RNA–Protein interactions for RNA: ENST00000514013.1

SH3D19-209, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-209ENST00000514013 AGBL1Q96MI9 1066 aa10.96□□□□□ -0.65
SH3D19-209ENST00000514013 ARHGEF10LQ9HCE6 1279 aa10.96□□□□□ -0.65
SH3D19-209ENST00000514013 COG5Q9UP83 839 aa10.96□□□□□ -0.65
SH3D19-209ENST00000514013 BCAR3O75815 825 aa10.95□□□□□ -0.66
SH3D19-209ENST00000514013 TRIM27P14373 513 aa10.95□□□□□ -0.66
SH3D19-209ENST00000514013 PDE6AP16499 860 aa10.95□□□□□ -0.66
SH3D19-209ENST00000514013 RARSP54136 660 aaKnown RBP10.95□□□□□ -0.66
SH3D19-209ENST00000514013 GRB10Q13322 594 aa10.95□□□□□ -0.66
SH3D19-209ENST00000514013 ITGA7Q13683 1181 aa10.95□□□□□ -0.66
SH3D19-209ENST00000514013 ARMCX2Q7L311 632 aa10.95□□□□□ -0.66
SH3D19-209ENST00000514013 SSH3Q8TE77 659 aa10.95□□□□□ -0.66
SH3D19-209ENST00000514013 ARNTL2Q8WYA1 636 aa10.95□□□□□ -0.66
SH3D19-209ENST00000514013 ANKS1AQ92625 1134 aa10.95□□□□□ -0.66
SH3D19-209ENST00000514013 HLA-CQ95604 372 aa10.95□□□□□ -0.66
SH3D19-209ENST00000514013 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.95□□□□□ -0.66
SH3D19-209ENST00000514013 TEX13BQ9BXU2 312 aa10.95□□□□□ -0.66
SH3D19-209ENST00000514013 TCRBV5S4A2TA0A5A2 114 aa10.94□□□□□ -0.66
SH3D19-209ENST00000514013 PRR33A8MZF0 331 aa10.94□□□□□ -0.66
SH3D19-209ENST00000514013 SURF6O75683 361 aaKnown RBP10.94□□□□□ -0.66
SH3D19-209ENST00000514013 GGCXP38435 758 aa10.94□□□□□ -0.66
SH3D19-209ENST00000514013 SLC4A3P48751 1232 aa10.94□□□□□ -0.66
SH3D19-209ENST00000514013 NHLH1Q02575 133 aa10.94□□□□□ -0.66
SH3D19-209ENST00000514013 OS9Q13438 667 aaPredicted RBP10.94□□□□□ -0.66
SH3D19-209ENST00000514013 TMEM67Q5HYA8 995 aa10.94□□□□□ -0.66
SH3D19-209ENST00000514013 CCDC144CPQ8IYA2 1237 aa10.94□□□□□ -0.66
SH3D19-209ENST00000514013 DDX11Q96FC9 970 aa10.94□□□□□ -0.66
SH3D19-209ENST00000514013 CRNKL1Q9BZJ0 848 aaKnown RBP10.94□□□□□ -0.66
SH3D19-209ENST00000514013 ABHD16BQ9H3Z7 469 aa10.94□□□□□ -0.66
SH3D19-209ENST00000514013 SH2D4AQ9H788 454 aa10.94□□□□□ -0.66
SH3D19-209ENST00000514013 C1orf115Q9H7X2 142 aa10.94□□□□□ -0.66
SH3D19-209ENST00000514013 ARMT1Q9H993 441 aa10.94□□□□□ -0.66
SH3D19-209ENST00000514013 SPC25Q9HBM1 224 aa10.94□□□□□ -0.66
SH3D19-209ENST00000514013 GNEQ9Y223 722 aaKnown RBP10.94□□□□□ -0.66
SH3D19-209ENST00000514013 ZNF532Q9HCE3 1301 aa10.93□□□□□ -0.66
SH3D19-209ENST00000514013 ANP32CO43423 234 aa10.93□□□□□ -0.66
SH3D19-209ENST00000514013 CHGBP05060 677 aa10.93□□□□□ -0.66
SH3D19-209ENST00000514013 CYP2C9P11712 490 aa10.93□□□□□ -0.66
SH3D19-209ENST00000514013 COPB2P35606 906 aa10.93□□□□□ -0.66
SH3D19-209ENST00000514013 CDK8P49336 464 aa10.93□□□□□ -0.66
SH3D19-209ENST00000514013 CNTN2Q02246 1040 aa10.93□□□□□ -0.66
SH3D19-209ENST00000514013 NUDT18Q6ZVK8 323 aa10.93□□□□□ -0.66
SH3D19-209ENST00000514013 DEFB128Q7Z7B8 93 aa10.93□□□□□ -0.66
SH3D19-209ENST00000514013 CPXCR1Q8N123 301 aa10.93□□□□□ -0.66
SH3D19-209ENST00000514013 ARHGAP45Q92619 1136 aa10.93□□□□□ -0.66
SH3D19-209ENST00000514013 SLF1Q9BQI6 1058 aa10.93□□□□□ -0.66
SH3D19-209ENST00000514013 TRMT13Q9NUP7 481 aaKnown RBP10.93□□□□□ -0.66
SH3D19-209ENST00000514013 SWAP70Q9UH65 585 aa10.93□□□□□ -0.66
SH3D19-209ENST00000514013 CACNA1AO00555 2505 aa10.92□□□□□ -0.66
SH3D19-209ENST00000514013 LCHNA4D1U4 455 aa10.92□□□□□ -0.66
SH3D19-209ENST00000514013 RAD21O60216 631 aa10.92□□□□□ -0.66
SH3D19-209ENST00000514013 SMPD1P17405 629 aa10.92□□□□□ -0.66
SH3D19-209ENST00000514013 TNFAIP2Q03169 654 aa10.92□□□□□ -0.66
SH3D19-209ENST00000514013 FSCN1Q16658 493 aaKnown RBP10.92□□□□□ -0.66
SH3D19-209ENST00000514013 SLC9C2Q5TAH2 1124 aa10.92□□□□□ -0.66
SH3D19-209ENST00000514013 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.92□□□□□ -0.66
SH3D19-209ENST00000514013 TMCO2Q7Z6W1 182 aaPredicted RBP10.92□□□□□ -0.66
SH3D19-209ENST00000514013 TLK2Q86UE8 772 aa10.92□□□□□ -0.66
SH3D19-209ENST00000514013 PPP1R13LQ8WUF5 828 aa10.92□□□□□ -0.66
SH3D19-209ENST00000514013 CLUAP1Q96AJ1 413 aa10.92□□□□□ -0.66
SH3D19-209ENST00000514013 FBXL18Q96ME1 805 aa10.92□□□□□ -0.66
SH3D19-209ENST00000514013 ALDH8A1Q9H2A2 487 aaPredicted RBP10.92□□□□□ -0.66
SH3D19-209ENST00000514013 RAVER2Q9HCJ3 691 aaKnown RBP10.92□□□□□ -0.66
SH3D19-209ENST00000514013 PDGFCQ9NRA1 345 aa10.92□□□□□ -0.66
SH3D19-209ENST00000514013 NOP58Q9Y2X3 529 aaKnown RBP10.92□□□□□ -0.66
SH3D19-209ENST00000514013 MCM3APO60318 1980 aa10.92□□□□□ -0.66
SH3D19-209ENST00000514013 GRXCR2A6NFK2 248 aa10.91□□□□□ -0.66
SH3D19-209ENST00000514013 ATP2A1O14983 1001 aa10.91□□□□□ -0.66
SH3D19-209ENST00000514013 NDUFB10O96000 172 aa10.91□□□□□ -0.66
SH3D19-209ENST00000514013 CT47B1P0C2W7 299 aaPredicted RBP10.91□□□□□ -0.66
SH3D19-209ENST00000514013 IL9P15248 144 aa10.91□□□□□ -0.66
SH3D19-209ENST00000514013 ATP8B2P98198 1209 aa10.91□□□□□ -0.66
SH3D19-209ENST00000514013 C12orf60Q5U649 245 aa10.91□□□□□ -0.66
SH3D19-209ENST00000514013 C16orf86Q6ZW13 317 aa10.91□□□□□ -0.66
SH3D19-209ENST00000514013 HERC6Q8IVU3 1022 aa10.91□□□□□ -0.66
SH3D19-209ENST00000514013 FAM178BQ8IXR5 827 aa10.91□□□□□ -0.66
SH3D19-209ENST00000514013 RPUSD2Q8IZ73 545 aaKnown RBP10.91□□□□□ -0.66
SH3D19-209ENST00000514013 GJD3Q8N144 294 aa10.91□□□□□ -0.66
SH3D19-209ENST00000514013 FAM133AQ8N9E0 248 aa10.91□□□□□ -0.66
SH3D19-209ENST00000514013 GDPD5Q8WTR4 605 aa10.91□□□□□ -0.66
SH3D19-209ENST00000514013 CCDC17Q96LX7 622 aa10.91□□□□□ -0.66
SH3D19-209ENST00000514013 KANSL2Q9H9L4 492 aa10.91□□□□□ -0.66
SH3D19-209ENST00000514013 COL4A4P53420 1690 aaPredicted RBP10.91□□□□□ -0.66
SH3D19-209ENST00000514013 ZNF318Q5VUA4 2279 aa10.9□□□□□ -0.66
SH3D19-209ENST00000514013 USP17L12C9JPN9 530 aa10.9□□□□□ -0.66
SH3D19-209ENST00000514013 USP17L21D6R901 530 aa10.9□□□□□ -0.66
SH3D19-209ENST00000514013 DYNC1LI2O43237 492 aaPredicted RBP10.9□□□□□ -0.66
SH3D19-209ENST00000514013 CABYRO75952 493 aa10.9□□□□□ -0.66
SH3D19-209ENST00000514013 MBD4O95243 580 aa10.9□□□□□ -0.66
SH3D19-209ENST00000514013 COPS2P61201 443 aa10.9□□□□□ -0.66
SH3D19-209ENST00000514013 TMED8Q6PL24 325 aaPredicted RBP10.9□□□□□ -0.66
SH3D19-209ENST00000514013 NOL8Q76FK4 1167 aaKnown RBP10.9□□□□□ -0.66
SH3D19-209ENST00000514013 ANKRD35Q8N283 1001 aa10.9□□□□□ -0.66
SH3D19-209ENST00000514013 TMEM57Q8N5G2 664 aa10.9□□□□□ -0.66
SH3D19-209ENST00000514013 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.9□□□□□ -0.66
SH3D19-209ENST00000514013 UIMC1Q96RL1 719 aa10.9□□□□□ -0.66
SH3D19-209ENST00000514013 PHOX2BQ99453 314 aa10.9□□□□□ -0.66
SH3D19-209ENST00000514013 UBE2ZQ9H832 354 aaPredicted RBP10.9□□□□□ -0.66
SH3D19-209ENST00000514013 GOPCQ9HD26 462 aa10.9□□□□□ -0.66
SH3D19-209ENST00000514013 TNKSO95271 1327 aa10.89□□□□□ -0.67
SH3D19-209ENST00000514013 F5H6K3 240 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms