RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 FAM110CQ1W6H9 321 aa11.67□□□□□ -0.54
NEDD9-214ENST00000513989 USH1GQ495M9 461 aa11.67□□□□□ -0.54
NEDD9-214ENST00000513989 MCTP2Q6DN12 878 aa11.67□□□□□ -0.54
NEDD9-214ENST00000513989 NCAPG2Q86XI2 1143 aa11.67□□□□□ -0.54
NEDD9-214ENST00000513989 SPRYD3Q8NCJ5 442 aa11.67□□□□□ -0.54
NEDD9-214ENST00000513989 SHCBP1Q8NEM2 672 aa11.67□□□□□ -0.54
NEDD9-214ENST00000513989 C8orf76Q96K31 380 aa11.67□□□□□ -0.54
NEDD9-214ENST00000513989 AGBL1Q96MI9 1066 aa11.67□□□□□ -0.54
NEDD9-214ENST00000513989 TRERF1Q96PN7 1200 aa11.67□□□□□ -0.54
NEDD9-214ENST00000513989 PSTPIP2Q9H939 334 aa11.67□□□□□ -0.54
NEDD9-214ENST00000513989 FOXD4L1Q9NU39 408 aa11.67□□□□□ -0.54
NEDD9-214ENST00000513989 MAP3K20Q9NYL2 800 aaKnown RBP11.67□□□□□ -0.54
NEDD9-214ENST00000513989 MORF4L1Q9UBU8 362 aa11.67□□□□□ -0.54
NEDD9-214ENST00000513989 GREB1LQ9C091 1923 aaPredicted RBP11.66□□□□□ -0.54
NEDD9-214ENST00000513989 SMCO2A6NFE2 343 aa11.66□□□□□ -0.54
NEDD9-214ENST00000513989 H0YGN5 161 aa11.66□□□□□ -0.54
NEDD9-214ENST00000513989 STRNO43815 780 aa11.66□□□□□ -0.54
NEDD9-214ENST00000513989 CCL5P13501 91 aa11.66□□□□□ -0.54
NEDD9-214ENST00000513989 FDPSP14324 419 aaKnown RBP11.66□□□□□ -0.54
NEDD9-214ENST00000513989 MAPK4P31152 587 aa11.66□□□□□ -0.54
NEDD9-214ENST00000513989 GJA8P48165 433 aa11.66□□□□□ -0.54
NEDD9-214ENST00000513989 FCGRTP55899 365 aa11.66□□□□□ -0.54
NEDD9-214ENST00000513989 ST3GAL1Q11201 340 aa11.66□□□□□ -0.54
NEDD9-214ENST00000513989 GNL2Q13823 731 aaKnown RBP11.66□□□□□ -0.54
NEDD9-214ENST00000513989 PKN1Q16512 942 aa11.66□□□□□ -0.54
NEDD9-214ENST00000513989 SLC35G1Q2M3R5 365 aa11.66□□□□□ -0.54
NEDD9-214ENST00000513989 WDR78Q5VTH9 848 aa11.66□□□□□ -0.54
NEDD9-214ENST00000513989 REPS2Q8NFH8 660 aa11.66□□□□□ -0.54
NEDD9-214ENST00000513989 RAET1EQ8TD07 263 aa11.66□□□□□ -0.54
NEDD9-214ENST00000513989 COA7Q96BR5 231 aa11.66□□□□□ -0.54
NEDD9-214ENST00000513989 UNC93B1Q9H1C4 597 aa11.66□□□□□ -0.54
NEDD9-214ENST00000513989 ACAD9Q9H845 621 aa11.66□□□□□ -0.54
NEDD9-214ENST00000513989 BTBD7Q9P203 1132 aa11.66□□□□□ -0.54
NEDD9-214ENST00000513989 ZNF214Q9UL59 606 aaPredicted RBP11.66□□□□□ -0.54
NEDD9-214ENST00000513989 COLQQ9Y215 455 aaPredicted RBP11.66□□□□□ -0.54
NEDD9-214ENST00000513989 IVNS1ABPQ9Y6Y0 642 aa11.66□□□□□ -0.54
NEDD9-214ENST00000513989 RLFQ13129 1914 aa11.66□□□□□ -0.54
NEDD9-214ENST00000513989 ZNF536O15090 1300 aa11.65□□□□□ -0.54
NEDD9-214ENST00000513989 GCOM1H8Y6P7 765 aaPredicted RBP11.65□□□□□ -0.54
NEDD9-214ENST00000513989 STXBP3O00186 592 aa11.65□□□□□ -0.54
NEDD9-214ENST00000513989 CNMDO75829 334 aa11.65□□□□□ -0.54
NEDD9-214ENST00000513989 GJB1P08034 283 aa11.65□□□□□ -0.54
NEDD9-214ENST00000513989 POLR2MP0CAP2 368 aa11.65□□□□□ -0.54
NEDD9-214ENST00000513989 FCER1AP12319 257 aa11.65□□□□□ -0.54
NEDD9-214ENST00000513989 ELNP15502 786 aa11.65□□□□□ -0.54
NEDD9-214ENST00000513989 ERCC3P19447 782 aa11.65□□□□□ -0.54
NEDD9-214ENST00000513989 HOXD10P28358 340 aa11.65□□□□□ -0.54
NEDD9-214ENST00000513989 FLT3LGP49771 235 aa11.65□□□□□ -0.54
NEDD9-214ENST00000513989 CACNB1Q02641 598 aaPredicted RBP11.65□□□□□ -0.54
NEDD9-214ENST00000513989 C1QBPQ07021 282 aaKnown RBP11.65□□□□□ -0.54
NEDD9-214ENST00000513989 Q3C1V9 767 aa11.65□□□□□ -0.54
NEDD9-214ENST00000513989 WWC2Q6AWC2 1192 aa11.65□□□□□ -0.54
NEDD9-214ENST00000513989 ANKRD35Q8N283 1001 aa11.65□□□□□ -0.54
NEDD9-214ENST00000513989 FBXO18Q8NFZ0 1043 aa11.65□□□□□ -0.54
NEDD9-214ENST00000513989 GPKOWQ92917 476 aaPredicted RBP eCLIP11.65□□□□□ -0.54
NEDD9-214ENST00000513989 MOV10L1Q9BXT6 1211 aaKnown RBP11.65□□□□□ -0.54
NEDD9-214ENST00000513989 TXNRD2Q9NNW7 524 aa11.65□□□□□ -0.54
NEDD9-214ENST00000513989 HOMER2Q9NSB8 354 aa11.65□□□□□ -0.54
NEDD9-214ENST00000513989 RNF146Q9NTX7 359 aa11.65□□□□□ -0.54
NEDD9-214ENST00000513989 VPS54Q9P1Q0 977 aa11.65□□□□□ -0.54
NEDD9-214ENST00000513989 COL6A3P12111 3177 aa11.65□□□□□ -0.54
NEDD9-214ENST00000513989 PARP14Q460N5 1801 aa11.65□□□□□ -0.55
NEDD9-214ENST00000513989 ESYT2A0FGR8 921 aa11.64□□□□□ -0.55
NEDD9-214ENST00000513989 ADCY7P51828 1080 aa11.64□□□□□ -0.55
NEDD9-214ENST00000513989 KCTD2Q14681 263 aa11.64□□□□□ -0.55
NEDD9-214ENST00000513989 SLAIN1Q8ND83 568 aa11.64□□□□□ -0.55
NEDD9-214ENST00000513989 ZMYND12Q9H0C1 365 aa11.64□□□□□ -0.55
NEDD9-214ENST00000513989 RNF208Q9H0X6 261 aa11.64□□□□□ -0.55
NEDD9-214ENST00000513989 EHMT1Q9H9B1 1298 aa11.64□□□□□ -0.55
NEDD9-214ENST00000513989 RIC8AQ9NPQ8 531 aa11.64□□□□□ -0.55
NEDD9-214ENST00000513989 SLC5A4Q9NY91 659 aa11.64□□□□□ -0.55
NEDD9-214ENST00000513989 PCDHA4Q9UN74 947 aa11.64□□□□□ -0.55
NEDD9-214ENST00000513989 PFASO15067 1338 aa11.63□□□□□ -0.55
NEDD9-214ENST00000513989 LAMA2P24043 3122 aaKnown RBP11.63□□□□□ -0.55
NEDD9-214ENST00000513989 B4DLN1 442 aa11.63□□□□□ -0.55
NEDD9-214ENST00000513989 ADCY3O60266 1144 aa11.63□□□□□ -0.55
NEDD9-214ENST00000513989 PEX10O60683 326 aa11.63□□□□□ -0.55
NEDD9-214ENST00000513989 PPP1R11O60927 126 aaPredicted RBP11.63□□□□□ -0.55
NEDD9-214ENST00000513989 CFBP00751 764 aa11.63□□□□□ -0.55
NEDD9-214ENST00000513989 FOSP01100 380 aaPredicted RBP11.63□□□□□ -0.55
NEDD9-214ENST00000513989 INHAP05111 366 aa11.63□□□□□ -0.55
NEDD9-214ENST00000513989 IRF5Q13568 498 aa11.63□□□□□ -0.55
NEDD9-214ENST00000513989 KRT40Q6A162 431 aa11.63□□□□□ -0.55
NEDD9-214ENST00000513989 MCTP1Q6DN14 999 aa11.63□□□□□ -0.55
NEDD9-214ENST00000513989 POTEEQ6S8J3 1075 aa11.63□□□□□ -0.55
NEDD9-214ENST00000513989 NSMFQ6X4W1 530 aa11.63□□□□□ -0.55
NEDD9-214ENST00000513989 RNF207Q6ZRF8 634 aa11.63□□□□□ -0.55
NEDD9-214ENST00000513989 PLEKHH3Q7Z736 793 aa11.63□□□□□ -0.55
NEDD9-214ENST00000513989 ABRAQ8N0Z2 381 aa11.63□□□□□ -0.55
NEDD9-214ENST00000513989 U2AF1L4Q8WU68 220 aaKnown RBP11.63□□□□□ -0.55
NEDD9-214ENST00000513989 MMP19Q99542 508 aa11.63□□□□□ -0.55
NEDD9-214ENST00000513989 MPHOSPH6Q99547 160 aaKnown RBP11.63□□□□□ -0.55
NEDD9-214ENST00000513989 RIPK3Q9Y572 518 aa11.63□□□□□ -0.55
NEDD9-214ENST00000513989 VPS37CA5D8V6 355 aaPredicted RBP11.62□□□□□ -0.55
NEDD9-214ENST00000513989 SPDYE3A6NKU9 549 aa11.62□□□□□ -0.55
NEDD9-214ENST00000513989 PIK3CDO00329 1044 aa11.62□□□□□ -0.55
NEDD9-214ENST00000513989 TNPO2O14787 897 aaKnown RBP11.62□□□□□ -0.55
NEDD9-214ENST00000513989 STX6O43752 255 aa11.62□□□□□ -0.55
NEDD9-214ENST00000513989 MMP1P03956 469 aa11.62□□□□□ -0.55
NEDD9-214ENST00000513989 SYT1P21579 422 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms