RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 ZNF214Q9UL59 606 aaPredicted RBP22.6■■□□□ 1.21
SMAD1-211ENST00000512019 SLC15A5A6NIM6 579 aa22.59■■□□□ 1.21
SMAD1-211ENST00000512019 PRPF3O43395 683 aaKnown RBP22.59■■□□□ 1.21
SMAD1-211ENST00000512019 ICAM1P05362 532 aa22.59■■□□□ 1.21
SMAD1-211ENST00000512019 SNAP25P60880 206 aa22.59■■□□□ 1.21
SMAD1-211ENST00000512019 SSRP1Q08945 709 aaKnown RBP22.59■■□□□ 1.21
SMAD1-211ENST00000512019 ST3GAL1Q11201 340 aa22.59■■□□□ 1.21
SMAD1-211ENST00000512019 PLS1Q14651 629 aa22.59■■□□□ 1.21
SMAD1-211ENST00000512019 CPXCR1Q8N123 301 aa22.59■■□□□ 1.21
SMAD1-211ENST00000512019 PIBF1Q8WXW3 757 aa22.59■■□□□ 1.21
SMAD1-211ENST00000512019 PHKBQ93100 1093 aa22.59■■□□□ 1.21
SMAD1-211ENST00000512019 SPATC1LQ9H0A9 340 aa22.59■■□□□ 1.21
SMAD1-211ENST00000512019 RAVER2Q9HCJ3 691 aaKnown RBP22.59■■□□□ 1.21
SMAD1-211ENST00000512019 CCPG1Q9ULG6 757 aa22.59■■□□□ 1.21
SMAD1-211ENST00000512019 STK36Q9NRP7 1315 aa22.58■■□□□ 1.21
SMAD1-211ENST00000512019 COPB2P35606 906 aa22.58■■□□□ 1.21
SMAD1-211ENST00000512019 STAT3P40763 770 aa22.58■■□□□ 1.21
SMAD1-211ENST00000512019 GRB14Q14449 540 aa22.58■■□□□ 1.21
SMAD1-211ENST00000512019 SNRNP48Q6IEG0 339 aaKnown RBP22.58■■□□□ 1.21
SMAD1-211ENST00000512019 FBXO11Q86XK2 927 aa22.58■■□□□ 1.21
SMAD1-211ENST00000512019 AMNQ9BXJ7 453 aa22.58■■□□□ 1.21
SMAD1-211ENST00000512019 V9GY48 417 aaPredicted RBP22.58■■□□□ 1.21
SMAD1-211ENST00000512019 ZNF536O15090 1300 aa22.57■■□□□ 1.2
SMAD1-211ENST00000512019 PTPDC1A2A3K4 754 aa22.57■■□□□ 1.2
SMAD1-211ENST00000512019 CTDNEP1O95476 244 aa22.57■■□□□ 1.2
SMAD1-211ENST00000512019 BMP8BP34820 402 aa22.57■■□□□ 1.2
SMAD1-211ENST00000512019 MAGEA10P43363 369 aaPredicted RBP22.57■■□□□ 1.2
SMAD1-211ENST00000512019 BECN1Q14457 450 aa22.57■■□□□ 1.2
SMAD1-211ENST00000512019 LRRC26Q2I0M4 334 aa22.57■■□□□ 1.2
SMAD1-211ENST00000512019 NSUN7Q8NE18 718 aaKnown RBP22.57■■□□□ 1.2
SMAD1-211ENST00000512019 hCG_1984214I3L0E3 225 aa22.56■■□□□ 1.2
SMAD1-211ENST00000512019 DEXIO95424 95 aa22.56■■□□□ 1.2
SMAD1-211ENST00000512019 SLC25A27O95847 323 aa22.56■■□□□ 1.2
SMAD1-211ENST00000512019 CYP2C19P33261 490 aa22.56■■□□□ 1.2
SMAD1-211ENST00000512019 HMGN5P82970 282 aaKnown RBP22.56■■□□□ 1.2
SMAD1-211ENST00000512019 TKFCQ3LXA3 575 aa22.56■■□□□ 1.2
SMAD1-211ENST00000512019 MFSD14CQ5VZR4 134 aa22.56■■□□□ 1.2
SMAD1-211ENST00000512019 RIOX2Q8IUF8 465 aa22.56■■□□□ 1.2
SMAD1-211ENST00000512019 ZNF713Q8N859 430 aaPredicted RBP22.56■■□□□ 1.2
SMAD1-211ENST00000512019 TRPV1Q8NER1 839 aa22.56■■□□□ 1.2
SMAD1-211ENST00000512019 AGBL1Q96MI9 1066 aa22.56■■□□□ 1.2
SMAD1-211ENST00000512019 MOV10L1Q9BXT6 1211 aaKnown RBP22.56■■□□□ 1.2
SMAD1-211ENST00000512019 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.56■■□□□ 1.2
SMAD1-211ENST00000512019 IVNS1ABPQ9Y6Y0 642 aa22.56■■□□□ 1.2
SMAD1-211ENST00000512019 MYH6P13533 1939 aa22.55■■□□□ 1.2
SMAD1-211ENST00000512019 BAZ2BQ9UIF8 2168 aaKnown RBP22.55■■□□□ 1.2
SMAD1-211ENST00000512019 hCG_1642624A0A1W2PR95 340 aa22.55■■□□□ 1.2
SMAD1-211ENST00000512019 HOXC6P09630 235 aa22.55■■□□□ 1.2
SMAD1-211ENST00000512019 SCG2P13521 617 aa22.55■■□□□ 1.2
SMAD1-211ENST00000512019 ANP32AP39687 249 aaKnown RBP22.55■■□□□ 1.2
SMAD1-211ENST00000512019 CUL4AQ13619 759 aa22.55■■□□□ 1.2
SMAD1-211ENST00000512019 PFKFB3Q16875 520 aaPredicted RBP22.55■■□□□ 1.2
SMAD1-211ENST00000512019 USH1GQ495M9 461 aa22.55■■□□□ 1.2
SMAD1-211ENST00000512019 SHCBP1Q8NEM2 672 aa22.55■■□□□ 1.2
SMAD1-211ENST00000512019 WASF1Q92558 559 aa22.55■■□□□ 1.2
SMAD1-211ENST00000512019 ORC3Q9UBD5 711 aaPredicted RBP22.55■■□□□ 1.2
SMAD1-211ENST00000512019 LAMA3Q16787 3333 aa22.55■■□□□ 1.2
SMAD1-211ENST00000512019 ABCB11O95342 1321 aa22.55■■□□□ 1.2
SMAD1-211ENST00000512019 PPFIA3O75145 1194 aa22.54■■□□□ 1.2
SMAD1-211ENST00000512019 CNGA1P29973 690 aa22.54■■□□□ 1.2
SMAD1-211ENST00000512019 SLC4A3P48751 1232 aa22.54■■□□□ 1.2
SMAD1-211ENST00000512019 HEATR3Q7Z4Q2 680 aa22.54■■□□□ 1.2
SMAD1-211ENST00000512019 FBXO40Q9UH90 709 aa22.54■■□□□ 1.2
SMAD1-211ENST00000512019 PCDHA1Q9Y5I3 950 aa22.54■■□□□ 1.2
SMAD1-211ENST00000512019 PLXNA1Q9UIW2 1896 aa22.54■■□□□ 1.2
SMAD1-211ENST00000512019 JAK2O60674 1132 aa22.53■■□□□ 1.2
SMAD1-211ENST00000512019 PPP1R11O60927 126 aaPredicted RBP22.53■■□□□ 1.2
SMAD1-211ENST00000512019 IGHA2P01877 340 aa22.53■■□□□ 1.2
SMAD1-211ENST00000512019 ALAS1P13196 640 aa22.53■■□□□ 1.2
SMAD1-211ENST00000512019 NCAPG2Q86XI2 1143 aa22.53■■□□□ 1.2
SMAD1-211ENST00000512019 CHST13Q8NET6 341 aa22.53■■□□□ 1.2
SMAD1-211ENST00000512019 SMARCC2Q8TAQ2 1214 aa22.53■■□□□ 1.2
SMAD1-211ENST00000512019 MROH8Q9H579 483 aa22.53■■□□□ 1.2
SMAD1-211ENST00000512019 TSHZ2Q9NRE2 1034 aa22.53■■□□□ 1.2
SMAD1-211ENST00000512019 DDX20Q9UHI6 824 aaKnown RBP22.53■■□□□ 1.2
SMAD1-211ENST00000512019 MRPL11Q9Y3B7 192 aaKnown RBP22.53■■□□□ 1.2
SMAD1-211ENST00000512019 KIF3AQ9Y496 699 aa22.53■■□□□ 1.2
SMAD1-211ENST00000512019 DNAH12Q6ZR08 3092 aa22.52■■□□□ 1.2
SMAD1-211ENST00000512019 HSP90AA1P07900 732 aaKnown RBP22.52■■□□□ 1.2
SMAD1-211ENST00000512019 ERCC3P19447 782 aa22.52■■□□□ 1.2
SMAD1-211ENST00000512019 ADORA2AP29274 412 aa22.52■■□□□ 1.2
SMAD1-211ENST00000512019 PKN1Q16512 942 aa22.52■■□□□ 1.2
SMAD1-211ENST00000512019 PPP1R18Q6NYC8 613 aa22.52■■□□□ 1.2
SMAD1-211ENST00000512019 CCDC12Q8WUD4 166 aaPredicted RBP22.52■■□□□ 1.2
SMAD1-211ENST00000512019 GPKOWQ92917 476 aaPredicted RBP eCLIP22.52■■□□□ 1.2
SMAD1-211ENST00000512019 DDX11Q96FC9 970 aa22.52■■□□□ 1.2
SMAD1-211ENST00000512019 INTS4Q96HW7 963 aaKnown RBP22.52■■□□□ 1.2
SMAD1-211ENST00000512019 TRERF1Q96PN7 1200 aa22.52■■□□□ 1.2
SMAD1-211ENST00000512019 HOMER2Q9NSB8 354 aa22.52■■□□□ 1.2
SMAD1-211ENST00000512019 RNF146Q9NTX7 359 aa22.52■■□□□ 1.2
SMAD1-211ENST00000512019 BARHL2Q9NY43 387 aa22.52■■□□□ 1.2
SMAD1-211ENST00000512019 COBLO75128 1261 aa22.51■■□□□ 1.19
SMAD1-211ENST00000512019 CYBAP13498 195 aa22.51■■□□□ 1.19
SMAD1-211ENST00000512019 WWC2Q6AWC2 1192 aa22.51■■□□□ 1.19
SMAD1-211ENST00000512019 DPP9Q86TI2 863 aa22.51■■□□□ 1.19
SMAD1-211ENST00000512019 FAM184AQ8NB25 1140 aa22.51■■□□□ 1.19
SMAD1-211ENST00000512019 SENP6Q9GZR1 1112 aaPredicted RBP22.51■■□□□ 1.19
SMAD1-211ENST00000512019 ACAD9Q9H845 621 aa22.51■■□□□ 1.19
SMAD1-211ENST00000512019 SMC3Q9UQE7 1217 aa22.51■■□□□ 1.19
SMAD1-211ENST00000512019 RIPK3Q9Y572 518 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms