD9O00144 591 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 HMMRO75330 724 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 CIAO1O76071 339 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 PDE8BO95263 885 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 IFIT1P09914 478 aaKnown RBP3.32□□□□□ -1.88
SKP1-204ENST00000517691 SLC5A1P13866 664 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 ATF4P18848 351 aaPredicted RBP3.32□□□□□ -1.88
SKP1-204ENST00000517691 MX2P20592 715 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 KLRK1P26718 216 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 GYG1P46976 350 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 ARSDP51689 593 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 CXCL9Q07325 125 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 TFCP2Q12800 502 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 DHX8Q14562 1220 aaKnown RBP3.32□□□□□ -1.88
SKP1-204ENST00000517691 PUM3Q15397 648 aaKnown RBP3.32□□□□□ -1.88
SKP1-204ENST00000517691 HIF1AQ16665 826 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 SYCP2LQ5T4T6 812 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 CIAPIN1Q6FI81 312 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 PDE12Q6L8Q7 609 aaKnown RBP3.32□□□□□ -1.88
SKP1-204ENST00000517691 CEP85Q6P2H3 762 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 ATG9AQ7Z3C6 839 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 ZNF804AQ7Z570 1209 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 TXNRD3Q86VQ6 643 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 RPAP2Q8IXW5 612 aaPredicted RBP3.32□□□□□ -1.88
SKP1-204ENST00000517691 CMTR1Q8N1G2 835 aaKnown RBP3.32□□□□□ -1.88
SKP1-204ENST00000517691 POU5F2Q8N7G0 328 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 CRELD1Q96HD1 420 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 SCYL1Q96KG9 808 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 ZNF512BQ96KM6 892 aaPredicted RBP3.32□□□□□ -1.88
SKP1-204ENST00000517691 SRPK1Q96SB4 655 aaKnown RBP3.32□□□□□ -1.88
SKP1-204ENST00000517691 COA1Q9GZY4 146 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 ELP3Q9H9T3 547 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 NEUROD4Q9HD90 331 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 NMRK2Q9NPI5 230 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 COPRSQ9NQ92 184 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 KCNQ5Q9NR82 932 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 FANCLQ9NW38 375 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 MAP3K20Q9NYL2 800 aaKnown RBP3.32□□□□□ -1.88
SKP1-204ENST00000517691 TMEM63CQ9P1W3 806 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 AKAP2Q9Y2D5 859 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 COL11A2P13942 1736 aaPredicted RBP3.32□□□□□ -1.88
SKP1-204ENST00000517691 SLX4Q8IY92 1834 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 ANKRD36CQ5JPF3 1778 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 A0A1W2PNR3 127 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 FAM221BA6H8Z2 402 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 YDJCA8MPS7 323 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 PSMD14O00487 310 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 POLR3DP05423 398 aaPredicted RBP3.32□□□□□ -1.88
SKP1-204ENST00000517691 VEGFAP15692 232 aaPredicted RBP3.32□□□□□ -1.88
SKP1-204ENST00000517691 EIF4BP23588 611 aaKnown RBP3.32□□□□□ -1.88
SKP1-204ENST00000517691 HIBADHP31937 336 aaKnown RBP3.32□□□□□ -1.88
SKP1-204ENST00000517691 GNALP38405 381 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 GMPSP49915 693 aaPredicted RBP3.32□□□□□ -1.88
SKP1-204ENST00000517691 TIMM10P62072 90 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 CHAF1AQ13111 956 aaPredicted RBP3.32□□□□□ -1.88
SKP1-204ENST00000517691 MTX1Q13505 466 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms