RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 FOSL1P15407 271 aa7.29□□□□□ -1.24
CHD1-208ENST00000512392 CAP2P40123 477 aa7.29□□□□□ -1.24
CHD1-208ENST00000512392 GRK6P43250 576 aa7.29□□□□□ -1.24
CHD1-208ENST00000512392 TM4SF4P48230 202 aa7.29□□□□□ -1.24
CHD1-208ENST00000512392 FCGRTP55899 365 aa7.29□□□□□ -1.24
CHD1-208ENST00000512392 ZNF252P-AS1Q0IIN9 211 aa7.29□□□□□ -1.24
CHD1-208ENST00000512392 SPEM2Q0P670 501 aa7.29□□□□□ -1.24
CHD1-208ENST00000512392 ANKRD45Q5TZF3 282 aa7.29□□□□□ -1.24
CHD1-208ENST00000512392 SPATA1Q5VX52 437 aa7.29□□□□□ -1.24
CHD1-208ENST00000512392 ANKRD13BQ86YJ7 626 aa7.29□□□□□ -1.24
CHD1-208ENST00000512392 RBBP8NLQ8NC74 664 aaPredicted RBP7.29□□□□□ -1.24
CHD1-208ENST00000512392 RSRC1Q96IZ7 334 aaKnown RBP7.29□□□□□ -1.24
CHD1-208ENST00000512392 ANTXR1Q9H6X2 564 aa7.29□□□□□ -1.24
CHD1-208ENST00000512392 USP20Q9Y2K6 914 aa7.29□□□□□ -1.24
CHD1-208ENST00000512392 TNPO3Q9Y5L0 923 aaKnown RBP7.29□□□□□ -1.24
CHD1-208ENST00000512392 SNCAIPQ9Y6H5 919 aa7.29□□□□□ -1.24
CHD1-208ENST00000512392 ITIH6Q6UXX5 1313 aa7.29□□□□□ -1.24
CHD1-208ENST00000512392 TPP1O14773 563 aa7.29□□□□□ -1.24
CHD1-208ENST00000512392 DDX3YO15523 660 aaKnown RBP7.29□□□□□ -1.24
CHD1-208ENST00000512392 SLURP2P0DP57 97 aa7.29□□□□□ -1.24
CHD1-208ENST00000512392 RLBP1P12271 317 aa7.29□□□□□ -1.24
CHD1-208ENST00000512392 CCINQ13939 588 aa7.29□□□□□ -1.24
CHD1-208ENST00000512392 TPTE2Q6XPS3 522 aa7.29□□□□□ -1.24
CHD1-208ENST00000512392 FASTKD5Q7L8L6 764 aaKnown RBP7.29□□□□□ -1.24
CHD1-208ENST00000512392 TRIM42Q8IWZ5 723 aa7.29□□□□□ -1.24
CHD1-208ENST00000512392 CMTR1Q8N1G2 835 aaKnown RBP7.29□□□□□ -1.24
CHD1-208ENST00000512392 ACRBPQ8NEB7 543 aa7.29□□□□□ -1.24
CHD1-208ENST00000512392 SNX29Q8TEQ0 813 aa7.29□□□□□ -1.24
CHD1-208ENST00000512392 SPAG5Q96R06 1193 aa7.29□□□□□ -1.24
CHD1-208ENST00000512392 ISCA1Q9BUE6 129 aa7.29□□□□□ -1.24
CHD1-208ENST00000512392 GSX2Q9BZM3 304 aa7.29□□□□□ -1.24
CHD1-208ENST00000512392 TBK1Q9UHD2 729 aa7.29□□□□□ -1.24
CHD1-208ENST00000512392 ZNF112Q9UJU3 913 aa7.29□□□□□ -1.24
CHD1-208ENST00000512392 GJD2Q9UKL4 321 aa7.29□□□□□ -1.24
CHD1-208ENST00000512392 TRIM64A6NGJ6 449 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 TRIM64BA6NI03 449 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 RRN3P2A6NIE6 340 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 H3BRJ5 948 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 ADAMTS2O95450 1211 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 EGFRP00533 1210 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 RPLP1P05386 114 aaKnown RBP7.28□□□□□ -1.24
CHD1-208ENST00000512392 POU3F2P20265 443 aaPredicted RBP7.28□□□□□ -1.24
CHD1-208ENST00000512392 NEUROD1Q13562 356 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 PLCB4Q15147 1175 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 LLGL1Q15334 1064 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 DDB1Q16531 1140 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 RILPL1Q5EBL4 403 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 CCDC158Q5M9N0 1113 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 GPR155Q7Z3F1 870 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 DDX11Q96FC9 970 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 TBCBQ99426 244 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 MAP3K14Q99558 947 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 SLC30A3Q99726 388 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 LRRC3Q9BY71 257 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 MYLK2Q9H1R3 596 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 TRIM39Q9HCM9 518 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 IFT80Q9P2H3 777 aaPredicted RBP7.28□□□□□ -1.24
CHD1-208ENST00000512392 LOC102724428A0A0B4J2F2 783 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 TRIM75PA6NK02 468 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 EREGO14944 169 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 ECEL1O95672 775 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 TPM2P07951 284 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 PYGMP11217 842 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 ZNF165P49910 485 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 SIK1P57059 783 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 UVSSAQ2YD98 709 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 CYP26C1Q6V0L0 522 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 AHI1Q8N157 1196 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 LRRC47Q8N1G4 583 aaKnown RBP7.28□□□□□ -1.24
CHD1-208ENST00000512392 SLC35G2Q8TBE7 412 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 UBXN10Q96LJ8 280 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 AIFM3Q96NN9 605 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 SLC26A6Q9BXS9 759 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 SLC13A1Q9BZW2 595 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 IFT22Q9H7X7 185 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 ATP6V0A4Q9HBG4 840 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 ARHGEF4Q9NR80 690 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 ARHGAP28Q9P2N2 729 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 CDC23Q9UJX2 597 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 FNDC3AQ9Y2H6 1198 aaKnown RBP7.28□□□□□ -1.24
CHD1-208ENST00000512392 GIT1Q9Y2X7 761 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 PCDHGB6Q9Y5F9 930 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 KCNMB2Q9Y691 235 aa7.28□□□□□ -1.24
CHD1-208ENST00000512392 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.28□□□□□ -1.24
CHD1-208ENST00000512392 FAM221AA4D161 298 aa7.27□□□□□ -1.25
CHD1-208ENST00000512392 PHACTR2O75167 634 aa7.27□□□□□ -1.25
CHD1-208ENST00000512392 BPIP17213 487 aa7.27□□□□□ -1.25
CHD1-208ENST00000512392 RECQLP46063 649 aaPredicted RBP7.27□□□□□ -1.25
CHD1-208ENST00000512392 PPP2R5BQ15173 497 aa7.27□□□□□ -1.25
CHD1-208ENST00000512392 PTPN14Q15678 1187 aa7.27□□□□□ -1.25
CHD1-208ENST00000512392 ZNF468Q5VIY5 522 aaPredicted RBP7.27□□□□□ -1.25
CHD1-208ENST00000512392 TLDC1Q6P9B6 456 aa7.27□□□□□ -1.25
CHD1-208ENST00000512392 AGMOQ6ZNB7 445 aa7.27□□□□□ -1.25
CHD1-208ENST00000512392 SV2BQ7L1I2 683 aa7.27□□□□□ -1.25
CHD1-208ENST00000512392 MCM10Q7L590 875 aa7.27□□□□□ -1.25
CHD1-208ENST00000512392 FGD2Q7Z6J4 655 aa7.27□□□□□ -1.25
CHD1-208ENST00000512392 NBPF5PQ86XG9 351 aaPredicted RBP7.27□□□□□ -1.25
CHD1-208ENST00000512392 FAM43AQ8N2R8 423 aa7.27□□□□□ -1.25
CHD1-208ENST00000512392 USP7Q93009 1102 aa7.27□□□□□ -1.25
CHD1-208ENST00000512392 VMP1Q96GC9 406 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 148.8 ms