RNA–Protein interactions for RNA: ENST00000512040.1

MATR3-219, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-219ENST00000512040 TRDNQ13061 729 aa5.11□□□□□ -1.59
MATR3-219ENST00000512040 FKBP5Q13451 457 aaPredicted RBP5.11□□□□□ -1.59
MATR3-219ENST00000512040 TOMM20Q15388 145 aa5.11□□□□□ -1.59
MATR3-219ENST00000512040 FXNQ16595 210 aa5.11□□□□□ -1.59
MATR3-219ENST00000512040 OCLNQ16625 522 aa5.11□□□□□ -1.59
MATR3-219ENST00000512040 TTC31Q49AM3 519 aaPredicted RBP5.11□□□□□ -1.59
MATR3-219ENST00000512040 C4orf17Q53FE4 359 aa5.11□□□□□ -1.59
MATR3-219ENST00000512040 COBLL1Q53SF7 1204 aa5.11□□□□□ -1.59
MATR3-219ENST00000512040 SPECC1Q5M775 1068 aa5.11□□□□□ -1.59
MATR3-219ENST00000512040 TRAPPC3LQ5T215 181 aa5.11□□□□□ -1.59
MATR3-219ENST00000512040 SH3PXD2AQ5TCZ1 1133 aa5.11□□□□□ -1.59
MATR3-219ENST00000512040 GPAT2Q6NUI2 795 aa5.11□□□□□ -1.59
MATR3-219ENST00000512040 CCBE1Q6UXH8 406 aaPredicted RBP5.11□□□□□ -1.59
MATR3-219ENST00000512040 EP400NLQ6ZTU2 488 aa5.11□□□□□ -1.59
MATR3-219ENST00000512040 RASSF3Q86WH2 238 aa5.11□□□□□ -1.59
MATR3-219ENST00000512040 KIAA0825Q8IV33 1275 aa5.11□□□□□ -1.59
MATR3-219ENST00000512040 RAVER1Q8IY67 606 aaKnown RBP5.11□□□□□ -1.59
MATR3-219ENST00000512040 MYOCDQ8IZQ8 938 aa5.11□□□□□ -1.59
MATR3-219ENST00000512040 RHBDD1Q8TEB9 315 aa5.11□□□□□ -1.59
MATR3-219ENST00000512040 MAML1Q92585 1016 aa5.11□□□□□ -1.59
MATR3-219ENST00000512040 N4BP2L2Q92802 583 aaPredicted RBP5.11□□□□□ -1.59
MATR3-219ENST00000512040 RNF34Q969K3 372 aa5.11□□□□□ -1.59
MATR3-219ENST00000512040 TBC1D31Q96DN5 1066 aa5.11□□□□□ -1.59
MATR3-219ENST00000512040 MMTAG2Q9BU76 263 aaKnown RBP5.11□□□□□ -1.59
MATR3-219ENST00000512040 NIFKQ9BYG3 293 aaKnown RBP5.11□□□□□ -1.59
MATR3-219ENST00000512040 IQCGQ9H095 443 aaKnown RBP5.11□□□□□ -1.59
MATR3-219ENST00000512040 ABCG4Q9H172 646 aa5.11□□□□□ -1.59
MATR3-219ENST00000512040 RBSNQ9H1K0 784 aa5.11□□□□□ -1.59
MATR3-219ENST00000512040 RPAP3Q9H6T3 665 aaPredicted RBP5.11□□□□□ -1.59
MATR3-219ENST00000512040 C12orf49Q9H741 205 aa5.11□□□□□ -1.59
MATR3-219ENST00000512040 PPCSQ9HAB8 311 aa5.11□□□□□ -1.59
MATR3-219ENST00000512040 BRMS1Q9HCU9 246 aa5.11□□□□□ -1.59
MATR3-219ENST00000512040 PTPRHQ9HD43 1115 aa5.11□□□□□ -1.59
MATR3-219ENST00000512040 SH3GLB2Q9NR46 395 aa5.11□□□□□ -1.59
MATR3-219ENST00000512040 CCDC87Q9NVE4 849 aa5.11□□□□□ -1.59
MATR3-219ENST00000512040 CXXC1Q9P0U4 656 aaPredicted RBP5.11□□□□□ -1.59
MATR3-219ENST00000512040 TPCN1Q9ULQ1 816 aa5.11□□□□□ -1.59
MATR3-219ENST00000512040 ZNF232Q9UNY5 417 aa5.11□□□□□ -1.59
MATR3-219ENST00000512040 RTCBQ9Y3I0 505 aaKnown RBP5.11□□□□□ -1.59
MATR3-219ENST00000512040 SOS1Q07889 1333 aaPredicted RBP5.11□□□□□ -1.59
MATR3-219ENST00000512040 RAD50Q92878 1312 aa5.11□□□□□ -1.59
MATR3-219ENST00000512040 SCN4AP35499 1836 aa5.11□□□□□ -1.59
MATR3-219ENST00000512040 CCDC196A0A1B0GTZ2 297 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 SHTN1A0MZ66 631 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 SERTM1A2A2V5 107 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 FOXN1O15353 648 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 PTCD1O75127 700 aaKnown RBP5.1□□□□□ -1.59
MATR3-219ENST00000512040 XBP1P17861 261 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 COL15A1P39059 1388 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 SH3BGRP55822 239 aaPredicted RBP5.1□□□□□ -1.59
MATR3-219ENST00000512040 PSMA6P60900 246 aaKnown RBP5.1□□□□□ -1.59
MATR3-219ENST00000512040 KRT83P78385 493 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 BIRC3Q13489 604 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 SMC1AQ14683 1233 aaKnown RBP5.1□□□□□ -1.59
MATR3-219ENST00000512040 NFIXQ14938 502 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.1□□□□□ -1.592e-45■□□□□ 10.5
MATR3-219ENST00000512040 USPL1Q5W0Q7 1092 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 PPP4R3AQ6IN85 833 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 ALKBH2Q6NS38 261 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 ZCCHC8Q6NZY4 707 aaKnown RBP5.1□□□□□ -1.59
MATR3-219ENST00000512040 CFAP161Q6P656 301 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 C16orf54Q6UWD8 224 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 TAX1BP1Q86VP1 789 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 ERC1Q8IUD2 1116 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 DNAJC10Q8IXB1 793 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 CCDC144CPQ8IYA2 1237 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 SPICE1Q8N0Z3 855 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 CPXCR1Q8N123 301 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 MICALL1Q8N3F8 863 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 Q8N3U1 123 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 PHC3Q8NDX5 983 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 ZDHHC1Q8WTX9 485 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 IRF7Q92985 503 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 KIFC2Q96AC6 838 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 AIDAQ96BJ3 306 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 TRIM47Q96LD4 638 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 GPR101Q96P66 508 aaPredicted RBP5.1□□□□□ -1.59
MATR3-219ENST00000512040 GSDMAQ96QA5 445 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 VPS33BQ9H267 617 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 PNNQ9H307 717 aaKnown RBP5.1□□□□□ -1.59
MATR3-219ENST00000512040 RMI1Q9H9A7 625 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 SLC52A2Q9HAB3 445 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 QPCTLQ9NXS2 382 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 LUZP4Q9P127 313 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 ZMAT5Q9UDW3 170 aaKnown RBP5.1□□□□□ -1.59
MATR3-219ENST00000512040 ZBTB1Q9Y2K1 713 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 SQORQ9Y6N5 450 aa5.1□□□□□ -1.59
MATR3-219ENST00000512040 KDM2BQ8NHM5 1336 aa5.09□□□□□ -1.59
MATR3-219ENST00000512040 GNAT3A8MTJ3 354 aa5.09□□□□□ -1.59
MATR3-219ENST00000512040 SPATA31C2B4DYI2 1134 aa5.09□□□□□ -1.59
MATR3-219ENST00000512040 FOXN3O00409 490 aaPredicted RBP5.09□□□□□ -1.59
MATR3-219ENST00000512040 KIAA0754O94854 1291 aa5.09□□□□□ -1.59
MATR3-219ENST00000512040 HMOX1P09601 288 aa5.09□□□□□ -1.59
MATR3-219ENST00000512040 FGRP09769 529 aa5.09□□□□□ -1.59
MATR3-219ENST00000512040 RAC2P15153 192 aa5.09□□□□□ -1.59
MATR3-219ENST00000512040 VCAM1P19320 739 aa5.09□□□□□ -1.59
MATR3-219ENST00000512040 HOXA10P31260 410 aaPredicted RBP5.09□□□□□ -1.59
MATR3-219ENST00000512040 TNNI2P48788 182 aa5.09□□□□□ -1.59
MATR3-219ENST00000512040 SESN3P58005 492 aa5.09□□□□□ -1.59
MATR3-219ENST00000512040 UBXN2AP68543 259 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms