RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, humanhuman

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-210ENST00000513582 TRAPPC3O43617 180 aa12.31□□□□□ -0.44
PDCD6-210ENST00000513582 ARID4AP29374 1257 aaPredicted RBP12.31□□□□□ -0.44
PDCD6-210ENST00000513582 PAK2Q13177 524 aa12.31□□□□□ -0.44
PDCD6-210ENST00000513582 BYSLQ13895 437 aaKnown RBP12.31□□□□□ -0.44
PDCD6-210ENST00000513582 GLE1Q53GS7 698 aaKnown RBP12.31□□□□□ -0.44
PDCD6-210ENST00000513582 PPP4R3AQ6IN85 833 aa12.31□□□□□ -0.44
PDCD6-210ENST00000513582 SLC30A9Q6PML9 568 aa12.31□□□□□ -0.44
PDCD6-210ENST00000513582 FNBP4Q8N3X1 1017 aaPredicted RBP12.31□□□□□ -0.44
PDCD6-210ENST00000513582 TRIM58Q8NG06 486 aa12.31□□□□□ -0.44
PDCD6-210ENST00000513582 PLBD2Q8NHP8 589 aa12.31□□□□□ -0.44
PDCD6-210ENST00000513582 SPATA20Q8TB22 786 aa12.31□□□□□ -0.44
PDCD6-210ENST00000513582 NELFBQ8WX92 580 aa12.31□□□□□ -0.44
PDCD6-210ENST00000513582 BAZ2BQ9UIF8 2168 aaKnown RBP12.3□□□□□ -0.44
PDCD6-210ENST00000513582 PLEKP08567 350 aaPredicted RBP12.3□□□□□ -0.44
PDCD6-210ENST00000513582 ARFGAP2Q8N6H7 521 aa12.3□□□□□ -0.44
PDCD6-210ENST00000513582 RAPGEF5Q92565 580 aa12.3□□□□□ -0.44
PDCD6-210ENST00000513582 PRCCQ92733 491 aaPredicted RBP12.3□□□□□ -0.44
PDCD6-210ENST00000513582 CABP5Q9NP86 173 aa12.3□□□□□ -0.44
PDCD6-210ENST00000513582 BSDC1Q9NW68 430 aaPredicted RBP12.3□□□□□ -0.44
PDCD6-210ENST00000513582 BTG4Q9NY30 223 aa12.3□□□□□ -0.44
PDCD6-210ENST00000513582 GGT7Q9UJ14 662 aa12.3□□□□□ -0.44
PDCD6-210ENST00000513582 DIP2AQ14689 1571 aa12.3□□□□□ -0.44
PDCD6-210ENST00000513582 LRRC37A3O60309 1634 aa12.3□□□□□ -0.44
PDCD6-210ENST00000513582 GOLGB1Q14789 3259 aaKnown RBP12.3□□□□□ -0.44
PDCD6-210ENST00000513582 SMIM24O75264 130 aa12.3□□□□□ -0.44
PDCD6-210ENST00000513582 STARD3NLO95772 234 aa12.3□□□□□ -0.44
PDCD6-210ENST00000513582 SPA17Q15506 151 aa12.3□□□□□ -0.44
PDCD6-210ENST00000513582 FAM182BQ5T319 152 aa12.3□□□□□ -0.44
PDCD6-210ENST00000513582 KCNV2Q8TDN2 545 aa12.3□□□□□ -0.44
PDCD6-210ENST00000513582 CCT6BQ92526 530 aa12.3□□□□□ -0.44
PDCD6-210ENST00000513582 FMN2Q9NZ56 1722 aa12.3□□□□□ -0.44
PDCD6-210ENST00000513582 UBN2Q6ZU65 1347 aa12.3□□□□□ -0.44
PDCD6-210ENST00000513582 SEMA3EO15041 775 aa12.29□□□□□ -0.44
PDCD6-210ENST00000513582 SSRP1Q08945 709 aaKnown RBP12.29□□□□□ -0.44
PDCD6-210ENST00000513582 PAK1Q13153 545 aa12.29□□□□□ -0.44
PDCD6-210ENST00000513582 RPUSD2Q8IZ73 545 aaKnown RBP12.29□□□□□ -0.44
PDCD6-210ENST00000513582 PROCA1Q8NCQ7 364 aaPredicted RBP12.29□□□□□ -0.44
PDCD6-210ENST00000513582 KRT12Q99456 494 aa12.29□□□□□ -0.44
PDCD6-210ENST00000513582 NOP53Q9NZM5 478 aaKnown RBP12.29□□□□□ -0.44
PDCD6-210ENST00000513582 SLC4A4Q9Y6R1 1079 aa12.29□□□□□ -0.44
PDCD6-210ENST00000513582 IRS4O14654 1257 aaPredicted RBP12.29□□□□□ -0.44
PDCD6-210ENST00000513582 MARCH6O60337 910 aa12.29□□□□□ -0.44
PDCD6-210ENST00000513582 NEFHP12036 1026 aa12.29□□□□□ -0.44
PDCD6-210ENST00000513582 ELOA2Q8IYF1 753 aaPredicted RBP12.29□□□□□ -0.44
PDCD6-210ENST00000513582 SPICE1Q8N0Z3 855 aa12.29□□□□□ -0.44
PDCD6-210ENST00000513582 MB21D1Q8N884 522 aa12.29□□□□□ -0.44
PDCD6-210ENST00000513582 MDM1Q8TC05 714 aa12.29□□□□□ -0.44
PDCD6-210ENST00000513582 SYMPKQ92797 1274 aaKnown RBP12.29□□□□□ -0.44
PDCD6-210ENST00000513582 NLRP3Q96P20 1036 aa12.29□□□□□ -0.44
PDCD6-210ENST00000513582 GREM2Q9H772 168 aa12.29□□□□□ -0.44
PDCD6-210ENST00000513582 HOMER3Q9NSC5 361 aa12.29□□□□□ -0.44
PDCD6-210ENST00000513582 ANGEL1Q9UNK9 670 aaKnown RBP12.29□□□□□ -0.44
PDCD6-210ENST00000513582 NBPF26B4DH59 902 aa12.29□□□□□ -0.44
PDCD6-210ENST00000513582 BUB1O43683 1085 aa12.29□□□□□ -0.44
PDCD6-210ENST00000513582 PRKAB2O43741 272 aa12.29□□□□□ -0.44
PDCD6-210ENST00000513582 TRIM37O94972 964 aa12.29□□□□□ -0.44
PDCD6-210ENST00000513582 LINGO3P0C6S8 592 aa12.29□□□□□ -0.44
PDCD6-210ENST00000513582 GNAT1P11488 350 aa12.29□□□□□ -0.44
PDCD6-210ENST00000513582 RANBP1P43487 201 aa12.29□□□□□ -0.44
PDCD6-210ENST00000513582 NBPF15Q8N660 670 aa12.29□□□□□ -0.44
PDCD6-210ENST00000513582 CCDC42Q96M95 316 aa12.29□□□□□ -0.44
PDCD6-210ENST00000513582 DNAJC7Q99615 494 aa12.29□□□□□ -0.44
PDCD6-210ENST00000513582 COPRSQ9NQ92 184 aa12.29□□□□□ -0.44
PDCD6-210ENST00000513582 CNOT8Q9UFF9 292 aaKnown RBP12.29□□□□□ -0.44
PDCD6-210ENST00000513582 NOVA2Q9UNW9 492 aaKnown RBP12.29□□□□□ -0.44
PDCD6-210ENST00000513582 HYOU1Q9Y4L1 999 aa12.29□□□□□ -0.44
PDCD6-210ENST00000513582 RFX7Q2KHR2 1363 aa12.29□□□□□ -0.44
PDCD6-210ENST00000513582 DCDC2CA8MYV0 355 aa12.28□□□□□ -0.44
PDCD6-210ENST00000513582 B4DLN1 442 aa12.28□□□□□ -0.44
PDCD6-210ENST00000513582 DNAJC8O75937 253 aaPredicted RBP12.28□□□□□ -0.44
PDCD6-210ENST00000513582 PHKA1P46020 1223 aa12.28□□□□□ -0.44
PDCD6-210ENST00000513582 MFSD6Q6ZSS7 791 aa12.28□□□□□ -0.44
PDCD6-210ENST00000513582 ZNF513Q8N8E2 541 aaPredicted RBP12.28□□□□□ -0.44
PDCD6-210ENST00000513582 OXER1Q8TDS5 423 aa12.28□□□□□ -0.44
PDCD6-210ENST00000513582 CASKIN2Q8WXE0 1202 aa12.28□□□□□ -0.44
PDCD6-210ENST00000513582 TSC22D3Q99576 134 aa12.28□□□□□ -0.44
PDCD6-210ENST00000513582 VAT1LQ9HCJ6 419 aa12.28□□□□□ -0.44
PDCD6-210ENST00000513582 GDAQ9Y2T3 454 aa12.28□□□□□ -0.44
PDCD6-210ENST00000513582 ZNF532Q9HCE3 1301 aa12.28□□□□□ -0.44
PDCD6-210ENST00000513582 FAM205CA6NFA0 338 aa12.28□□□□□ -0.44
PDCD6-210ENST00000513582 PARP1P09874 1014 aaKnown RBP12.28□□□□□ -0.44
PDCD6-210ENST00000513582 PAPOLAP51003 745 aaKnown RBP12.28□□□□□ -0.44
PDCD6-210ENST00000513582 SPAG1Q07617 926 aa12.28□□□□□ -0.44
PDCD6-210ENST00000513582 MAP3K12Q12852 859 aa12.28□□□□□ -0.44
PDCD6-210ENST00000513582 TBC1D25Q3MII6 688 aa12.28□□□□□ -0.44
PDCD6-210ENST00000513582 TYW1BQ6NUM6 668 aa12.28□□□□□ -0.44
PDCD6-210ENST00000513582 APOA5Q6Q788 366 aa12.28□□□□□ -0.44
PDCD6-210ENST00000513582 CYB5R4Q7L1T6 521 aa12.28□□□□□ -0.44
PDCD6-210ENST00000513582 SDR42E1Q8WUS8 393 aa12.28□□□□□ -0.44
PDCD6-210ENST00000513582 IFIH1Q9BYX4 1025 aaKnown RBP12.28□□□□□ -0.44
PDCD6-210ENST00000513582 TMBIM4Q9HC24 238 aa12.28□□□□□ -0.44
PDCD6-210ENST00000513582 PAPOLBQ9NRJ5 636 aaKnown RBP12.28□□□□□ -0.44
PDCD6-210ENST00000513582 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.28□□□□□ -0.442e-10■■■■■ 60.9
PDCD6-210ENST00000513582 STK38LQ9Y2H1 464 aa12.28□□□□□ -0.44
PDCD6-210ENST00000513582 SRPRBQ9Y5M8 271 aaKnown RBP12.28□□□□□ -0.44
PDCD6-210ENST00000513582 USO1O60763 962 aaKnown RBP12.28□□□□□ -0.44
PDCD6-210ENST00000513582 LGR5O75473 907 aa12.28□□□□□ -0.44
PDCD6-210ENST00000513582 CTNNA1P35221 906 aaKnown RBP12.28□□□□□ -0.44
PDCD6-210ENST00000513582 CTCFP49711 727 aaPredicted RBP12.28□□□□□ -0.44
PDCD6-210ENST00000513582 USP4Q13107 963 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms