RNA–Protein interactions for RNA: ENST00000515835.2

PDE4D-225, Transcript of phosphodiesterase 4D, humanhuman

TSL 4 BASIC

Gene PDE4D, Length 590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-225ENST00000515835 FAM86C1Q9NVL1 165 aa8.85□□□□□ -0.99
PDE4D-225ENST00000515835 SETBP1Q9Y6X0 1596 aa8.85□□□□□ -0.99
PDE4D-225ENST00000515835 XIRP1Q702N8 1843 aaKnown RBP8.84□□□□□ -0.99
PDE4D-225ENST00000515835 RPGRIP1LQ68CZ1 1315 aa8.84□□□□□ -0.99
PDE4D-225ENST00000515835 CBFA2T2O43439 604 aa8.84□□□□□ -0.99
PDE4D-225ENST00000515835 PRAMEF1O95521 474 aa8.84□□□□□ -0.99
PDE4D-225ENST00000515835 CD247P20963 164 aa8.84□□□□□ -0.99
PDE4D-225ENST00000515835 FUT4P22083 530 aa8.84□□□□□ -0.99
PDE4D-225ENST00000515835 DCCP43146 1447 aa8.84□□□□□ -0.99
PDE4D-225ENST00000515835 RAB33AQ14088 237 aa8.84□□□□□ -0.99
PDE4D-225ENST00000515835 HEATR6Q6AI08 1181 aaKnown RBP8.84□□□□□ -0.99
PDE4D-225ENST00000515835 TP53INP2Q8IXH6 220 aa8.84□□□□□ -0.99
PDE4D-225ENST00000515835 FAM178BQ8IXR5 827 aa8.84□□□□□ -0.99
PDE4D-225ENST00000515835 DHX38Q92620 1227 aaKnown RBP8.84□□□□□ -0.99
PDE4D-225ENST00000515835 DRC1Q96MC2 740 aa8.84□□□□□ -0.99
PDE4D-225ENST00000515835 KLHL25Q9H0H3 589 aa8.84□□□□□ -0.99
PDE4D-225ENST00000515835 GFOD1Q9NXC2 390 aa8.84□□□□□ -0.99
PDE4D-225ENST00000515835 PPP1R1BQ9UD71 204 aaPredicted RBP8.84□□□□□ -0.99
PDE4D-225ENST00000515835 DUSP13Q9UII6 198 aa8.84□□□□□ -0.99
PDE4D-225ENST00000515835 ZNF451Q9Y4E5 1061 aa8.84□□□□□ -0.99
PDE4D-225ENST00000515835 CHD2O14647 1828 aaKnown RBP8.83□□□□□ -1
PDE4D-225ENST00000515835 A0A087WZG4 1122 aa8.83□□□□□ -1
PDE4D-225ENST00000515835 WASH4PA8MWX3 477 aa8.83□□□□□ -1
PDE4D-225ENST00000515835 ESR1P03372 595 aa8.83□□□□□ -1
PDE4D-225ENST00000515835 ITGA4P13612 1032 aa8.83□□□□□ -1
PDE4D-225ENST00000515835 ATF3P18847 181 aa8.83□□□□□ -1
PDE4D-225ENST00000515835 ZNF143P52747 638 aaPredicted RBP8.83□□□□□ -1
PDE4D-225ENST00000515835 GP2P55259 537 aaKnown RBP8.83□□□□□ -1
PDE4D-225ENST00000515835 ZP2Q05996 745 aa8.83□□□□□ -1
PDE4D-225ENST00000515835 C6orf15Q6UXA7 325 aaPredicted RBP8.83□□□□□ -1
PDE4D-225ENST00000515835 CREG2Q8IUH2 290 aa8.83□□□□□ -1
PDE4D-225ENST00000515835 GBP3Q9H0R5 595 aa8.83□□□□□ -1
PDE4D-225ENST00000515835 WHRNQ9P202 907 aa8.83□□□□□ -1
PDE4D-225ENST00000515835 FHOD1Q9Y613 1164 aa8.83□□□□□ -1
PDE4D-225ENST00000515835 SPHKAPQ2M3C7 1700 aa8.83□□□□□ -1
PDE4D-225ENST00000515835 PTPRUQ92729 1446 aa8.82□□□□□ -1
PDE4D-225ENST00000515835 ANKRD34BA5PLL1 514 aa8.82□□□□□ -1
PDE4D-225ENST00000515835 DDAH1O94760 285 aa8.82□□□□□ -1
PDE4D-225ENST00000515835 NAT2P11245 290 aa8.82□□□□□ -1
PDE4D-225ENST00000515835 NOL9Q5SY16 702 aaKnown RBP8.82□□□□□ -1
PDE4D-225ENST00000515835 SOGA3Q5TF21 947 aa8.82□□□□□ -1
PDE4D-225ENST00000515835 NBPF11Q86T75 865 aa8.82□□□□□ -1
PDE4D-225ENST00000515835 TCTN2Q96GX1 697 aa8.82□□□□□ -1
PDE4D-225ENST00000515835 TRIM55Q9BYV6 548 aa8.82□□□□□ -1
PDE4D-225ENST00000515835 CARS2Q9HA77 564 aaKnown RBP8.82□□□□□ -1
PDE4D-225ENST00000515835 JCADQ9P266 1359 aa8.82□□□□□ -1
PDE4D-225ENST00000515835 ROBO1Q9Y6N7 1651 aa8.81□□□□□ -1
PDE4D-225ENST00000515835 NEXMIFQ5QGS0 1516 aa8.81□□□□□ -1
PDE4D-225ENST00000515835 EPHX1P07099 455 aa8.81□□□□□ -1
PDE4D-225ENST00000515835 ZNF445P59923 1031 aa8.81□□□□□ -1
PDE4D-225ENST00000515835 DDR2Q16832 855 aa8.81□□□□□ -1
PDE4D-225ENST00000515835 SLC23A3Q6PIS1 610 aa8.81□□□□□ -1
PDE4D-225ENST00000515835 MICAL1Q8TDZ2 1067 aa8.81□□□□□ -1
PDE4D-225ENST00000515835 DSCC1Q9BVC3 393 aa8.81□□□□□ -1
PDE4D-225ENST00000515835 SUSD2Q9UGT4 822 aa8.81□□□□□ -1
PDE4D-225ENST00000515835 METP08581 1390 aa8.81□□□□□ -1
PDE4D-225ENST00000515835 PRAG1Q86YV5 1406 aa8.8□□□□□ -1
PDE4D-225ENST00000515835 PPM1BO75688 479 aa8.8□□□□□ -1
PDE4D-225ENST00000515835 GJB6O95452 261 aa8.8□□□□□ -1
PDE4D-225ENST00000515835 PLCL1Q15111 1095 aa8.8□□□□□ -1
PDE4D-225ENST00000515835 RNF111Q6ZNA4 994 aa8.8□□□□□ -1
PDE4D-225ENST00000515835 USHBP1Q8N6Y0 703 aa8.8□□□□□ -1
PDE4D-225ENST00000515835 CELF2-AS1Q8N7Q2 184 aa8.8□□□□□ -1
PDE4D-225ENST00000515835 PI4K2BQ8TCG2 481 aa8.8□□□□□ -1
PDE4D-225ENST00000515835 APBA2Q99767 749 aa8.8□□□□□ -1
PDE4D-225ENST00000515835 DIS3Q9Y2L1 958 aaKnown RBP8.8□□□□□ -1
PDE4D-225ENST00000515835 PCDHA11Q9Y5I1 949 aa8.8□□□□□ -1
PDE4D-225ENST00000515835 MYO5BQ9ULV0 1848 aa8.8□□□□□ -1
PDE4D-225ENST00000515835 CLTCL1P53675 1640 aa8.8□□□□□ -1
PDE4D-225ENST00000515835 NRXN3Q9Y4C0 1643 aa8.8□□□□□ -1
PDE4D-225ENST00000515835 SPATA31A6Q5VVP1 1343 aa8.8□□□□□ -1
PDE4D-225ENST00000515835 B2RBV5 119 aa8.79□□□□□ -1
PDE4D-225ENST00000515835 U2SURPO15042 1029 aaKnown RBP8.79□□□□□ -1
PDE4D-225ENST00000515835 GSNP06396 782 aa8.79□□□□□ -1
PDE4D-225ENST00000515835 PCBP3P57721 371 aaKnown RBP8.79□□□□□ -1
PDE4D-225ENST00000515835 EGR3Q06889 387 aa8.79□□□□□ -1
PDE4D-225ENST00000515835 LINC00116Q8NCU8 138 aa8.79□□□□□ -1
PDE4D-225ENST00000515835 UBXN4Q92575 508 aa8.79□□□□□ -1
PDE4D-225ENST00000515835 RGS17Q9UGC6 210 aaPredicted RBP8.79□□□□□ -1
PDE4D-225ENST00000515835 SF3B6Q9Y3B4 125 aaKnown RBP8.79□□□□□ -1
PDE4D-225ENST00000515835 XRN1Q8IZH2 1706 aaKnown RBP8.78□□□□□ -1
PDE4D-225ENST00000515835 BMP8BP34820 402 aa8.78□□□□□ -1
PDE4D-225ENST00000515835 CTSKP43235 329 aa8.78□□□□□ -1
PDE4D-225ENST00000515835 BRINP3Q76B58 766 aa8.78□□□□□ -1
PDE4D-225ENST00000515835 ADAT2Q7Z6V5 191 aaKnown RBP8.78□□□□□ -1
PDE4D-225ENST00000515835 ABI1Q8IZP0 508 aa8.78□□□□□ -1
PDE4D-225ENST00000515835 FIBCD1Q8N539 461 aa8.78□□□□□ -1
PDE4D-225ENST00000515835 BRF1Q92994 677 aa8.78□□□□□ -1
PDE4D-225ENST00000515835 RCC1LQ96I51 464 aaKnown RBP8.78□□□□□ -1
PDE4D-225ENST00000515835 FGD4Q96M96 766 aa8.78□□□□□ -1
PDE4D-225ENST00000515835 MPHOSPH9Q99550 1183 aa8.78□□□□□ -1
PDE4D-225ENST00000515835 ST7Q9NRC1 585 aa8.78□□□□□ -1
PDE4D-225ENST00000515835 SIRPGQ9P1W8 387 aa8.78□□□□□ -1
PDE4D-225ENST00000515835 MINPP1Q9UNW1 487 aa8.78□□□□□ -1
PDE4D-225ENST00000515835 OAS3Q9Y6K5 1087 aaKnown RBP8.78□□□□□ -1
PDE4D-225ENST00000515835 AHDC1Q5TGY3 1603 aaPredicted RBP8.78□□□□□ -1
PDE4D-225ENST00000515835 PTCH1Q13635 1447 aa8.78□□□□□ -1
PDE4D-225ENST00000515835 ADGRL3Q9HAR2 1447 aa8.78□□□□□ -1
PDE4D-225ENST00000515835 SSU72P8A0A1W2PR75 194 aa8.77□□□□□ -1.01
PDE4D-225ENST00000515835 MEIS1O00470 390 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms