RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 ADGRL2O95490 1459 aa6.18□□□□□ -1.42
CLDND1-228ENST00000513873 MEIS1O00470 390 aa6.18□□□□□ -1.42
CLDND1-228ENST00000513873 SMAD7O15105 426 aaKnown RBP6.18□□□□□ -1.42
CLDND1-228ENST00000513873 STK10O94804 968 aaKnown RBP6.18□□□□□ -1.42
CLDND1-228ENST00000513873 PRAMEF1O95521 474 aa6.18□□□□□ -1.42
CLDND1-228ENST00000513873 ITGA4P13612 1032 aa6.18□□□□□ -1.42
CLDND1-228ENST00000513873 NCAPHQ15003 741 aa6.18□□□□□ -1.42
CLDND1-228ENST00000513873 FXNQ16595 210 aa6.18□□□□□ -1.42
CLDND1-228ENST00000513873 ANKRD39Q53RE8 183 aa6.18□□□□□ -1.42
CLDND1-228ENST00000513873 LARP1BQ659C4 914 aaKnown RBP6.18□□□□□ -1.42
CLDND1-228ENST00000513873 VHLLQ6RSH7 139 aa6.18□□□□□ -1.42
CLDND1-228ENST00000513873 RNF111Q6ZNA4 994 aa6.18□□□□□ -1.42
CLDND1-228ENST00000513873 TMC3Q7Z5M5 1100 aa6.18□□□□□ -1.42
CLDND1-228ENST00000513873 GMLQ99445 158 aa6.18□□□□□ -1.42
CLDND1-228ENST00000513873 PRDM7Q9NQW5 492 aa6.18□□□□□ -1.42
CLDND1-228ENST00000513873 GFOD1Q9NXC2 390 aa6.18□□□□□ -1.42
CLDND1-228ENST00000513873 PHLPP1O60346 1717 aa6.18□□□□□ -1.42
CLDND1-228ENST00000513873 ABCC1P33527 1531 aa6.18□□□□□ -1.42
CLDND1-228ENST00000513873 KDM5DQ9BY66 1539 aa6.18□□□□□ -1.42
CLDND1-228ENST00000513873 LTBP3Q9NS15 1303 aa6.18□□□□□ -1.42
CLDND1-228ENST00000513873 SETBP1Q9Y6X0 1596 aa6.18□□□□□ -1.42
CLDND1-228ENST00000513873 KIF15Q9NS87 1388 aa6.18□□□□□ -1.42
CLDND1-228ENST00000513873 ANKRD50Q9ULJ7 1429 aa6.17□□□□□ -1.42
CLDND1-228ENST00000513873 SHISA3A0PJX4 238 aa6.17□□□□□ -1.42
CLDND1-228ENST00000513873 WASH4PA8MWX3 477 aa6.17□□□□□ -1.42
CLDND1-228ENST00000513873 C9IYK1 514 aa6.17□□□□□ -1.42
CLDND1-228ENST00000513873 PPM1BO75688 479 aa6.17□□□□□ -1.42
CLDND1-228ENST00000513873 ESR1P03372 595 aa6.17□□□□□ -1.42
CLDND1-228ENST00000513873 FGRP09769 529 aa6.17□□□□□ -1.42
CLDND1-228ENST00000513873 RAC2P15153 192 aa6.17□□□□□ -1.42
CLDND1-228ENST00000513873 ENDOUP21128 410 aaKnown RBP6.17□□□□□ -1.42
CLDND1-228ENST00000513873 RPL10P27635 214 aaKnown RBP6.17□□□□□ -1.42
CLDND1-228ENST00000513873 ETFBP38117 255 aa6.17□□□□□ -1.42
CLDND1-228ENST00000513873 GAB4Q2WGN9 574 aa6.17□□□□□ -1.42
CLDND1-228ENST00000513873 AXDND1Q5T1B0 1012 aaPredicted RBP6.17□□□□□ -1.42
CLDND1-228ENST00000513873 KIAA1211LQ6NV74 962 aa6.17□□□□□ -1.42
CLDND1-228ENST00000513873 MCF2L2Q86YR7 1114 aa6.17□□□□□ -1.42
CLDND1-228ENST00000513873 LRRC56Q8IYG6 542 aaPredicted RBP6.17□□□□□ -1.42
CLDND1-228ENST00000513873 FAM169BQ8N8A8 192 aa6.17□□□□□ -1.42
CLDND1-228ENST00000513873 TCTN2Q96GX1 697 aa6.17□□□□□ -1.42
CLDND1-228ENST00000513873 PPP1R16BQ96T49 567 aa6.17□□□□□ -1.42
CLDND1-228ENST00000513873 HDAC8Q9BY41 377 aa6.17□□□□□ -1.42
CLDND1-228ENST00000513873 MBNL3Q9NUK0 354 aaKnown RBP6.17□□□□□ -1.42
CLDND1-228ENST00000513873 ZMYM5Q9UJ78 669 aa6.17□□□□□ -1.42
CLDND1-228ENST00000513873 PCDHB10Q9UN67 800 aa6.17□□□□□ -1.42
CLDND1-228ENST00000513873 SF3B6Q9Y3B4 125 aaKnown RBP6.17□□□□□ -1.42
CLDND1-228ENST00000513873 PCDHA11Q9Y5I1 949 aa6.17□□□□□ -1.42
CLDND1-228ENST00000513873 ARHGEF5Q12774 1597 aa6.17□□□□□ -1.42
CLDND1-228ENST00000513873 SPATA31A6Q5VVP1 1343 aa6.17□□□□□ -1.42
CLDND1-228ENST00000513873 ZC3H13Q5T200 1668 aaKnown RBP6.17□□□□□ -1.42
CLDND1-228ENST00000513873 RTEL1-TNFRSF6BF6WH68 1400 aa6.16□□□□□ -1.42
CLDND1-228ENST00000513873 FAM135AQ9P2D6 1515 aa6.16□□□□□ -1.42
CLDND1-228ENST00000513873 UGGT1Q9NYU2 1555 aa6.16□□□□□ -1.42
CLDND1-228ENST00000513873 LRRC10BA6NIK2 292 aa6.16□□□□□ -1.42
CLDND1-228ENST00000513873 U2SURPO15042 1029 aaKnown RBP6.16□□□□□ -1.42
CLDND1-228ENST00000513873 DDAH1O94760 285 aa6.16□□□□□ -1.42
CLDND1-228ENST00000513873 RNASE1P07998 156 aaKnown RBP6.16□□□□□ -1.42
CLDND1-228ENST00000513873 SYPP08247 313 aa6.16□□□□□ -1.42
CLDND1-228ENST00000513873 ZSCAN22P10073 491 aaPredicted RBP6.16□□□□□ -1.42
CLDND1-228ENST00000513873 CD247P20963 164 aa6.16□□□□□ -1.42
CLDND1-228ENST00000513873 CFPP27918 469 aa6.16□□□□□ -1.42
CLDND1-228ENST00000513873 AFMP43652 599 aa6.16□□□□□ -1.42
CLDND1-228ENST00000513873 NOP2P46087 812 aaKnown RBP6.16□□□□□ -1.42
CLDND1-228ENST00000513873 DUSP4Q13115 394 aa6.16□□□□□ -1.42
CLDND1-228ENST00000513873 SNW1Q13573 536 aaKnown RBP6.16□□□□□ -1.42
CLDND1-228ENST00000513873 SF3A1Q15459 793 aaKnown RBP6.16□□□□□ -1.42
CLDND1-228ENST00000513873 DCAF15Q66K64 600 aa6.16□□□□□ -1.42
CLDND1-228ENST00000513873 PPFIBP1Q86W92 1011 aa6.16□□□□□ -1.42
CLDND1-228ENST00000513873 HAUS7Q99871 368 aa6.16□□□□□ -1.42
CLDND1-228ENST00000513873 TRIM55Q9BYV6 548 aa6.16□□□□□ -1.42
CLDND1-228ENST00000513873 ZNF408Q9H9D4 720 aa6.16□□□□□ -1.42
CLDND1-228ENST00000513873 GP6Q9HCN6 339 aa6.16□□□□□ -1.42
CLDND1-228ENST00000513873 FAM53CQ9NYF3 392 aa6.16□□□□□ -1.42
CLDND1-228ENST00000513873 TCFL5Q9UL49 500 aa6.16□□□□□ -1.42
CLDND1-228ENST00000513873 SUGT1Q9Y2Z0 365 aa6.16□□□□□ -1.42
CLDND1-228ENST00000513873 KANK1Q14678 1352 aa6.16□□□□□ -1.42
CLDND1-228ENST00000513873 TNRQ92752 1358 aa6.16□□□□□ -1.42
CLDND1-228ENST00000513873 LRRIQ1Q96JM4 1722 aa6.16□□□□□ -1.42
CLDND1-228ENST00000513873 NLRP1Q9C000 1473 aa6.15□□□□□ -1.42
CLDND1-228ENST00000513873 MBD5Q9P267 1494 aa6.15□□□□□ -1.42
CLDND1-228ENST00000513873 PLXNC1O60486 1568 aa6.15□□□□□ -1.42
CLDND1-228ENST00000513873 GSNP06396 782 aa6.15□□□□□ -1.42
CLDND1-228ENST00000513873 HK2P52789 917 aa6.15□□□□□ -1.42
CLDND1-228ENST00000513873 MEX3CQ5U5Q3 659 aaKnown RBP6.15□□□□□ -1.42
CLDND1-228ENST00000513873 GGT6Q6P531 493 aa6.15□□□□□ -1.42
CLDND1-228ENST00000513873 WFDC3Q8IUB2 231 aa6.15□□□□□ -1.42
CLDND1-228ENST00000513873 SPPL2CQ8IUH8 684 aa6.15□□□□□ -1.42
CLDND1-228ENST00000513873 CKAP2LQ8IYA6 745 aa6.15□□□□□ -1.42
CLDND1-228ENST00000513873 OXR1Q8N573 874 aa6.15□□□□□ -1.42
CLDND1-228ENST00000513873 LINC00116Q8NCU8 138 aa6.15□□□□□ -1.42
CLDND1-228ENST00000513873 LRRN4CLQ8ND94 238 aa6.15□□□□□ -1.42
CLDND1-228ENST00000513873 APBA2Q99767 749 aa6.15□□□□□ -1.42
CLDND1-228ENST00000513873 FOXP3Q9BZS1 431 aa6.15□□□□□ -1.42
CLDND1-228ENST00000513873 WHRNQ9P202 907 aa6.15□□□□□ -1.42
CLDND1-228ENST00000513873 TMEM59LQ9UK28 342 aa6.15□□□□□ -1.42
CLDND1-228ENST00000513873 JAG2Q9Y219 1238 aa6.15□□□□□ -1.42
CLDND1-228ENST00000513873 DIS3Q9Y2L1 958 aaKnown RBP6.15□□□□□ -1.42
CLDND1-228ENST00000513873 ZNF451Q9Y4E5 1061 aa6.15□□□□□ -1.42
CLDND1-228ENST00000513873 FHOD1Q9Y613 1164 aa6.15□□□□□ -1.42
CLDND1-228ENST00000513873 NUP155O75694 1391 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms