RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 PDIA3P30101 505 aaKnown RBP30■■■□□ 2.39
DDR1-279ENST00000515529 CDC27P30260 824 aa30■■■□□ 2.39
DDR1-279ENST00000515529 EVCP57679 992 aa30■■■□□ 2.39
DDR1-279ENST00000515529 PRAMEF19Q5SWL8 479 aa30■■■□□ 2.39
DDR1-279ENST00000515529 FGD4Q96M96 766 aa30■■■□□ 2.39
DDR1-279ENST00000515529 KIAA0100Q14667 2235 aaKnown RBP30■■■□□ 2.39
DDR1-279ENST00000515529 CNTNAP5Q8WYK1 1306 aa29.99■■■□□ 2.39
DDR1-279ENST00000515529 B4DLN1 442 aa29.99■■■□□ 2.39
DDR1-279ENST00000515529 CAPN2P17655 700 aa29.99■■■□□ 2.39
DDR1-279ENST00000515529 ADD1P35611 737 aaKnown RBP29.99■■■□□ 2.39
DDR1-279ENST00000515529 MRPL12P52815 198 aaKnown RBP29.99■■■□□ 2.39
DDR1-279ENST00000515529 TRPV1Q8NER1 839 aa29.99■■■□□ 2.39
DDR1-279ENST00000515529 ZNF274Q96GC6 653 aaPredicted RBP29.99■■■□□ 2.39
DDR1-279ENST00000515529 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.99■■■□□ 2.39
DDR1-279ENST00000515529 ZHX1Q9UKY1 873 aaPredicted RBP29.99■■■□□ 2.39
DDR1-279ENST00000515529 NID2Q14112 1375 aa29.99■■■□□ 2.39
DDR1-279ENST00000515529 RBBP6Q7Z6E9 1792 aaKnown RBP29.98■■■□□ 2.39
DDR1-279ENST00000515529 hCG_1642624A0A1W2PR95 340 aa29.98■■■□□ 2.39
DDR1-279ENST00000515529 NEK4P51957 841 aa29.98■■■□□ 2.39
DDR1-279ENST00000515529 SAMD3Q8N6K7 520 aa29.98■■■□□ 2.39
DDR1-279ENST00000515529 PURBQ96QR8 312 aaKnown RBP29.98■■■□□ 2.39
DDR1-279ENST00000515529 LARP6Q9BRS8 491 aaKnown RBP29.98■■■□□ 2.39
DDR1-279ENST00000515529 ALDH8A1Q9H2A2 487 aaPredicted RBP29.98■■■□□ 2.39
DDR1-279ENST00000515529 FAM217BQ9NTX9 383 aaPredicted RBP29.98■■■□□ 2.39
DDR1-279ENST00000515529 CENPFP49454 3210 aa29.98■■■□□ 2.39
DDR1-279ENST00000515529 SEPT4O43236 478 aa29.97■■■□□ 2.39
DDR1-279ENST00000515529 ALDH5A1P51649 535 aaPredicted RBP29.97■■■□□ 2.39
DDR1-279ENST00000515529 CCT2P78371 535 aaKnown RBP29.97■■■□□ 2.39
DDR1-279ENST00000515529 AKAP17AQ02040 695 aaKnown RBP29.97■■■□□ 2.39
DDR1-279ENST00000515529 HEATR3Q7Z4Q2 680 aa29.97■■■□□ 2.39
DDR1-279ENST00000515529 DNERQ8NFT8 737 aa29.97■■■□□ 2.39
DDR1-279ENST00000515529 TBC1D5Q92609 795 aa29.97■■■□□ 2.39
DDR1-279ENST00000515529 ABHD16BQ9H3Z7 469 aa29.97■■■□□ 2.39
DDR1-279ENST00000515529 MAP3K20Q9NYL2 800 aaKnown RBP29.97■■■□□ 2.39
DDR1-279ENST00000515529 DDX20Q9UHI6 824 aaKnown RBP29.97■■■□□ 2.39
DDR1-279ENST00000515529 V9GY48 417 aaPredicted RBP29.97■■■□□ 2.39
DDR1-279ENST00000515529 LOC102724159A0A0B4J2E5 919 aa29.96■■■□□ 2.39
DDR1-279ENST00000515529 GCOM1H8Y6P7 765 aaPredicted RBP29.96■■■□□ 2.39
DDR1-279ENST00000515529 CPLX1O14810 134 aa29.96■■■□□ 2.39
DDR1-279ENST00000515529 SNAI1O95863 264 aaPredicted RBP29.96■■■□□ 2.39
DDR1-279ENST00000515529 POLR2MP0CAP2 368 aa29.96■■■□□ 2.39
DDR1-279ENST00000515529 PWP2Q15269 919 aaKnown RBP29.96■■■□□ 2.39
DDR1-279ENST00000515529 SYTL5Q8TDW5 730 aaPredicted RBP29.96■■■□□ 2.39
DDR1-279ENST00000515529 AK2P54819 239 aa29.95■■■□□ 2.39
DDR1-279ENST00000515529 STK3Q13188 491 aa29.95■■■□□ 2.39
DDR1-279ENST00000515529 ACVR2BQ13705 512 aa29.95■■■□□ 2.39
DDR1-279ENST00000515529 CPLX2Q6PUV4 134 aaKnown RBP29.95■■■□□ 2.39
DDR1-279ENST00000515529 CUL5Q93034 780 aa29.95■■■□□ 2.39
DDR1-279ENST00000515529 RBM27Q9P2N5 1060 aaKnown RBP29.95■■■□□ 2.39
DDR1-279ENST00000515529 HSD17B4P51659 736 aa29.94■■■□□ 2.38
DDR1-279ENST00000515529 PDE4DQ08499 809 aa29.94■■■□□ 2.38
DDR1-279ENST00000515529 FUT2Q10981 343 aa29.94■■■□□ 2.38
DDR1-279ENST00000515529 NSUN6Q8TEA1 469 aaKnown RBP29.94■■■□□ 2.38
DDR1-279ENST00000515529 NCOA5Q9HCD5 579 aaKnown RBP29.94■■■□□ 2.38
DDR1-279ENST00000515529 OPLAHO14841 1288 aa29.93■■■□□ 2.38
DDR1-279ENST00000515529 ZNF865P0CJ78 1059 aaPredicted RBP29.93■■■□□ 2.38
DDR1-279ENST00000515529 AKR1A1P14550 325 aa29.93■■■□□ 2.38
DDR1-279ENST00000515529 ARHGEF16Q5VV41 709 aa29.93■■■□□ 2.38
DDR1-279ENST00000515529 NOL8Q76FK4 1167 aaKnown RBP29.93■■■□□ 2.38
DDR1-279ENST00000515529 SHISA4Q96DD7 197 aa29.93■■■□□ 2.38
DDR1-279ENST00000515529 RMDN3Q96TC7 470 aa29.93■■■□□ 2.38
DDR1-279ENST00000515529 CRISPLD2Q9H0B8 497 aa29.93■■■□□ 2.38
DDR1-279ENST00000515529 SLKQ9H2G2 1235 aaPredicted RBP29.93■■■□□ 2.38
DDR1-279ENST00000515529 FAM184BQ9ULE4 1060 aa29.93■■■□□ 2.38
DDR1-279ENST00000515529 ASTN1O14525 1302 aa29.93■■■□□ 2.38
DDR1-279ENST00000515529 hCG_1984214I3L0E3 225 aa29.92■■■□□ 2.38
DDR1-279ENST00000515529 HOXA13P31271 388 aaPredicted RBP29.92■■■□□ 2.38
DDR1-279ENST00000515529 RBM25P49756 843 aaKnown RBP29.92■■■□□ 2.38
DDR1-279ENST00000515529 ZNF713Q8N859 430 aaPredicted RBP29.92■■■□□ 2.38
DDR1-279ENST00000515529 GPKOWQ92917 476 aaPredicted RBP eCLIP29.92■■■□□ 2.38
DDR1-279ENST00000515529 TAAR1Q96RJ0 339 aa29.92■■■□□ 2.38
DDR1-279ENST00000515529 RARBP10826 455 aa29.91■■■□□ 2.38
DDR1-279ENST00000515529 NAPAP54920 295 aa29.91■■■□□ 2.38
DDR1-279ENST00000515529 GHRHRQ02643 423 aa29.91■■■□□ 2.38
DDR1-279ENST00000515529 LHX8Q68G74 356 aa29.91■■■□□ 2.38
DDR1-279ENST00000515529 TRIM22Q8IYM9 498 aa29.91■■■□□ 2.38
DDR1-279ENST00000515529 SMARCC2Q8TAQ2 1214 aa29.91■■■□□ 2.38
DDR1-279ENST00000515529 VTA1Q9NP79 307 aa29.91■■■□□ 2.38
DDR1-279ENST00000515529 OGDHLQ9ULD0 1010 aa29.91■■■□□ 2.38
DDR1-279ENST00000515529 IFNAR1P17181 557 aa29.9■■■□□ 2.38
DDR1-279ENST00000515529 RGS19P49795 217 aa29.9■■■□□ 2.38
DDR1-279ENST00000515529 ANO1Q5XXA6 986 aa29.9■■■□□ 2.38
DDR1-279ENST00000515529 WWC2Q6AWC2 1192 aa29.9■■■□□ 2.38
DDR1-279ENST00000515529 EEPD1Q7L9B9 569 aa29.9■■■□□ 2.38
DDR1-279ENST00000515529 FCHSD1Q86WN1 690 aa29.9■■■□□ 2.38
DDR1-279ENST00000515529 MORC4Q8TE76 937 aa29.9■■■□□ 2.38
DDR1-279ENST00000515529 PHKBQ93100 1093 aa29.9■■■□□ 2.38
DDR1-279ENST00000515529 SLC26A6Q9BXS9 759 aa29.9■■■□□ 2.38
DDR1-279ENST00000515529 PSTPIP2Q9H939 334 aa29.9■■■□□ 2.38
DDR1-279ENST00000515529 COL20A1Q9P218 1284 aa29.9■■■□□ 2.38
DDR1-279ENST00000515529 TPCN1Q9ULQ1 816 aa29.9■■■□□ 2.38
DDR1-279ENST00000515529 LCTP09848 1927 aa29.89■■■□□ 2.38
DDR1-279ENST00000515529 PRPF3O43395 683 aaKnown RBP29.89■■■□□ 2.38
DDR1-279ENST00000515529 FARP2O94887 1054 aaPredicted RBP29.89■■■□□ 2.38
DDR1-279ENST00000515529 PPP1R18Q6NYC8 613 aa29.89■■■□□ 2.38
DDR1-279ENST00000515529 FBXO16Q8IX29 292 aaPredicted RBP29.89■■■□□ 2.38
DDR1-279ENST00000515529 ANKLE1Q8NAG6 615 aa29.89■■■□□ 2.38
DDR1-279ENST00000515529 IWS1Q96ST2 819 aa29.89■■■□□ 2.38
DDR1-279ENST00000515529 RNF26Q9BY78 433 aaPredicted RBP29.89■■■□□ 2.38
DDR1-279ENST00000515529 DDX49Q9Y6V7 483 aaKnown RBP29.89■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms