RNA–Protein interactions for RNA: ENST00000517211.2

RN7SKP40-201, Transcript of RNA, 7SK small nuclear pseudogene 40, humanhuman

BASIC

Gene RN7SKP40, Length 242 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP40-201ENST00000517211 TFE3P19532 575 aaPredicted RBP3.93□□□□□ -1.78
RN7SKP40-201ENST00000517211 RPL6Q02878 288 aaKnown RBP3.93□□□□□ -1.78
RN7SKP40-201ENST00000517211 PTH1RQ03431 593 aa3.93□□□□□ -1.78
RN7SKP40-201ENST00000517211 TMC7Q7Z402 723 aa3.93□□□□□ -1.78
RN7SKP40-201ENST00000517211 PDLIM7Q9NR12 457 aa3.93□□□□□ -1.78
RN7SKP40-201ENST00000517211 PPM1GO15355 546 aaPredicted RBP3.92□□□□□ -1.78
RN7SKP40-201ENST00000517211 C1SP09871 688 aa3.92□□□□□ -1.78
RN7SKP40-201ENST00000517211 USP17L7P0C7H9 530 aa3.92□□□□□ -1.78
RN7SKP40-201ENST00000517211 GBP1P32455 592 aa3.92□□□□□ -1.78
RN7SKP40-201ENST00000517211 MCM7P33993 719 aa3.92□□□□□ -1.78
RN7SKP40-201ENST00000517211 PPP2CBP62714 309 aa3.92□□□□□ -1.78
RN7SKP40-201ENST00000517211 PPP2CAP67775 309 aa3.92□□□□□ -1.78
RN7SKP40-201ENST00000517211 COL10A1Q03692 680 aa3.92□□□□□ -1.78
RN7SKP40-201ENST00000517211 ENOX2Q16206 610 aaKnown RBP3.92□□□□□ -1.78
RN7SKP40-201ENST00000517211 PRR31Q5SQ13 230 aa3.92□□□□□ -1.78
RN7SKP40-201ENST00000517211 NBPF12Q5TAG4 269 aaPredicted RBP3.92□□□□□ -1.78
RN7SKP40-201ENST00000517211 KRTAP5-1Q6L8H4 278 aa3.92□□□□□ -1.78
RN7SKP40-201ENST00000517211 SV2BQ7L1I2 683 aa3.92□□□□□ -1.78
RN7SKP40-201ENST00000517211 LCORQ96JN0 433 aaPredicted RBP3.92□□□□□ -1.78
RN7SKP40-201ENST00000517211 DMRTB1Q96MA1 342 aa3.92□□□□□ -1.78
RN7SKP40-201ENST00000517211 GNRHR2Q96P88 292 aa3.92□□□□□ -1.78
RN7SKP40-201ENST00000517211 GZF1Q9H116 711 aaPredicted RBP3.92□□□□□ -1.78
RN7SKP40-201ENST00000517211 MEGF9Q9H1U4 602 aa3.92□□□□□ -1.78
RN7SKP40-201ENST00000517211 CHST7Q9NS84 486 aa3.92□□□□□ -1.78
RN7SKP40-201ENST00000517211 REV1Q9UBZ9 1251 aa3.92□□□□□ -1.78
RN7SKP40-201ENST00000517211 FOXS1O43638 330 aa3.91□□□□□ -1.78
RN7SKP40-201ENST00000517211 GLI4P10075 376 aa3.91□□□□□ -1.78
RN7SKP40-201ENST00000517211 EPHB4P54760 987 aa3.91□□□□□ -1.78
RN7SKP40-201ENST00000517211 DAB2P98082 770 aa3.91□□□□□ -1.78
RN7SKP40-201ENST00000517211 FNDC7Q5VTL7 733 aa3.91□□□□□ -1.78
RN7SKP40-201ENST00000517211 AGMOQ6ZNB7 445 aa3.91□□□□□ -1.78
RN7SKP40-201ENST00000517211 CPA5Q8WXQ8 436 aa3.91□□□□□ -1.78
RN7SKP40-201ENST00000517211 ZNF764Q96H86 408 aaPredicted RBP3.91□□□□□ -1.78
RN7SKP40-201ENST00000517211 PSMD1Q99460 953 aa3.91□□□□□ -1.78
RN7SKP40-201ENST00000517211 GFOD1Q9NXC2 390 aa3.91□□□□□ -1.78
RN7SKP40-201ENST00000517211 WWC3Q9ULE0 1092 aa3.91□□□□□ -1.78
RN7SKP40-201ENST00000517211 TTF2Q9UNY4 1162 aaKnown RBP3.91□□□□□ -1.78
RN7SKP40-201ENST00000517211 TLR6Q9Y2C9 796 aa3.91□□□□□ -1.78
RN7SKP40-201ENST00000517211 B4GALT4O60513 344 aa3.9□□□□□ -1.79
RN7SKP40-201ENST00000517211 POLR2BP30876 1174 aaKnown RBP3.9□□□□□ -1.79
RN7SKP40-201ENST00000517211 DSC3Q14574 896 aa3.9□□□□□ -1.79
RN7SKP40-201ENST00000517211 TSNAXIP1Q2TAA8 658 aa3.9□□□□□ -1.79
RN7SKP40-201ENST00000517211 ZNF326Q5BKZ1 582 aaKnown RBP3.9□□□□□ -1.79
RN7SKP40-201ENST00000517211 TICAM2Q86XR7 235 aa3.9□□□□□ -1.79
RN7SKP40-201ENST00000517211 JAMLQ86YT9 394 aa3.9□□□□□ -1.79
RN7SKP40-201ENST00000517211 NTN5Q8WTR8 489 aaPredicted RBP3.9□□□□□ -1.79
RN7SKP40-201ENST00000517211 ADOQ96SZ5 270 aa3.9□□□□□ -1.79
RN7SKP40-201ENST00000517211 MIR1-1HGQ9H1L0 117 aa3.9□□□□□ -1.79
RN7SKP40-201ENST00000517211 SIT1Q9Y3P8 196 aa3.9□□□□□ -1.79
RN7SKP40-201ENST00000517211 GSTM1P09488 218 aa3.89□□□□□ -1.79
RN7SKP40-201ENST00000517211 KRT4P19013 534 aa3.89□□□□□ -1.79
RN7SKP40-201ENST00000517211 LMNB1P20700 586 aa3.89□□□□□ -1.79
RN7SKP40-201ENST00000517211 BMP5P22003 454 aa3.89□□□□□ -1.79
RN7SKP40-201ENST00000517211 BMP8BP34820 402 aa3.89□□□□□ -1.79
RN7SKP40-201ENST00000517211 PRKD1Q15139 912 aaPredicted RBP3.89□□□□□ -1.79
RN7SKP40-201ENST00000517211 SURF1Q15526 300 aa3.89□□□□□ -1.79
RN7SKP40-201ENST00000517211 TSPAN17Q96FV3 270 aa3.89□□□□□ -1.79
RN7SKP40-201ENST00000517211 RBCK1Q9BYM8 510 aa3.89□□□□□ -1.79
RN7SKP40-201ENST00000517211 SEMA4AQ9H3S1 761 aa3.89□□□□□ -1.79
RN7SKP40-201ENST00000517211 MMRN2Q9H8L6 949 aa3.89□□□□□ -1.79
RN7SKP40-201ENST00000517211 POLR3KQ9Y2Y1 108 aaPredicted RBP3.89□□□□□ -1.79
RN7SKP40-201ENST00000517211 ARID4BQ4LE39 1312 aaPredicted RBP3.89□□□□□ -1.79
RN7SKP40-201ENST00000517211 PPP1R11O60927 126 aaPredicted RBP3.88□□□□□ -1.79
RN7SKP40-201ENST00000517211 CLSTN1O94985 981 aa3.88□□□□□ -1.79
RN7SKP40-201ENST00000517211 CYP2C8P10632 490 aa3.88□□□□□ -1.79
RN7SKP40-201ENST00000517211 LIG3P49916 1009 aa3.88□□□□□ -1.79
RN7SKP40-201ENST00000517211 RPS26P62854 115 aaKnown RBP3.88□□□□□ -1.79
RN7SKP40-201ENST00000517211 MRPS21P82921 87 aaKnown RBP3.88□□□□□ -1.79
RN7SKP40-201ENST00000517211 LCE1AQ5T7P2 110 aa3.88□□□□□ -1.79
RN7SKP40-201ENST00000517211 ZKSCAN2Q63HK3 967 aa3.88□□□□□ -1.79
RN7SKP40-201ENST00000517211 BNC2Q6ZN30 1099 aaPredicted RBP3.88□□□□□ -1.79
RN7SKP40-201ENST00000517211 ARHGEF18Q6ZSZ5 1173 aa3.88□□□□□ -1.79
RN7SKP40-201ENST00000517211 USP48Q86UV5 1035 aa3.88□□□□□ -1.79
RN7SKP40-201ENST00000517211 NAT16Q8N8M0 369 aa3.88□□□□□ -1.79
RN7SKP40-201ENST00000517211 KYQ8NBH2 561 aa3.88□□□□□ -1.79
RN7SKP40-201ENST00000517211 USTQ9Y2C2 406 aa3.88□□□□□ -1.79
RN7SKP40-201ENST00000517211 F6X3S4 739 aa3.87□□□□□ -1.79
RN7SKP40-201ENST00000517211 RGS13O14921 159 aa3.87□□□□□ -1.79
RN7SKP40-201ENST00000517211 CCDC85BQ15834 202 aaPredicted RBP3.87□□□□□ -1.79
RN7SKP40-201ENST00000517211 PAPD7Q5XG87 772 aaKnown RBP3.87□□□□□ -1.79
RN7SKP40-201ENST00000517211 Q6ZPA2 131 aa3.87□□□□□ -1.79
RN7SKP40-201ENST00000517211 KBTBD2Q8IY47 623 aa3.87□□□□□ -1.79
RN7SKP40-201ENST00000517211 SLC12A9Q9BXP2 914 aa3.87□□□□□ -1.79
RN7SKP40-201ENST00000517211 SRCIN1Q9C0H9 1055 aa3.87□□□□□ -1.79
RN7SKP40-201ENST00000517211 HTR3BO95264 441 aa3.86□□□□□ -1.79
RN7SKP40-201ENST00000517211 CANXP27824 592 aaKnown RBP3.86□□□□□ -1.79
RN7SKP40-201ENST00000517211 HLA-DQA1Q5Y7H0 255 aa3.86□□□□□ -1.79
RN7SKP40-201ENST00000517211 SLFN13Q68D06 897 aa3.86□□□□□ -1.79
RN7SKP40-201ENST00000517211 TCTN3Q6NUS6 607 aa3.86□□□□□ -1.79
RN7SKP40-201ENST00000517211 MRGPRGQ86SM5 289 aa3.86□□□□□ -1.79
RN7SKP40-201ENST00000517211 CERS3Q8IU89 383 aa3.86□□□□□ -1.79
RN7SKP40-201ENST00000517211 CUX2O14529 1486 aa3.86□□□□□ -1.79
RN7SKP40-201ENST00000517211 U2SURPO15042 1029 aaKnown RBP3.85□□□□□ -1.79
RN7SKP40-201ENST00000517211 CYP1A1P04798 512 aaPredicted RBP3.85□□□□□ -1.79
RN7SKP40-201ENST00000517211 ITGA1P56199 1179 aa3.85□□□□□ -1.79
RN7SKP40-201ENST00000517211 CHMP4BP1P59074 171 aa3.85□□□□□ -1.79
RN7SKP40-201ENST00000517211 PLEKHH3Q7Z736 793 aa3.85□□□□□ -1.79
RN7SKP40-201ENST00000517211 RWDD3Q9Y3V2 267 aa3.85□□□□□ -1.79
RN7SKP40-201ENST00000517211 PATL2C9JE40 543 aaKnown RBP3.84□□□□□ -1.79
RN7SKP40-201ENST00000517211 ZNF28P17035 718 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms