RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-224	ENST00000515711	MOXD1	Q6UVY6	613 aa		13.54	□□□□□ -0.24
LMNA-224	ENST00000515711	SPICE1	Q8N0Z3	855 aa		13.54	□□□□□ -0.24
LMNA-224	ENST00000515711	BPIFA3	Q9BQP9	254 aa		13.54	□□□□□ -0.24
LMNA-224	ENST00000515711	WDR18	Q9BV38	432 aa		13.54	□□□□□ -0.24
LMNA-224	ENST00000515711	RAB34	Q9BZG1	259 aa		13.54	□□□□□ -0.24
LMNA-224	ENST00000515711	PICK1	Q9NRD5	415 aa		13.54	□□□□□ -0.24
LMNA-224	ENST00000515711	ASTN2	O75129	1339 aa	Predicted RBP	13.54	□□□□□ -0.24
LMNA-224	ENST00000515711	ABCB11	O95342	1321 aa		13.54	□□□□□ -0.24
LMNA-224	ENST00000515711	PTPRF	P10586	1907 aa		13.54	□□□□□ -0.24
LMNA-224	ENST00000515711	PIK3CD	O00329	1044 aa		13.53	□□□□□ -0.24
LMNA-224	ENST00000515711	ACTN4	O43707	911 aa	Known RBP	13.53	□□□□□ -0.24
LMNA-224	ENST00000515711	FDX1	P10109	184 aa		13.53	□□□□□ -0.24
LMNA-224	ENST00000515711	EPS15	P42566	896 aa		13.53	□□□□□ -0.24
LMNA-224	ENST00000515711	NLRP12	P59046	1061 aa		13.53	□□□□□ -0.24
LMNA-224	ENST00000515711	POSTN	Q15063	836 aa		13.53	□□□□□ -0.24
LMNA-224	ENST00000515711	TMEM266	Q2M3C6	531 aa		13.53	□□□□□ -0.24
LMNA-224	ENST00000515711	LONRF3	Q496Y0	759 aa		13.53	□□□□□ -0.24
LMNA-224	ENST00000515711	SPECC1	Q5M775	1068 aa		13.53	□□□□□ -0.24
LMNA-224	ENST00000515711	NOL9	Q5SY16	702 aa	Known RBP	13.53	□□□□□ -0.24
LMNA-224	ENST00000515711	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.53	□□□□□ -0.24
LMNA-224	ENST00000515711	TRIML1	Q8N9V2	468 aa		13.53	□□□□□ -0.24
LMNA-224	ENST00000515711	IQUB	Q8NA54	791 aa		13.53	□□□□□ -0.24
LMNA-224	ENST00000515711	CCSER1	Q9C0I3	900 aa		13.53	□□□□□ -0.24
LMNA-224	ENST00000515711	DNAJC25	Q9H1X3	360 aa		13.53	□□□□□ -0.24
LMNA-224	ENST00000515711	EHMT1	Q9H9B1	1298 aa		13.53	□□□□□ -0.24
LMNA-224	ENST00000515711	MAGEF1	Q9HAY2	307 aa		13.53	□□□□□ -0.24
LMNA-224	ENST00000515711	TMEM260	Q9NX78	707 aa		13.53	□□□□□ -0.24
LMNA-224	ENST00000515711	SSC5D	A1L4H1	1573 aa		13.53	□□□□□ -0.24
LMNA-224	ENST00000515711	LOC285556	D6RIA3	1793 aa		13.53	□□□□□ -0.24
LMNA-224	ENST00000515711	TRAF5	O00463	557 aa		13.52	□□□□□ -0.25
LMNA-224	ENST00000515711	SMC2	O95347	1197 aa		13.52	□□□□□ -0.25
LMNA-224	ENST00000515711	SLFN14	P0C7P3	912 aa		13.52	□□□□□ -0.25
LMNA-224	ENST00000515711	MAP2K2	P36507	400 aa		13.52	□□□□□ -0.25
LMNA-224	ENST00000515711	USP11	P51784	963 aa		13.52	□□□□□ -0.25
LMNA-224	ENST00000515711	CALCRL	Q16602	461 aa		13.52	□□□□□ -0.25
LMNA-224	ENST00000515711	UBE2S	Q16763	222 aa		13.52	□□□□□ -0.25
LMNA-224	ENST00000515711	CST9	Q5W186	159 aa		13.52	□□□□□ -0.25
LMNA-224	ENST00000515711	DHX58	Q96C10	678 aa		13.52	□□□□□ -0.25
LMNA-224	ENST00000515711	DCPS	Q96C86	337 aa	Known RBP	13.52	□□□□□ -0.25
LMNA-224	ENST00000515711	PDLIM2	Q96JY6	352 aa		13.52	□□□□□ -0.25
LMNA-224	ENST00000515711	WRNIP1	Q96S55	665 aa		13.52	□□□□□ -0.25
LMNA-224	ENST00000515711	ANO3	Q9BYT9	981 aa		13.52	□□□□□ -0.25
LMNA-224	ENST00000515711	CUEDC2	Q9H467	287 aa		13.52	□□□□□ -0.25
LMNA-224	ENST00000515711	CBX8	Q9HC52	389 aa		13.52	□□□□□ -0.25
LMNA-224	ENST00000515711	CCDC39	Q9UFE4	941 aa		13.52	□□□□□ -0.25
LMNA-224	ENST00000515711	SERTAD1	Q9UHV2	236 aa		13.52	□□□□□ -0.25
LMNA-224	ENST00000515711	DACH1	Q9UI36	760 aa		13.52	□□□□□ -0.25
LMNA-224	ENST00000515711	MRPL11	Q9Y3B7	192 aa	Known RBP	13.52	□□□□□ -0.25
LMNA-224	ENST00000515711	COL11A1	P12107	1806 aa	Predicted RBP	13.51	□□□□□ -0.25
LMNA-224	ENST00000515711	SPDYE3	A6NKU9	549 aa		13.51	□□□□□ -0.25
LMNA-224	ENST00000515711	C19orf81	C9J6K1	198 aa		13.51	□□□□□ -0.25
LMNA-224	ENST00000515711	GOLGA6L19	H0YKK7	550 aa		13.51	□□□□□ -0.25
LMNA-224	ENST00000515711	SLC26A4	O43511	780 aa		13.51	□□□□□ -0.25
LMNA-224	ENST00000515711	CA12	O43570	354 aa		13.51	□□□□□ -0.25
LMNA-224	ENST00000515711	FXR2	P51116	673 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
LMNA-224	ENST00000515711	TPM4	P67936	248 aa		13.51	□□□□□ -0.25
LMNA-224	ENST00000515711	ZYX	Q15942	572 aa	Known RBP	13.51	□□□□□ -0.25
LMNA-224	ENST00000515711	USH1G	Q495M9	461 aa		13.51	□□□□□ -0.25
LMNA-224	ENST00000515711	HABP4	Q5JVS0	413 aa	Known RBP	13.51	□□□□□ -0.25
LMNA-224	ENST00000515711	KIAA1755	Q5JYT7	1200 aa		13.51	□□□□□ -0.25
LMNA-224	ENST00000515711	NT5DC1	Q5TFE4	455 aa		13.51	□□□□□ -0.25
LMNA-224	ENST00000515711	PNMA8A	Q86V59	439 aa	Predicted RBP	13.51	□□□□□ -0.25
LMNA-224	ENST00000515711	SULF1	Q8IWU6	871 aa		13.51	□□□□□ -0.25
LMNA-224	ENST00000515711	SAMD3	Q8N6K7	520 aa		13.51	□□□□□ -0.25
LMNA-224	ENST00000515711	PRPF38A	Q8NAV1	312 aa	Known RBP	13.51	□□□□□ -0.25
LMNA-224	ENST00000515711	SMARCE1	Q969G3	411 aa		13.51	□□□□□ -0.25
LMNA-224	ENST00000515711	KIFC2	Q96AC6	838 aa		13.51	□□□□□ -0.25
LMNA-224	ENST00000515711	TRIM44	Q96DX7	344 aa	Predicted RBP	13.51	□□□□□ -0.25
LMNA-224	ENST00000515711	EPSTI1	Q96J88	318 aa		13.51	□□□□□ -0.25
LMNA-224	ENST00000515711	C12orf42	Q96LP6	360 aa		13.51	□□□□□ -0.25
LMNA-224	ENST00000515711	SLF1	Q9BQI6	1058 aa		13.51	□□□□□ -0.25
LMNA-224	ENST00000515711	TMEM60	Q9H2L4	133 aa		13.51	□□□□□ -0.25
LMNA-224	ENST00000515711	TLL2	Q9Y6L7	1015 aa		13.51	□□□□□ -0.25
LMNA-224	ENST00000515711	BECN2	A8MW95	431 aa		13.5	□□□□□ -0.25
LMNA-224	ENST00000515711	MEIS2	O14770	477 aa		13.5	□□□□□ -0.25
LMNA-224	ENST00000515711	MYL1	P05976	194 aa		13.5	□□□□□ -0.25
LMNA-224	ENST00000515711	INPP5B	P32019	993 aa		13.5	□□□□□ -0.25
LMNA-224	ENST00000515711	STAT6	P42226	847 aa		13.5	□□□□□ -0.25
LMNA-224	ENST00000515711	HIRA	P54198	1017 aa	Predicted RBP	13.5	□□□□□ -0.25
LMNA-224	ENST00000515711	MDM2	Q00987	491 aa	Predicted RBP	13.5	□□□□□ -0.25
LMNA-224	ENST00000515711	SEMA3F	Q13275	785 aa		13.5	□□□□□ -0.25
LMNA-224	ENST00000515711	PNOC	Q13519	176 aa		13.5	□□□□□ -0.25
LMNA-224	ENST00000515711	IL17A	Q16552	155 aa		13.5	□□□□□ -0.25
LMNA-224	ENST00000515711	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.5	□□□□□ -0.25
LMNA-224	ENST00000515711	USP50	Q70EL3	339 aa	Predicted RBP	13.5	□□□□□ -0.25
LMNA-224	ENST00000515711	PDILT	Q8N807	584 aa		13.5	□□□□□ -0.25
LMNA-224	ENST00000515711	ZNF280C	Q8ND82	737 aa		13.5	□□□□□ -0.25
LMNA-224	ENST00000515711	ZC3H15	Q8WU90	426 aa	Known RBP	13.5	□□□□□ -0.25
LMNA-224	ENST00000515711	MTMR9	Q96QG7	549 aa		13.5	□□□□□ -0.25
LMNA-224	ENST00000515711	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.5	□□□□□ -0.25
LMNA-224	ENST00000515711	DISC1	Q9NRI5	854 aa		13.5	□□□□□ -0.25
LMNA-224	ENST00000515711	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.5	□□□□□ -0.25
LMNA-224	ENST00000515711	DDX25	Q9UHL0	483 aa	Known RBP	13.5	□□□□□ -0.25
LMNA-224	ENST00000515711	SCAF8	Q9UPN6	1271 aa	Known RBP	13.5	□□□□□ -0.25
LMNA-224	ENST00000515711	RABGAP1	Q9Y3P9	1069 aa		13.5	□□□□□ -0.25
LMNA-224	ENST00000515711	RLF	Q13129	1914 aa		13.5	□□□□□ -0.25
LMNA-224	ENST00000515711	LOXHD1	Q8IVV2	1947 aa		13.5	□□□□□ -0.25
LMNA-224	ENST00000515711	CYP3A7-CYP3A51P	A0A087WV96	503 aa		13.49	□□□□□ -0.25
LMNA-224	ENST00000515711	SMTNL1	A8MU46	457 aa		13.49	□□□□□ -0.25
LMNA-224	ENST00000515711	ICAM1	P05362	532 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms