RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 CXCL17Q6UXB2 119 aa10.22□□□□□ -0.77
PABPC1-202ENST00000517403 ANKRD33Q7Z3H0 272 aa10.22□□□□□ -0.77
PABPC1-202ENST00000517403 ANKRD35Q8N283 1001 aa10.22□□□□□ -0.77
PABPC1-202ENST00000517403 CHST13Q8NET6 341 aa10.22□□□□□ -0.77
PABPC1-202ENST00000517403 MORC4Q8TE76 937 aa10.22□□□□□ -0.77
PABPC1-202ENST00000517403 COPS5Q92905 334 aa10.22□□□□□ -0.77
PABPC1-202ENST00000517403 RILPL2Q969X0 211 aa10.22□□□□□ -0.77
PABPC1-202ENST00000517403 TRERF1Q96PN7 1200 aa10.22□□□□□ -0.77
PABPC1-202ENST00000517403 OSBPL3Q9H4L5 887 aa10.22□□□□□ -0.77
PABPC1-202ENST00000517403 ISY1Q9ULR0 285 aaKnown RBP10.22□□□□□ -0.77
PABPC1-202ENST00000517403 CNPY2Q9Y2B0 182 aa10.22□□□□□ -0.77
PABPC1-202ENST00000517403 CHD7Q9P2D1 2997 aa10.22□□□□□ -0.77
PABPC1-202ENST00000517403 MYH6P13533 1939 aa10.21□□□□□ -0.77
PABPC1-202ENST00000517403 PPP1R11O60927 126 aaPredicted RBP10.21□□□□□ -0.77
PABPC1-202ENST00000517403 ARIH2O95376 493 aa10.21□□□□□ -0.77
PABPC1-202ENST00000517403 CD4P01730 458 aa10.21□□□□□ -0.77
PABPC1-202ENST00000517403 ICAM1P05362 532 aa10.21□□□□□ -0.77
PABPC1-202ENST00000517403 COPB2P35606 906 aa10.21□□□□□ -0.77
PABPC1-202ENST00000517403 PBX2P40425 430 aa10.21□□□□□ -0.77
PABPC1-202ENST00000517403 ZNF543Q08ER8 600 aa10.21□□□□□ -0.77
PABPC1-202ENST00000517403 BAATQ14032 418 aaPredicted RBP10.21□□□□□ -0.77
PABPC1-202ENST00000517403 SYDE2Q5VT97 1194 aa10.21□□□□□ -0.77
PABPC1-202ENST00000517403 NSMFQ6X4W1 530 aa10.21□□□□□ -0.77
PABPC1-202ENST00000517403 FAM160B2Q86V87 743 aa10.21□□□□□ -0.77
PABPC1-202ENST00000517403 USP38Q8NB14 1042 aa10.21□□□□□ -0.77
PABPC1-202ENST00000517403 SLC43A3Q8NBI5 491 aa10.21□□□□□ -0.77
PABPC1-202ENST00000517403 ARID3AQ99856 593 aa10.21□□□□□ -0.77
PABPC1-202ENST00000517403 UBA5Q9GZZ9 404 aa10.21□□□□□ -0.77
PABPC1-202ENST00000517403 WNT8AQ9H1J5 351 aa10.21□□□□□ -0.77
PABPC1-202ENST00000517403 STARD7Q9NQZ5 370 aa10.21□□□□□ -0.77
PABPC1-202ENST00000517403 SLC5A4Q9NY91 659 aa10.21□□□□□ -0.77
PABPC1-202ENST00000517403 FAM184BQ9ULE4 1060 aa10.21□□□□□ -0.77
PABPC1-202ENST00000517403 CCPG1Q9ULG6 757 aa10.21□□□□□ -0.77
PABPC1-202ENST00000517403 KIAA1217Q5T5P2 1943 aa10.21□□□□□ -0.78
PABPC1-202ENST00000517403 TRIM6-TRIM34B2RNG4 842 aa10.2□□□□□ -0.78
PABPC1-202ENST00000517403 B4E1Z4 1266 aa10.2□□□□□ -0.78
PABPC1-202ENST00000517403 ACRP10323 421 aa10.2□□□□□ -0.78
PABPC1-202ENST00000517403 ALDH5A1P51649 535 aaPredicted RBP10.2□□□□□ -0.78
PABPC1-202ENST00000517403 PTH1RQ03431 593 aa10.2□□□□□ -0.78
PABPC1-202ENST00000517403 IKQ13123 557 aaPredicted RBP10.2□□□□□ -0.78
PABPC1-202ENST00000517403 AKNAD1Q5T1N1 836 aa10.2□□□□□ -0.78
PABPC1-202ENST00000517403 GPR153Q6NV75 609 aa10.2□□□□□ -0.78
PABPC1-202ENST00000517403 CWC27Q6UX04 472 aaKnown RBP10.2□□□□□ -0.78
PABPC1-202ENST00000517403 STOX1Q6ZVD7 989 aa10.2□□□□□ -0.78
PABPC1-202ENST00000517403 CYB5R4Q7L1T6 521 aa10.2□□□□□ -0.78
PABPC1-202ENST00000517403 RNF180Q86T96 592 aa10.2□□□□□ -0.78
PABPC1-202ENST00000517403 TLK2Q86UE8 772 aa10.2□□□□□ -0.78
PABPC1-202ENST00000517403 MSL3Q8N5Y2 521 aaKnown RBP10.2□□□□□ -0.78
PABPC1-202ENST00000517403 DCAF4Q8WV16 495 aa10.2□□□□□ -0.78
PABPC1-202ENST00000517403 MYLIPQ8WY64 445 aa10.2□□□□□ -0.78
PABPC1-202ENST00000517403 CTAGE1Q96RT6 745 aa10.2□□□□□ -0.78
PABPC1-202ENST00000517403 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.2□□□□□ -0.78
PABPC1-202ENST00000517403 PPP1R12CQ9BZL4 782 aa10.2□□□□□ -0.78
PABPC1-202ENST00000517403 ABHD16BQ9H3Z7 469 aa10.2□□□□□ -0.78
PABPC1-202ENST00000517403 DOCK5Q9H7D0 1870 aa10.2□□□□□ -0.78
PABPC1-202ENST00000517403 TCP11L1Q9NUJ3 509 aa10.2□□□□□ -0.78
PABPC1-202ENST00000517403 CXXC1Q9P0U4 656 aaPredicted RBP10.2□□□□□ -0.78
PABPC1-202ENST00000517403 STXBP5LQ9Y2K9 1186 aa10.2□□□□□ -0.78
PABPC1-202ENST00000517403 FARP1Q9Y4F1 1045 aaPredicted RBP10.2□□□□□ -0.78
PABPC1-202ENST00000517403 COL4A4P53420 1690 aaPredicted RBP10.19□□□□□ -0.78
PABPC1-202ENST00000517403 HAX1O00165 279 aa10.19□□□□□ -0.78
PABPC1-202ENST00000517403 B4GALT4O60513 344 aa10.19□□□□□ -0.78
PABPC1-202ENST00000517403 KDM4AO75164 1064 aa10.19□□□□□ -0.78
PABPC1-202ENST00000517403 ARHGEF15O94989 841 aa10.19□□□□□ -0.78
PABPC1-202ENST00000517403 TOP1P11387 765 aaKnown RBP10.19□□□□□ -0.78
PABPC1-202ENST00000517403 CSF2RAP15509 400 aa10.19□□□□□ -0.78
PABPC1-202ENST00000517403 EDNRBP24530 442 aa10.19□□□□□ -0.78
PABPC1-202ENST00000517403 CYP2C18P33260 490 aa10.19□□□□□ -0.78
PABPC1-202ENST00000517403 RASIP1Q5U651 963 aa10.19□□□□□ -0.78
PABPC1-202ENST00000517403 STAG2Q8N3U4 1231 aa10.19□□□□□ -0.78
PABPC1-202ENST00000517403 ENAHQ8N8S7 591 aaPredicted RBP10.19□□□□□ -0.78
PABPC1-202ENST00000517403 CDX2Q99626 313 aaPredicted RBP10.19□□□□□ -0.78
PABPC1-202ENST00000517403 LBHD1Q9BQE6 289 aaPredicted RBP10.19□□□□□ -0.78
PABPC1-202ENST00000517403 TSEN34Q9BSV6 310 aaKnown RBP10.19□□□□□ -0.78
PABPC1-202ENST00000517403 TRPV6Q9H1D0 765 aa10.19□□□□□ -0.78
PABPC1-202ENST00000517403 TOMM22Q9NS69 142 aa10.19□□□□□ -0.78
PABPC1-202ENST00000517403 SUPT16HQ9Y5B9 1047 aaKnown RBP10.19□□□□□ -0.78
PABPC1-202ENST00000517403 TET1Q8NFU7 2136 aa10.18□□□□□ -0.78
PABPC1-202ENST00000517403 MOXD2PA6NHM9 499 aa10.18□□□□□ -0.78
PABPC1-202ENST00000517403 ARVCFO00192 962 aa10.18□□□□□ -0.78
PABPC1-202ENST00000517403 MLLT3P42568 568 aaPredicted RBP10.18□□□□□ -0.78
PABPC1-202ENST00000517403 RPS6P62753 249 aaKnown RBP10.18□□□□□ -0.78
PABPC1-202ENST00000517403 TNFAIP2Q03169 654 aa10.18□□□□□ -0.78
PABPC1-202ENST00000517403 SEC23AQ15436 765 aa10.18□□□□□ -0.78
PABPC1-202ENST00000517403 TCTN1Q2MV58 587 aa10.18□□□□□ -0.78
PABPC1-202ENST00000517403 GNASQ5JWF2 1037 aa10.18□□□□□ -0.78
PABPC1-202ENST00000517403 TMEM240Q5SV17 173 aa10.18□□□□□ -0.78
PABPC1-202ENST00000517403 SPRED2Q7Z698 418 aa10.18□□□□□ -0.78
PABPC1-202ENST00000517403 GPIHBP1Q8IV16 184 aa10.18□□□□□ -0.78
PABPC1-202ENST00000517403 CHURC1Q8WUH1 139 aa10.18□□□□□ -0.78
PABPC1-202ENST00000517403 ZNF287Q9HBT7 754 aa10.18□□□□□ -0.78
PABPC1-202ENST00000517403 PRDM6Q9NQX0 595 aa10.18□□□□□ -0.78
PABPC1-202ENST00000517403 GPHNQ9NQX3 736 aaPredicted RBP10.18□□□□□ -0.78
PABPC1-202ENST00000517403 TMEM39AQ9NV64 488 aa10.18□□□□□ -0.78
PABPC1-202ENST00000517403 FBXO40Q9UH90 709 aa10.18□□□□□ -0.78
PABPC1-202ENST00000517403 TNKSO95271 1327 aa10.17□□□□□ -0.78
PABPC1-202ENST00000517403 DYNC1LI2O43237 492 aaPredicted RBP10.17□□□□□ -0.78
PABPC1-202ENST00000517403 SLC3A2P08195 630 aaKnown RBP10.17□□□□□ -0.78
PABPC1-202ENST00000517403 CALML3P27482 149 aa10.17□□□□□ -0.78
PABPC1-202ENST00000517403 FXR2P51116 673 aaKnown RBP eCLIP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms