RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 CCDC144BQ3MJ40 725 aa22.48■■□□□ 1.19
LMNA-225ENST00000515824 BLOC1S2Q6QNY1 142 aa22.48■■□□□ 1.19
LMNA-225ENST00000515824 RNF180Q86T96 592 aa22.48■■□□□ 1.19
LMNA-225ENST00000515824 FANCBQ8NB91 859 aa22.48■■□□□ 1.19
LMNA-225ENST00000515824 TBC1D5Q92609 795 aa22.48■■□□□ 1.19
LMNA-225ENST00000515824 SPZ1Q9BXG8 430 aa22.48■■□□□ 1.19
LMNA-225ENST00000515824 USP26Q9BXU7 913 aa22.48■■□□□ 1.19
LMNA-225ENST00000515824 SENP6Q9GZR1 1112 aaPredicted RBP22.48■■□□□ 1.19
LMNA-225ENST00000515824 KATNBL1Q9H079 304 aa22.48■■□□□ 1.19
LMNA-225ENST00000515824 NR2E3Q9Y5X4 410 aa22.48■■□□□ 1.19
LMNA-225ENST00000515824 EVI5O60447 810 aa22.47■■□□□ 1.19
LMNA-225ENST00000515824 DUSP11O75319 330 aaKnown RBP22.47■■□□□ 1.19
LMNA-225ENST00000515824 LRRC41Q15345 812 aa22.47■■□□□ 1.19
LMNA-225ENST00000515824 MORC4Q8TE76 937 aa22.47■■□□□ 1.19
LMNA-225ENST00000515824 RRP36Q96EU6 259 aaKnown RBP22.47■■□□□ 1.19
LMNA-225ENST00000515824 PPP1R11O60927 126 aaPredicted RBP22.46■■□□□ 1.19
LMNA-225ENST00000515824 EEPD1Q7L9B9 569 aa22.46■■□□□ 1.19
LMNA-225ENST00000515824 MICU3Q86XE3 530 aa22.46■■□□□ 1.19
LMNA-225ENST00000515824 SYTL5Q8TDW5 730 aaPredicted RBP22.46■■□□□ 1.19
LMNA-225ENST00000515824 SPC25Q9HBM1 224 aa22.46■■□□□ 1.19
LMNA-225ENST00000515824 VTA1Q9NP79 307 aa22.46■■□□□ 1.19
LMNA-225ENST00000515824 MAP3K20Q9NYL2 800 aaKnown RBP22.46■■□□□ 1.19
LMNA-225ENST00000515824 EIF5BO60841 1220 aaKnown RBP22.45■■□□□ 1.18
LMNA-225ENST00000515824 PGK1P00558 417 aa22.45■■□□□ 1.18
LMNA-225ENST00000515824 CFBP00751 764 aa22.45■■□□□ 1.18
LMNA-225ENST00000515824 TNFAIP2Q03169 654 aa22.45■■□□□ 1.18
LMNA-225ENST00000515824 APOA5Q6Q788 366 aa22.45■■□□□ 1.18
LMNA-225ENST00000515824 RAB11FIP4Q86YS3 637 aa22.45■■□□□ 1.18
LMNA-225ENST00000515824 SRBD1Q8N5C6 995 aaKnown RBP22.45■■□□□ 1.18
LMNA-225ENST00000515824 SAMD3Q8N6K7 520 aa22.45■■□□□ 1.18
LMNA-225ENST00000515824 PIBF1Q8WXW3 757 aa22.45■■□□□ 1.18
LMNA-225ENST00000515824 SEC63Q9UGP8 760 aaKnown RBP22.45■■□□□ 1.18
LMNA-225ENST00000515824 DDX49Q9Y6V7 483 aaKnown RBP22.45■■□□□ 1.18
LMNA-225ENST00000515824 ZBTB43O43298 467 aa22.44■■□□□ 1.18
LMNA-225ENST00000515824 PLEKHA8P1O95397 391 aa22.44■■□□□ 1.18
LMNA-225ENST00000515824 PDE4DQ08499 809 aa22.44■■□□□ 1.18
LMNA-225ENST00000515824 Q6ZUG5 572 aa22.44■■□□□ 1.18
LMNA-225ENST00000515824 NOL8Q76FK4 1167 aaKnown RBP22.44■■□□□ 1.18
LMNA-225ENST00000515824 NSUN6Q8TEA1 469 aaKnown RBP22.44■■□□□ 1.18
LMNA-225ENST00000515824 LENG1Q96BZ8 264 aaPredicted RBP22.44■■□□□ 1.18
LMNA-225ENST00000515824 RBM28Q9NW13 759 aaKnown RBP22.44■■□□□ 1.18
LMNA-225ENST00000515824 BRPF3Q9ULD4 1205 aa22.44■■□□□ 1.18
LMNA-225ENST00000515824 KLF18A0A0U1RQI7 1052 aa22.43■■□□□ 1.18
LMNA-225ENST00000515824 CPA1P15085 419 aa22.43■■□□□ 1.18
LMNA-225ENST00000515824 CASTP20810 708 aaKnown RBP22.43■■□□□ 1.18
LMNA-225ENST00000515824 RPS6KB1P23443 525 aa22.43■■□□□ 1.18
LMNA-225ENST00000515824 ADCYAP1R1P41586 468 aa22.43■■□□□ 1.18
LMNA-225ENST00000515824 IQSEC1Q6DN90 963 aa22.43■■□□□ 1.18
LMNA-225ENST00000515824 TAPT1Q6NXT6 567 aa22.43■■□□□ 1.18
LMNA-225ENST00000515824 FBXO16Q8IX29 292 aaPredicted RBP22.43■■□□□ 1.18
LMNA-225ENST00000515824 CMTR1Q8N1G2 835 aaKnown RBP22.43■■□□□ 1.18
LMNA-225ENST00000515824 TAAR1Q96RJ0 339 aa22.43■■□□□ 1.18
LMNA-225ENST00000515824 RMDN3Q96TC7 470 aa22.43■■□□□ 1.18
LMNA-225ENST00000515824 SYNRGQ9UMZ2 1314 aa22.42■■□□□ 1.18
LMNA-225ENST00000515824 ADAMTS4O75173 837 aa22.42■■□□□ 1.18
LMNA-225ENST00000515824 EDNRBP24530 442 aa22.42■■□□□ 1.18
LMNA-225ENST00000515824 HSD17B4P51659 736 aa22.42■■□□□ 1.18
LMNA-225ENST00000515824 RCAN1P53805 252 aa22.42■■□□□ 1.18
LMNA-225ENST00000515824 GHRHRQ02643 423 aa22.42■■□□□ 1.18
LMNA-225ENST00000515824 RTN1Q16799 776 aa22.42■■□□□ 1.18
LMNA-225ENST00000515824 TMTC3Q6ZXV5 915 aa22.42■■□□□ 1.18
LMNA-225ENST00000515824 CCDC82Q8N4S0 544 aa22.42■■□□□ 1.18
LMNA-225ENST00000515824 IWS1Q96ST2 819 aa22.42■■□□□ 1.18
LMNA-225ENST00000515824 TSEN34Q9BSV6 310 aaKnown RBP22.42■■□□□ 1.18
LMNA-225ENST00000515824 PDGFCQ9NRA1 345 aa22.42■■□□□ 1.18
LMNA-225ENST00000515824 COL20A1Q9P218 1284 aa22.42■■□□□ 1.18
LMNA-225ENST00000515824 NAP1L2Q9ULW6 460 aaPredicted RBP22.42■■□□□ 1.18
LMNA-225ENST00000515824 BAZ2BQ9UIF8 2168 aaKnown RBP22.42■■□□□ 1.18
LMNA-225ENST00000515824 FRMPD3Q5JV73 1810 aa22.41■■□□□ 1.18
LMNA-225ENST00000515824 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.41■■□□□ 1.18
LMNA-225ENST00000515824 GCOM1H8Y6P7 765 aaPredicted RBP22.41■■□□□ 1.18
LMNA-225ENST00000515824 OPLAHO14841 1288 aa22.41■■□□□ 1.18
LMNA-225ENST00000515824 ADCY6O43306 1168 aa22.41■■□□□ 1.18
LMNA-225ENST00000515824 POLR2MP0CAP2 368 aa22.41■■□□□ 1.18
LMNA-225ENST00000515824 GJA9P57773 515 aa22.41■■□□□ 1.18
LMNA-225ENST00000515824 PPP2R5BQ15173 497 aa22.41■■□□□ 1.18
LMNA-225ENST00000515824 ARHGEF16Q5VV41 709 aa22.41■■□□□ 1.18
LMNA-225ENST00000515824 FBXL16Q8N461 479 aa22.41■■□□□ 1.18
LMNA-225ENST00000515824 KLHDC9Q8NEP7 349 aa22.41■■□□□ 1.18
LMNA-225ENST00000515824 MCM3APO60318 1980 aa22.41■■□□□ 1.18
LMNA-225ENST00000515824 MYH6P13533 1939 aa22.41■■□□□ 1.18
LMNA-225ENST00000515824 GOLGA8AA7E2F4 631 aa22.4■■□□□ 1.18
LMNA-225ENST00000515824 GOLGA8BA8MQT2 603 aa22.4■■□□□ 1.18
LMNA-225ENST00000515824 H0YGN5 161 aa22.4■■□□□ 1.18
LMNA-225ENST00000515824 C6orf222P0C671 652 aaPredicted RBP22.4■■□□□ 1.18
LMNA-225ENST00000515824 ATN1P54259 1190 aaPredicted RBP22.4■■□□□ 1.18
LMNA-225ENST00000515824 RUFY3Q7L099 469 aa22.4■■□□□ 1.18
LMNA-225ENST00000515824 PCSK9Q8NBP7 692 aaKnown RBP22.4■■□□□ 1.18
LMNA-225ENST00000515824 BRF1Q92994 677 aa22.4■■□□□ 1.18
LMNA-225ENST00000515824 FERMT2Q96AC1 680 aa22.4■■□□□ 1.18
LMNA-225ENST00000515824 ZSWIM6Q9HCJ5 1215 aa22.4■■□□□ 1.18
LMNA-225ENST00000515824 PHF24Q9UPV7 400 aa22.4■■□□□ 1.18
LMNA-225ENST00000515824 GNEQ9Y223 722 aaKnown RBP22.4■■□□□ 1.18
LMNA-225ENST00000515824 CYP46A1Q9Y6A2 500 aa22.4■■□□□ 1.18
LMNA-225ENST00000515824 SMPD1P17405 629 aa22.39■■□□□ 1.17
LMNA-225ENST00000515824 APOBRQ0VD83 1088 aa22.39■■□□□ 1.17
LMNA-225ENST00000515824 STXBP2Q15833 593 aa22.39■■□□□ 1.17
LMNA-225ENST00000515824 LRRC26Q2I0M4 334 aa22.39■■□□□ 1.17
LMNA-225ENST00000515824 GNASQ5JWF2 1037 aa22.39■■□□□ 1.17
LMNA-225ENST00000515824 WDR11Q9BZH6 1224 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms