RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 PDLIM7Q9NR12 457 aa8.09□□□□□ -1.11
CHD1-209ENST00000512844 CARMIL2Q6F5E8 1435 aa8.09□□□□□ -1.11
CHD1-209ENST00000512844 KDM2BQ8NHM5 1336 aa8.08□□□□□ -1.12
CHD1-209ENST00000512844 ZNF503-AS2A6NEH8 195 aa8.08□□□□□ -1.12
CHD1-209ENST00000512844 PRODHO43272 600 aa8.08□□□□□ -1.12
CHD1-209ENST00000512844 APPP05067 770 aa8.08□□□□□ -1.12
CHD1-209ENST00000512844 GALK1P51570 392 aa8.08□□□□□ -1.12
CHD1-209ENST00000512844 MAP4K2Q12851 820 aa8.08□□□□□ -1.12
CHD1-209ENST00000512844 BICRALQ6AI39 1079 aa8.08□□□□□ -1.12
CHD1-209ENST00000512844 NSMFQ6X4W1 530 aa8.08□□□□□ -1.12
CHD1-209ENST00000512844 SPATC1Q76KD6 591 aa8.08□□□□□ -1.12
CHD1-209ENST00000512844 ACSL6Q9UKU0 697 aa8.08□□□□□ -1.12
CHD1-209ENST00000512844 SCG5P05408 212 aa8.07□□□□□ -1.12
CHD1-209ENST00000512844 TMEM132EQ6IEE7 984 aa8.07□□□□□ -1.12
CHD1-209ENST00000512844 LZTR1Q8N653 840 aa8.07□□□□□ -1.12
CHD1-209ENST00000512844 TMEM145Q8NBT3 493 aa8.07□□□□□ -1.12
CHD1-209ENST00000512844 SLC38A3Q99624 504 aa8.07□□□□□ -1.12
CHD1-209ENST00000512844 LNPKQ9C0E8 428 aa8.07□□□□□ -1.12
CHD1-209ENST00000512844 BTG4Q9NY30 223 aa8.07□□□□□ -1.12
CHD1-209ENST00000512844 DBR1Q9UK59 544 aaKnown RBP8.07□□□□□ -1.12
CHD1-209ENST00000512844 NOTOA8MTQ0 251 aa8.06□□□□□ -1.12
CHD1-209ENST00000512844 ABLIM1O14639 778 aa8.06□□□□□ -1.12
CHD1-209ENST00000512844 FARP2O94887 1054 aaPredicted RBP8.06□□□□□ -1.12
CHD1-209ENST00000512844 FGFR1P11362 822 aa8.06□□□□□ -1.12
CHD1-209ENST00000512844 TACR1P25103 407 aa8.06□□□□□ -1.12
CHD1-209ENST00000512844 LTBRP36941 435 aa8.06□□□□□ -1.12
CHD1-209ENST00000512844 TXKP42681 527 aa8.06□□□□□ -1.12
CHD1-209ENST00000512844 GTF2A2P52657 109 aa8.06□□□□□ -1.12
CHD1-209ENST00000512844 RPL11P62913 178 aaKnown RBP8.06□□□□□ -1.12
CHD1-209ENST00000512844 PRSS53Q2L4Q9 553 aa8.06□□□□□ -1.12
CHD1-209ENST00000512844 ACBD5Q5T8D3 534 aaPredicted RBP8.06□□□□□ -1.12
CHD1-209ENST00000512844 USP53Q70EK8 1073 aa8.06□□□□□ -1.12
CHD1-209ENST00000512844 ZNF605Q86T29 641 aa8.06□□□□□ -1.12
CHD1-209ENST00000512844 NPLOC4Q8TAT6 608 aa8.06□□□□□ -1.12
CHD1-209ENST00000512844 FRS2Q8WU20 508 aa8.06□□□□□ -1.12
CHD1-209ENST00000512844 CHAMP1Q96JM3 812 aa8.06□□□□□ -1.12
CHD1-209ENST00000512844 DNAJC7Q99615 494 aa8.06□□□□□ -1.12
CHD1-209ENST00000512844 ARHGEF4Q9NR80 690 aa8.06□□□□□ -1.12
CHD1-209ENST00000512844 CDK11AQ9UQ88 783 aaPredicted RBP8.06□□□□□ -1.12
CHD1-209ENST00000512844 FAM221BA6H8Z2 402 aa8.05□□□□□ -1.12
CHD1-209ENST00000512844 PABPC1P11940 636 aaKnown RBP8.05□□□□□ -1.12
CHD1-209ENST00000512844 GRIA2P42262 883 aa8.05□□□□□ -1.12
CHD1-209ENST00000512844 RAB3GAP1Q15042 981 aa8.05□□□□□ -1.12
CHD1-209ENST00000512844 SF1Q15637 639 aaKnown RBP8.05□□□□□ -1.12
CHD1-209ENST00000512844 CCDC144BQ3MJ40 725 aa8.05□□□□□ -1.12
CHD1-209ENST00000512844 ZC3H12BQ5HYM0 836 aaKnown RBP8.05□□□□□ -1.12
CHD1-209ENST00000512844 PRR23BQ6ZRT6 265 aa8.05□□□□□ -1.12
CHD1-209ENST00000512844 NLGN2Q8NFZ4 835 aa8.05□□□□□ -1.12
CHD1-209ENST00000512844 SHISA4Q96DD7 197 aa8.05□□□□□ -1.12
CHD1-209ENST00000512844 GULP1Q9UBP9 304 aa8.05□□□□□ -1.12
CHD1-209ENST00000512844 RWDD3Q9Y3V2 267 aa8.05□□□□□ -1.12
CHD1-209ENST00000512844 TIMM13Q9Y5L4 95 aaPredicted RBP8.05□□□□□ -1.12
CHD1-209ENST00000512844 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.05□□□□□ -1.12
CHD1-209ENST00000512844 C7orf72A4D263 438 aa8.04□□□□□ -1.12
CHD1-209ENST00000512844 NUDT19A8MXV4 375 aa8.04□□□□□ -1.12
CHD1-209ENST00000512844 MVKQ03426 396 aa8.04□□□□□ -1.12
CHD1-209ENST00000512844 NR1I3Q14994 352 aa8.04□□□□□ -1.12
CHD1-209ENST00000512844 PKN1Q16512 942 aa8.04□□□□□ -1.12
CHD1-209ENST00000512844 SCUBE1Q8IWY4 988 aa8.04□□□□□ -1.12
CHD1-209ENST00000512844 ZBTB38Q8NAP3 1195 aaPredicted RBP8.04□□□□□ -1.12
CHD1-209ENST00000512844 FBXO15Q8NCQ5 510 aaPredicted RBP8.04□□□□□ -1.12
CHD1-209ENST00000512844 SLC26A8Q96RN1 970 aa8.04□□□□□ -1.12
CHD1-209ENST00000512844 NUDT5Q9UKK9 219 aa8.04□□□□□ -1.12
CHD1-209ENST00000512844 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.03□□□□□ -1.12
CHD1-209ENST00000512844 DIAPH1O60610 1272 aaKnown RBP8.03□□□□□ -1.12
CHD1-209ENST00000512844 FUCA1P04066 466 aa8.03□□□□□ -1.12
CHD1-209ENST00000512844 ERVFRD-1P60508 538 aa8.03□□□□□ -1.12
CHD1-209ENST00000512844 SUMO1P63165 101 aaKnown RBP8.03□□□□□ -1.12
CHD1-209ENST00000512844 KIR3DS1Q14943 382 aa8.03□□□□□ -1.12
CHD1-209ENST00000512844 LONRF2Q1L5Z9 754 aa8.03□□□□□ -1.12
CHD1-209ENST00000512844 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.03□□□□□ -1.12
CHD1-209ENST00000512844 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.03□□□□□ -1.122e-10■■■■■ 42.7
CHD1-209ENST00000512844 MARCH2Q9P0N8 246 aa8.03□□□□□ -1.12
CHD1-209ENST00000512844 COA3Q9Y2R0 106 aaPredicted RBP8.03□□□□□ -1.12
CHD1-209ENST00000512844 TRBV23-1A0A0A0MS06 115 aa8.02□□□□□ -1.13
CHD1-209ENST00000512844 DLX3O60479 287 aa8.02□□□□□ -1.13
CHD1-209ENST00000512844 SDHBP21912 280 aa8.02□□□□□ -1.13
CHD1-209ENST00000512844 SLC35F1Q5T1Q4 408 aa8.02□□□□□ -1.13
CHD1-209ENST00000512844 ZSWIM2Q8NEG5 633 aa8.02□□□□□ -1.13
CHD1-209ENST00000512844 THAP3Q8WTV1 239 aaPredicted RBP8.02□□□□□ -1.13
CHD1-209ENST00000512844 DCAF4Q8WV16 495 aa8.02□□□□□ -1.13
CHD1-209ENST00000512844 TRMT2BQ96GJ1 504 aaKnown RBP8.02□□□□□ -1.13
CHD1-209ENST00000512844 FAM84AQ96KN4 292 aa8.02□□□□□ -1.13
CHD1-209ENST00000512844 PPP1R16BQ96T49 567 aa8.02□□□□□ -1.13
CHD1-209ENST00000512844 TNFRSF12AQ9NP84 129 aa8.02□□□□□ -1.13
CHD1-209ENST00000512844 SIRT5Q9NXA8 310 aa8.02□□□□□ -1.13
CHD1-209ENST00000512844 PCDHA2Q9Y5H9 948 aa8.02□□□□□ -1.13
CHD1-209ENST00000512844 CYBBP04839 570 aa8.01□□□□□ -1.13
CHD1-209ENST00000512844 MSL3P1P0C860 447 aa8.01□□□□□ -1.13
CHD1-209ENST00000512844 CEBPAP49715 358 aaPredicted RBP8.01□□□□□ -1.13
CHD1-209ENST00000512844 PAQR3Q6TCH7 311 aa8.01□□□□□ -1.13
CHD1-209ENST00000512844 KREMEN2Q8NCW0 462 aa8.01□□□□□ -1.13
CHD1-209ENST00000512844 KRTAP4-12Q9BQ66 201 aa8.01□□□□□ -1.13
CHD1-209ENST00000512844 PHF20Q9BVI0 1012 aa8.01□□□□□ -1.13
CHD1-209ENST00000512844 HRKO00198 91 aa8□□□□□ -1.13
CHD1-209ENST00000512844 EFEMP2O95967 443 aa8□□□□□ -1.13
CHD1-209ENST00000512844 FAM153BP0C7A2 387 aa8□□□□□ -1.13
CHD1-209ENST00000512844 INF2Q27J81 1249 aa8□□□□□ -1.13
CHD1-209ENST00000512844 YOD1Q5VVQ6 348 aaPredicted RBP8□□□□□ -1.13
CHD1-209ENST00000512844 OGFOD2Q6N063 350 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms