RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 PQBP1O60828 265 aaKnown RBP3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 GAS7O60861 476 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 RNASEH2AO75792 299 aaKnown RBP3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 HSP90AA1P07900 732 aaKnown RBP3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ZKSCAN1P17029 563 aaPredicted RBP3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CHKAP35790 457 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 KPNA1P52294 538 aaPredicted RBP3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 YARSP54577 528 aaKnown RBP3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CABP4P57796 275 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CTBSQ01459 385 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 RASSF7Q02833 373 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 MAP4K2Q12851 820 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 DBN1Q16643 649 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 RRP12Q5JTH9 1297 aaKnown RBP3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 SLC35F1Q5T1Q4 408 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ELMSAN1Q6PJG2 1045 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 LDHAL6AQ6ZMR3 332 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 MMS22LQ6ZRQ5 1243 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 FAM43BQ6ZT52 329 aaPredicted RBP3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 SYT9Q86SS6 491 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 SLC41A1Q8IVJ1 513 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 SLFN12Q8IYM2 578 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ARHGEF39Q8N4T4 335 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 NKAPQ8N5F7 415 aaKnown RBP3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 FAM156AQ8NDB6 213 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 PPHLN1Q8NEY8 458 aaKnown RBP3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ENOX1Q8TC92 643 aaKnown RBP3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 XAGE3Q8WTP9 111 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 SMARCC1Q92922 1105 aaPredicted RBP3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CCDC74BQ96LY2 380 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 TEKT5Q96M29 485 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 TBCBQ99426 244 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ACO2Q99798 780 aaKnown RBP3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 LPIN3Q9BQK8 851 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CARD10Q9BWT7 1032 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 NOL6Q9H6R4 1146 aaKnown RBP3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 JADE2Q9NQC1 790 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 PICK1Q9NRD5 415 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 DISC1Q9NRI5 854 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 KRT82Q9NSB4 513 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 C1orf112Q9NSG2 853 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 WHRNQ9P202 907 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ZNF69Q9UC07 566 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 HDAC9Q9UKV0 1011 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 SLC6A14Q9UN76 642 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 INVSQ9Y283 1065 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ZKSCAN5Q9Y2L8 839 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 PTPN22Q9Y2R2 807 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 GPR55Q9Y2T6 319 aaPredicted RBP3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 FAM177BA6PVY3 158 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 SOBPA7XYQ1 873 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 LINC01387J3KSC0 135 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 AQP7O14520 342 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 TGM5O43548 720 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 MSCO60682 206 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ULK1O75385 1050 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CKMP06732 381 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 RRM1P23921 792 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 IREB2P48200 963 aaKnown RBP3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 PCBP4P57723 403 aaKnown RBP3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ZNF445P59923 1031 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 GPSM2P81274 684 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 RING1Q06587 406 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 C19orf57Q0VDD7 668 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 LBRQ14739 615 aaKnown RBP3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 PUM3Q15397 648 aaKnown RBP3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ELF2Q15723 593 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 DPY19L1Q2PZI1 675 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 KIF4BQ2VIQ3 1234 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ZC3H12AQ5D1E8 599 aaKnown RBP3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ZBTB37Q5TC79 503 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 BROXQ5VW32 411 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 JAKMIP3Q5VZ66 844 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CREB3L3Q68CJ9 461 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 STYK1Q6J9G0 422 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CCDC149Q6ZUS6 474 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CHST15Q7LFX5 561 aaPredicted RBP3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 OVCH2Q7RTZ1 564 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 C11orf74Q86VG3 221 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ANKLE2Q86XL3 938 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 KIF18BQ86Y91 864 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 MRPL41Q8IXM3 137 aaKnown RBP3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CISD2Q8N5K1 135 aaKnown RBP3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CCDC89Q8N998 374 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 TGFBRAP1Q8WUH2 860 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 SLC5A5Q92911 643 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 SKA1Q96BD8 255 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 SGCZQ96LD1 299 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ZDHHC15Q96MV8 337 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 WDR18Q9BV38 432 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 PHF20Q9BVI0 1012 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 GTPBP4Q9BZE4 634 aaKnown RBP3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 PRDM6Q9NQX0 595 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 TOPORSQ9NS56 1045 aaPredicted RBP3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 B4GALT6Q9UBX8 382 aa3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 TPX2Q9ULW0 747 aaKnown RBP3.3□□□□□ -1.88
SCARNA11.3-201ENST00000517276 PCDHGC5Q9Y5F6 944 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms