RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 SEC61A2Q9H9S3 476 aa0.6□□□□□ -2.31
RNU6-542P-201ENST00000516405 RXFP1Q9HBX9 757 aa0.6□□□□□ -2.31
RNU6-542P-201ENST00000516405 ZFYVE28Q9HCC9 887 aa0.6□□□□□ -2.31
RNU6-542P-201ENST00000516405 ERVK13-1Q9NX77 482 aa0.6□□□□□ -2.31
RNU6-542P-201ENST00000516405 STIM2Q9P246 746 aa0.6□□□□□ -2.31
RNU6-542P-201ENST00000516405 KCNH3Q9ULD8 1083 aa0.6□□□□□ -2.31
RNU6-542P-201ENST00000516405 WDR91A4D1P6 747 aa0.59□□□□□ -2.31
RNU6-542P-201ENST00000516405 CYP2C8P10632 490 aa0.59□□□□□ -2.31
RNU6-542P-201ENST00000516405 DNM1Q05193 864 aaKnown RBP0.59□□□□□ -2.31
RNU6-542P-201ENST00000516405 RAPGEF1Q13905 1077 aa0.59□□□□□ -2.31
RNU6-542P-201ENST00000516405 NAA30Q147X3 362 aaPredicted RBP0.59□□□□□ -2.31
RNU6-542P-201ENST00000516405 HIST2H2BCQ6DN03 193 aa0.59□□□□□ -2.31
RNU6-542P-201ENST00000516405 GSG1LQ6UXU4 331 aa0.59□□□□□ -2.31
RNU6-542P-201ENST00000516405 TMPRSS6Q8IU80 811 aa0.59□□□□□ -2.31
RNU6-542P-201ENST00000516405 HID1Q8IV36 788 aa0.59□□□□□ -2.31
RNU6-542P-201ENST00000516405 GRIN3AQ8TCU5 1115 aa0.59□□□□□ -2.31
RNU6-542P-201ENST00000516405 SNX29Q8TEQ0 813 aa0.59□□□□□ -2.31
RNU6-542P-201ENST00000516405 PCMTD1Q96MG8 357 aaPredicted RBP0.59□□□□□ -2.31
RNU6-542P-201ENST00000516405 UCN2Q96RP3 112 aa0.59□□□□□ -2.31
RNU6-542P-201ENST00000516405 LRFN3Q9BTN0 628 aa0.59□□□□□ -2.31
RNU6-542P-201ENST00000516405 TMEM168Q9H0V1 697 aa0.59□□□□□ -2.31
RNU6-542P-201ENST00000516405 TOR3AQ9H497 397 aa0.59□□□□□ -2.31
RNU6-542P-201ENST00000516405 GDPD2Q9HCC8 539 aa0.59□□□□□ -2.31
RNU6-542P-201ENST00000516405 ABCB6Q9NP58 842 aa0.59□□□□□ -2.31
RNU6-542P-201ENST00000516405 ZKSCAN5Q9Y2L8 839 aa0.59□□□□□ -2.31
RNU6-542P-201ENST00000516405 ZDHHC9Q9Y397 364 aa0.59□□□□□ -2.31
RNU6-542P-201ENST00000516405 A0A1W2PNU3 283 aaPredicted RBP0.58□□□□□ -2.32
RNU6-542P-201ENST00000516405 ATP9BO43861 1147 aa0.58□□□□□ -2.32
RNU6-542P-201ENST00000516405 RAD17O75943 681 aa0.58□□□□□ -2.32
RNU6-542P-201ENST00000516405 HIBADHP31937 336 aaKnown RBP0.58□□□□□ -2.32
RNU6-542P-201ENST00000516405 ABL2P42684 1182 aa0.58□□□□□ -2.32
RNU6-542P-201ENST00000516405 MLLT6P55198 1093 aaPredicted RBP0.58□□□□□ -2.32
RNU6-542P-201ENST00000516405 ITGA1P56199 1179 aa0.58□□□□□ -2.32
RNU6-542P-201ENST00000516405 NFATC3Q12968 1075 aa0.58□□□□□ -2.32
RNU6-542P-201ENST00000516405 MIDNQ504T8 468 aa0.58□□□□□ -2.32
RNU6-542P-201ENST00000516405 KIAA0319Q5VV43 1072 aa0.58□□□□□ -2.32
RNU6-542P-201ENST00000516405 PRAMEF18Q5VWM3 479 aa0.58□□□□□ -2.32
RNU6-542P-201ENST00000516405 BICRALQ6AI39 1079 aa0.58□□□□□ -2.32
RNU6-542P-201ENST00000516405 GPRIN1Q7Z2K8 1008 aa0.58□□□□□ -2.32
RNU6-542P-201ENST00000516405 POLNQ7Z5Q5 900 aa0.58□□□□□ -2.32
RNU6-542P-201ENST00000516405 GALNT12Q8IXK2 581 aa0.58□□□□□ -2.32
RNU6-542P-201ENST00000516405 FAM26EQ8N5C1 309 aa0.58□□□□□ -2.32
RNU6-542P-201ENST00000516405 TTLL6Q8N841 843 aa0.58□□□□□ -2.32
RNU6-542P-201ENST00000516405 LINC00116Q8NCU8 138 aa0.58□□□□□ -2.32
RNU6-542P-201ENST00000516405 TSPAN17Q96FV3 270 aa0.58□□□□□ -2.32
RNU6-542P-201ENST00000516405 TCTN2Q96GX1 697 aa0.58□□□□□ -2.32
RNU6-542P-201ENST00000516405 ARXQ96QS3 562 aa0.58□□□□□ -2.32
RNU6-542P-201ENST00000516405 HDAC8Q9BY41 377 aa0.58□□□□□ -2.32
RNU6-542P-201ENST00000516405 GOPCQ9HD26 462 aa0.58□□□□□ -2.32
RNU6-542P-201ENST00000516405 DBR1Q9UK59 544 aaKnown RBP0.58□□□□□ -2.32
RNU6-542P-201ENST00000516405 PCDHA4Q9UN74 947 aa0.58□□□□□ -2.32
RNU6-542P-201ENST00000516405 BMP15O95972 392 aa0.57□□□□□ -2.32
RNU6-542P-201ENST00000516405 C1RP00736 705 aa0.57□□□□□ -2.32
RNU6-542P-201ENST00000516405 CCKARP32238 428 aa0.57□□□□□ -2.32
RNU6-542P-201ENST00000516405 IL13P35225 146 aa0.57□□□□□ -2.32
RNU6-542P-201ENST00000516405 KRT2P35908 639 aa0.57□□□□□ -2.32
RNU6-542P-201ENST00000516405 PCBP3P57721 371 aaKnown RBP0.57□□□□□ -2.32
RNU6-542P-201ENST00000516405 SF3B4Q15427 424 aaKnown RBP eCLIP0.57□□□□□ -2.32
RNU6-542P-201ENST00000516405 CLEC16AQ2KHT3 1053 aa0.57□□□□□ -2.32
RNU6-542P-201ENST00000516405 NBPF9Q3BBW0 867 aa0.57□□□□□ -2.32
RNU6-542P-201ENST00000516405 KLHL36Q8N4N3 616 aa0.57□□□□□ -2.32
RNU6-542P-201ENST00000516405 BEND2Q8NDZ0 799 aa0.57□□□□□ -2.32
RNU6-542P-201ENST00000516405 ELMO3Q96BJ8 720 aa0.57□□□□□ -2.32
RNU6-542P-201ENST00000516405 FAM89AQ96GI7 184 aa0.57□□□□□ -2.32
RNU6-542P-201ENST00000516405 ZNF48Q96MX3 618 aaPredicted RBP0.57□□□□□ -2.32
RNU6-542P-201ENST00000516405 MLST8Q9BVC4 326 aa0.57□□□□□ -2.32
RNU6-542P-201ENST00000516405 SPATA5L1Q9BVQ7 753 aa0.57□□□□□ -2.32
RNU6-542P-201ENST00000516405 KDM4CQ9H3R0 1056 aa0.57□□□□□ -2.32
RNU6-542P-201ENST00000516405 NRDE2Q9H7Z3 1164 aa0.57□□□□□ -2.32
RNU6-542P-201ENST00000516405 TMEM39AQ9NV64 488 aa0.57□□□□□ -2.32
RNU6-542P-201ENST00000516405 PARPBPQ9NWS1 579 aa0.57□□□□□ -2.32
RNU6-542P-201ENST00000516405 SLC30A1Q9Y6M5 507 aa0.57□□□□□ -2.32
RNU6-542P-201ENST00000516405 PRSS47A8MTI9 375 aa0.56□□□□□ -2.32
RNU6-542P-201ENST00000516405 H0Y858 1186 aa0.56□□□□□ -2.32
RNU6-542P-201ENST00000516405 CAPNS1P04632 268 aa0.56□□□□□ -2.32
RNU6-542P-201ENST00000516405 SYPP08247 313 aa0.56□□□□□ -2.32
RNU6-542P-201ENST00000516405 GLI4P10075 376 aa0.56□□□□□ -2.32
RNU6-542P-201ENST00000516405 NME2P22392 152 aa0.56□□□□□ -2.32
RNU6-542P-201ENST00000516405 ETF1P62495 437 aaKnown RBP0.56□□□□□ -2.32
RNU6-542P-201ENST00000516405 ADAM9Q13443 819 aa0.56□□□□□ -2.32
RNU6-542P-201ENST00000516405 HECTD2Q5U5R9 776 aa0.56□□□□□ -2.32
RNU6-542P-201ENST00000516405 RHOUQ7L0Q8 258 aa0.56□□□□□ -2.32
RNU6-542P-201ENST00000516405 MEPCEQ7L2J0 689 aaKnown RBP0.56□□□□□ -2.32
RNU6-542P-201ENST00000516405 ANKMY2Q8IV38 441 aa0.56□□□□□ -2.32
RNU6-542P-201ENST00000516405 SAMD14Q8IZD0 417 aaPredicted RBP0.56□□□□□ -2.32
RNU6-542P-201ENST00000516405 SH2D3CQ8N5H7 860 aa0.56□□□□□ -2.32
RNU6-542P-201ENST00000516405 ABTB2Q8N961 1025 aa0.56□□□□□ -2.32
RNU6-542P-201ENST00000516405 BOLLQ8N9W6 283 aaKnown RBP0.56□□□□□ -2.32
RNU6-542P-201ENST00000516405 SYTL5Q8TDW5 730 aaPredicted RBP0.56□□□□□ -2.32
RNU6-542P-201ENST00000516405 ZCCHC14Q8WYQ9 949 aaKnown RBP0.56□□□□□ -2.32
RNU6-542P-201ENST00000516405 PRIMPOLQ96LW4 560 aa0.56□□□□□ -2.32
RNU6-542P-201ENST00000516405 EHD4Q9H223 541 aa0.56□□□□□ -2.32
RNU6-542P-201ENST00000516405 L2HGDHQ9H9P8 463 aa0.56□□□□□ -2.32
RNU6-542P-201ENST00000516405 SLC24A3Q9HC58 644 aa0.56□□□□□ -2.32
RNU6-542P-201ENST00000516405 TLR9Q9NR96 1032 aa0.56□□□□□ -2.32
RNU6-542P-201ENST00000516405 AURKAIP1Q9NWT8 199 aaPredicted RBP0.56□□□□□ -2.32
RNU6-542P-201ENST00000516405 RBPJLQ9UBG7 517 aa0.56□□□□□ -2.32
RNU6-542P-201ENST00000516405 TJP2Q9UDY2 1190 aa0.56□□□□□ -2.32
RNU6-542P-201ENST00000516405 CORINQ9Y5Q5 1042 aa0.56□□□□□ -2.32
RNU6-542P-201ENST00000516405 SLC4A7Q9Y6M7 1214 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms